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Soil microbial functional profiles of P-cycling reveal drought-induced constraints on P-transformation in a hyper-arid desert ecosystem
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Gao, Yanju (Chinese Academy of Sciences. Institute of Ecology and Geography) ;
Tariq, Akash (Chinese Academy of Sciences. Xinjiang Institute of Ecology and Geography) ;
Zeng, Fanjiang (Chinese Academy of Sciences. Institute of Ecology and Geography) ;
Sardans i Galobart, Jordi (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Graciano, Corina (Universidad Nacional de La Plata. Instituto de Fisiología Vegetal) ;
Li, Xiangyi (Cele National Station of Observation and Research for Desert-Grassland Ecosystems) ;
Wang, Weiqi (Fujian Normal University. Key Laboratory of Humid Subtropical Eco-geographical Process) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals)
Soil water conditions are known to influence soil nutrient availability, but the specific impact of different conditions on soil phosphorus (P) availability through the modulation of P-cycling functional microbial communities in hyper-arid desert ecosystems remains largely unexplored. [...]
2024 -  10.1016/j.scitotenv.2024.171767
Science of the total environment, Vol. 925 (May 2024) , art. 171767
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8 p, 1.4 MB |
Improving the assessment of ecosystem and wildlife health : microbiome as an early indicator
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Puig Ribas, Maria (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
García-Ulloa, Manuel (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Espunyes, Johan (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Cabezón Ponsoda, Óscar (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals)
Human activities are causing dramatic declines in ecosystem health, compromising the functioning of the life-support system, economic activity, and animal and human health. In this context, monitoring the health of ecosystems and wildlife populations is crucial for determining ecological dynamics and assessing management interventions. [...]
2023 - 10.1016/j.copbio.2023.102923
Current opinion in biotechnology, Vol. 81 (2023) , art. 102923
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12 p, 47.1 MB |
A metagenomic and amplicon sequencing combined approach reveals the best primers to study marine aerobic anoxygenic phototrophs
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Gazulla, Carlota R. (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Cabello, Ana María (Instituto Español de Oceanografía. Centro Oceanográfico de Málaga) ;
Sanchez, Pablo (Institut de Ciències del Mar) ;
Gasol, Josep M. (Institut de Ciències del Mar) ;
Sánchez Martínez, M. Olga (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Ferrera, Isabel (Instituto Español de Oceanografía. Centro Oceanográfico de Málaga)
Studies based on protein-coding genes are essential to describe the diversity within bacterial functional groups. In the case of aerobic anoxygenic phototrophic (AAP) bacteria, the pufM gene has been established as the genetic marker for this particular functional group, although available primers are known to have amplification biases. [...]
2023 - 10.1007/s00248-023-02220-y
Microbial Ecology, Vol. 86, Issue 3 (October 2023) , p. 2161-2172
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15 p, 348.7 KB |
Bioinformatic Tools for NGS-Based Metagenomics to Improve the Clinical Diagnosis of Emerging, Re-Emerging and New Viruses
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Ibañez-Lligoña, Marta (Universitat Autònoma de Barcelona. Departament de Bioquímica i de Biologia Molecular) ;
Colomer-Castell, Sergi (Universitat Autònoma de Barcelona. Departament de Bioquímica i de Biologia Molecular) ;
González-Sánchez, Alejandra (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Gregori i Font, Josep (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Campos, Carolina (Universitat Autònoma de Barcelona. Departament de Bioquímica i de Biologia Molecular) ;
Garcia-Cehic, D (Centro de Investigación Biomédica en Red de Enfermedades Hepáticas y Digestivas) ;
Andrés, Cristina (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Piñana, Maria (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Pumarola Suñé, Tomàs (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Rodríguez Frías, Francisco (Universitat Internacional de Catalunya) ;
Antón, Andrés (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Quer, Josep 1963- (Universitat Autònoma de Barcelona. Departament de Bioquímica i de Biologia Molecular)
Epidemics and pandemics have occurred since the beginning of time, resulting in millions of deaths. Many such disease outbreaks are caused by viruses. Some viruses, particularly RNA viruses, are characterized by their high genetic variability, and this can affect certain phenotypic features: tropism, antigenicity, and susceptibility to antiviral drugs, vaccines, and the host immune response. [...]
2023 - 10.3390/v15020587
Viruses, Vol. 15, Issue 2 (February 2023) , art. 587
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22 p, 2.7 MB |
Effect of Resistant Dextrin on Intestinal Gas Homeostasis and Microbiota
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Barber, Claudia (Universitat Autònoma de Barcelona. Departament de Medicina) ;
Sabater, Carlos (Health Research Institute of Asturias) ;
Ávila-Gálvez, María Ángeles (Laboratory of Food & Health, Group of Quality, Safety, and Bioactivity of Plant Foods (Múrcia)) ;
Vallejo, Fernando (Metabolomics Service (Múrcia)) ;
Bendezú García, Rogger Álvaro (Hospital General de Catalunya) ;
Guérin-Deremaux, Laetitia (Roquette Frères) ;
Guarner, Francisco (Hospital Universitari Vall d'Hebron) ;
Espín, Juan Carlos (Laboratory of Food & Health, Group of Quality, Safety, and Bioactivity of Plant Foods (Múrcia)) ;
Margolles, Abelardo (Health Research Institute of Asturias) ;
Azpiroz Vidaur, Fernando (Universitat Autònoma de Barcelona. Departament de Medicina)
Previous studies have shown that a resistant dextrin soluble fibre has prebiotic properties with related health benefits on blood glucose management and satiety. Our aim was to demonstrate the effects of continuous administration of resistant dextrin on intestinal gas production, digestive sensations, and gut microbiota metabolism and composition. [...]
2022 - 10.3390/nu14214611
Nutrients, Vol. 14 (november 2022)
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14 p, 1.7 MB |
Novel strategies to improve chicken performance and welfare by unveiling host-microbiota interactions through hologenomics
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Tous, Núria (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal) ;
Marcos, Sofia (University of the Basque Country. Applied Genomics and Bioinformatics) ;
Goodarzi Boroojeni, Farshad (Freie Universität Berlin. Department of Veterinary Medicine) ;
Pérez de Rozas, Ana (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal) ;
Zentek, Jürgen (Freie Universität Berlin. Department of Veterinary Medicine) ;
Estonba, Andone (University of the Basque Country. Applied Genomics and Bioinformatics) ;
Sandvang, Dorthe (Animal Health Innovation) ;
Gilbert, M. Thomas P. (Norwegian University of Science and Technology) ;
Esteve-Garcia, Enric (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal) ;
Finn, Robert (European Bioinformatics Institute) ;
Alberdi, Antton (University of Copenhagen. Center for Evolutionary Hologenomics) ;
Tarradas, Joan (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal)
Fast optimisation of farming practices is essential to meet environmental sustainability challenges. Hologenomics, the joint study of the genomic features of animals and the microbial communities associated with them, opens new avenues to obtain in-depth knowledge on how host-microbiota interactions affect animal performance and welfare, and in doing so, improve the quality and sustainability of animal production. [...]
2022 - 10.3389/fphys.2022.884925
Frontiers in physiology, Vol. 13 (september 2022)
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11 p, 2.7 MB |
Assessment of global health risk of antibiotic resistance genes
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Zhang, Zhenyan (Zhejiang University of Technology. College of Environment) ;
Zhang, Qi (Zhejiang University of Technology. College of Environment) ;
Wang, Tingzhang (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Xu, Nuohan (Zhejiang University of Technology. College of Environment) ;
Lu, Tao (Zhejiang University of Technology. College of Environment) ;
Hong, Wenjie (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Gillings, Michael (Macquarie University. ARC Centre of Excellence in Synthetic Biology) ;
Wang, Meixia (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Gao, Wenwen (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Qian, Haifeng (Zhejiang University of Technology. College of Environment)
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health in the last decade. Many genes can confer resistance, but evaluating the relative health risks of ARGs is complex. [...]
2022 - 10.1038/s41467-022-29283-8
Nature communications, Vol. 13 (March 2022) , art. 1553
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