3bfa11dca6ed43a44452fb0bbeace286 bmcmedgen_a2012m10v15n44.pdf 76079b99bba2c7d738b7fffe70b57dcbc640661d bmcmedgen_a2012m10v15n44.pdf 40fdc47ecb72ad89d9c5fa053dec6c64bf4cac37def723c0fece5abe1c83681b bmcmedgen_a2012m10v15n44.pdf Title: PAM50 Breast Cancer Subtyping by RT-qPCR and Concordance with Standard Clinical Molecular Markers Creator: Arbortext Advanced Print Publisher 9.1.440/W Unicode Producer: Acrobat Distiller 10.0.0 (Windows) CreationDate: Fri Nov 2 06:08:41 2012 ModDate: Fri Nov 2 06:09:28 2012 Tagged: no Pages: 12 Encrypted: no Page size: 595.276 x 793.701 pts File size: 937620 bytes Optimized: yes PDF version: 1.3 name type emb sub uni object ID ------------------------------------ ----------------- --- --- --- --------- JBFBOA+AdvTTaf7f9f4f.B Type 1C yes yes no 403 0 JBFBOB+AdvTTe45e47d2 Type 1C yes yes no 404 0 JBFBOC+AdvTTb5929f4c Type 1C yes yes no 405 0 JBFBPC+AdvTTb5929f4c+20 Type 1C yes yes no 406 0 JBFBPD+AdvTT99c4c969 Type 1C yes yes no 407 0 JBFBPE+AdvTT1b53b5fb.I 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0 Jhove (Rel. 1.4, 2009-07-30) Date: 2013-10-25 22:52:50 GMT+01:00 RepresentationInformation: bmcmedgen_a2012m10v15n44.pdf ReportingModule: PDF-hul, Rel. 1.8 (2009-05-22) LastModified: 2013-10-25 12:48:11 GMT+01:00 Size: 937620 Format: PDF Version: 1.3 Status: Well-Formed, but not valid SignatureMatches: PDF-hul ErrorMessage: Invalid destination object Offset: 920728 ErrorMessage: Invalid destination object Offset: 920728 MIMEtype: application/pdf Profile: Linearized PDF PDFMetadata: Objects: 432 FreeObjects: 1 IncrementalUpdates: 1 DocumentCatalog: PageLayout: SinglePage PageMode: UseNone Outlines: Item: Title: Abstract Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@27431340 Children: Item: Title: Background Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@24a4e2e3 Item: Title: Methods Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@452bb7e0 Item: Title: Results Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@3934f69a Item: Title: Conclusions Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@442a15cd Item: Title: Background Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@26fd68b1 Item: Title: Methods Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@46e45076 Children: Item: Title: Samples and clinical data Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@375e9756 Item: Title: Measurement of PCR efficiency, limits of detection, and limits of quantification Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@2321ab80 Item: Title: Selection of prototype samples for the RT-qPCR training set Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@77827284 Item: Title: 10-Fold cross validation to determine stability of selected prototypes Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@152c7568 Item: Title: Measurements of assay reproducibility Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@19d009b4 Item: Title: Scaling single and Meta-Gene scores Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@292d15a9 Item: Title: Results Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4ee91f5d Children: Item: Title: Training set, subtype stability, and classification accuracy Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@2b0a3b24 Item: Title: Interference from normal breast tissue contamination Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@2cb0ce8f Item: Title: Subtype, immunohistochemistry, and RT-qPCR gene scores Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@bc92535 Item: Title: Prognostic significance of gene expression versus standard methods for ER and HER2 status Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@42a9c09e Item: Title: Discussion Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@16a4e743 Item: Title: Conclusions Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@244aeb52 Item: Title: Additional files Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@329f671b Item: Title: Competing interests Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@7f2a3793 Item: Title: Authors’ contributions Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@2ca6d51e Item: Title: Acknowledgements Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@7cf1bb78 Item: Title: Author details Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@624b035d Item: Title: References Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@2aca0115 Info: Title: PAM50 Breast Cancer Subtyping by RT-qPCR and Concordance with Standard Clinical Molecular Markers Creator: Arbortext Advanced Print Publisher 9.1.440/W Unicode Producer: Acrobat Distiller 10.0.0 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Carole A Davis Ignacio Aranda Christiane Fauron Inge J Stijleman Jos� Palacios Antonio Ant�n Eva Carrasco Rosal�a Caballero Matthew J Ellis Torsten O Nielsen Charles M Perou Mark Astill Philip S Bernard Miguel Mart�n PAM50 Breast Cancer Subtyping by RT-qPCR and Concordance with Standard Clinical Molecular Markers BMC Medical Genomics 2012, 5:1. doi:10.1186/1755-8794-5-44 BMC Medical Genomics 2012-10-04 � 2012 Bastien et al.; licensee BioMed Central Ltd. True BMC Medical Genomics 10.1186/1755-8794-5-44 1 1 1 � 2012 Bastien et al.; licensee BioMed Central Ltd. 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