346c895f64892025acde4207c9899f52 pmc_27297662.pdf a329ee6dad2728a37919dfa48f1b9a5a467d835b pmc_27297662.pdf 0d1cdbd950cf1e5e524141cd6c2b9aca7a59f2ab31f4d77be7ffd72889aa4b44 pmc_27297662.pdf Title: Homeobox NKX2-3 promotes marginal-zone lymphomagenesis by activating B-cell receptor signalling and shaping lymphocyte dynamics Subject: Nature Communications 7, (2016). doi:10.1038/ncomms11889 Author: Eloy F. Robles Creator: Arbortext Advanced Print Publisher 9.0.226/W Producer: Acrobat Distiller 8.1.0 (Windows) CreationDate: Fri Jun 3 14:26:07 2016 CEST ModDate: Tue Jun 7 15:44:06 2016 CEST Tagged: no UserProperties: no Suspects: no Form: AcroForm JavaScript: no Pages: 16 Encrypted: no Page size: 595.276 x 782.362 pts Page rot: 0 File size: 4521456 bytes Optimized: yes PDF version: 1.6 name type encoding emb sub uni object ID ------------------------------------ ----------------- ---------------- --- --- --- --------- OBGHBF+AdvOTea1a7398 Type 1C Custom yes yes yes 541 0 OBGHBG+AdvEls-ent2 Type 1C WinAnsi yes yes no 542 0 OBGHCH+AdvOT9bd21c25.I Type 1C Custom yes yes yes 550 0 OBGHCI+AdvPi1 Type 1C WinAnsi yes yes no 551 0 OBGHCJ+AdvOTcb88df00 Type 1C Custom yes yes yes 558 0 OBGHGI+Arial-BoldMT Type 1C WinAnsi yes yes no 559 0 OBGHJI+AdvOTf23bb480 Type 1C Custom yes yes yes 560 0 OBGIBG+AdvTTda6f6cb8.B Type 1C Custom yes yes yes 569 0 OBGIHI+AdvOT7d6df7ab.I Type 1C Custom yes yes yes 288 0 OBGIIJ+AdvOT45bf69de.BI Type 1C Custom yes yes yes 301 0 OBGIIK+AdvOTb65e897d.B Type 1C Custom yes yes yes 302 0 OBGIJK+AdvPi2 Type 1C WinAnsi yes yes no 297 0 OBGIHF+AdvOT125c650c Type 1C Custom yes yes yes 282 0 OBGIHG+AdvOT1ef757c0 Type 1C Custom yes yes yes 289 0 OBGIHH+AdvP4C4E74 Type 1C Custom yes yes yes 290 0 OBIEMO+Helvetica-Bold Type 1C WinAnsi yes yes no 318 0 OBIENP+Helvetica Type 1C WinAnsi yes yes no 315 0 OBIEOP+Helvetica-Oblique Type 1C WinAnsi yes yes no 308 0 OBIEPA+Symbol Type 1C Custom yes yes yes 323 0 OBILLI+AdvOTe75a9404.I Type 1C Custom yes yes yes 312 0 OBMIKC+AdvGreek_B Type 1C WinAnsi yes yes no 329 0 OBMIKD+AdvEls-ent4 Type 1C WinAnsi yes yes no 325 0 OCCKCN+AdvItcSymbol-M Type 1C WinAnsi yes yes no 339 0 OCGPNC+AdvEls-ent7 Type 1C WinAnsi yes yes no 348 0 OCGPPC+Advsymbol Type 1C Custom yes yes no 349 0 Jhove (Rel. 1.22.1, 2019-04-17) Date: 2023-02-16 03:01:48 CET RepresentationInformation: pmc_27297662.pdf ReportingModule: PDF-hul, Rel. 1.12.1 (2019-04-17) LastModified: 2018-02-06 08:59:33 CET Size: 4521456 Format: PDF Version: 1.6 Status: Well-Formed and valid SignatureMatches: PDF-hul MIMEtype: application/pdf Profile: Linearized PDF PDFMetadata: Objects: 595 FreeObjects: 1 IncrementalUpdates: 1 DocumentCatalog: PageLayout: SinglePage PageMode: UseNone Outlines: Item: Title: title_link Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4d3167f4 Children: Item: Title: Results Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@ed9d034 Children: Item: Title: NKX2-3 expression in marginal-zone B- cell &!QJ;lymphomas Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@6121c9d6 Item: Title: Characterization of NKX2-3 deficiency in B cells Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@87f383f Item: Title: NKX2-3 promotes expansion of splenic marginal-zone B cells Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4eb7f003 Item: Title: Figure™1NKX2-3 expression is deregulated in marginal-zone B- cell lymphomas.(a) Partial G- banded karyotype showing a t(10;14)(q24;q32) translocation in a patient with SMZL (case 1). Arrows mark the derivative chromosomes 10 and 14. (b,d) Interphase FISH Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@eafc191 Item: Title: Figure™2Nkx2-3-sol- and Emgr-NKX2-3 transgenic (TG) mice show abnormal lymphopoiesis.(a) Murine Nkx2-3 expression measured by quantitative RT-PCR in haematopoietic cell subpopulations isolated from healthy C57BLsol6 mice. Haematopoietic stem cells (HSC, l Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@612fc6eb Children: Item: Title: Emgr-NKX2-3 mice develop human-like marginal-zone lymphomas Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@1060b431 Item: Title: NKX2-3 induces constitutive BCR signalling in young mice Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@612679d6 Item: Title: Figure™3Emgr-NKX2-3 mice develop human-like marginal-zone lymphomas.(a) Kaplan-Meier overall survival curves for the two Emgr-NKX2-3 transgenic lines and WT mice. (b) Haematoxilin-eosin (H&E) staining of formalin-fixed paraffin-embedded spleen tissues of Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@11758f2a Children: Item: Title: NKX2-3 regulates B cells dynamics in lymphoid tissues Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@e720b71 Item: Title: Figure™4NKX2-3 induces B- cell receptor signalling in B cells from young mice.(a) Cell survival of in™vitro cell cultures containing isolated CD19+ cells from WT and transgenic (TG) mice. Data from three experiments are shown. (b) BrdU staining of WT and Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@1b26f7b2 Children: Item: Title: NKX2-3-expressing B cells are sensitive to BCR blockade Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@491cc5c9 Item: Title: Discussion Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@74ad1f1f Item: Title: Figure™5NKX2-3 induces activation of BCR and downstream signalling pathways in mouse B- cell lymphomas.(a) Western blot analysis showed increase in AKT phosphorylation levels in splenic CD19+ cells isolated from 18-month-old transgenic (TG) mice in compar Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@6a1aab78 Item: Title: Methods Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@462d5aee Children: Item: Title: Human primary samples Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@69b0fd6f Item: Title: Long-distance inverse PCR Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@757942a1 Item: Title: Quantitative real-time PCR Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4a87761d Item: Title: Figure™6Phenotypic analysis and characterization of cell dynamics in NKX2-3-expressing B cells.(a) Representative flow cytometry profiles (grey filled histogram) of forward side scatter (FSC) and the indicated molecules at the surface of WT B cells and NK Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@66d1af89 Item: Title: Figure™7Functional characterization of cell dynamic changes in Emgr-NKX2-3 transgenic mice.(a) Migration frequencies of transgenic B cells non-treated (none) or treated with the indicated chemical inhibitors (AMD, CXCR4 antagonist, 10thinspmgrM; A286, LFA Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@8646db9 Children: Item: Title: Fluorescence in™situ hybridization Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@37374a5e Item: Title: Generation of NKX2-3 mAb Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4671e53b Item: Title: IHC and western blot analyses Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@2db7a79b Item: Title: Generation and characterization of NKX2-3-deficient mice and Emgr-NKX2-3 transgenic mice Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@6950e31 Item: Title: Mouse blood cell count Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@b7dd107 Item: Title: Measurement of spleen size using ultrasounds Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@42eca56e Item: Title: Flow cytometry analyses Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@52f759d7 Item: Title: Cell isolation Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@7cbd213e Item: Title: Cell survival and proliferation Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@192d3247 Item: Title: V(D)J Recombination analysis of mouse B- cell tumours Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@3ecd23d9 Item: Title: Gene expression microarray data analysis Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@569cfc36 Item: Title: Functional and pathway analysis of gene expression signatures Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@43bd930a Item: Title: High-resolution comparative genomic hybridization (aCGH) to microarray Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@33723e30 Item: Title: Chemotaxis assays Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@64f6106c Item: Title: Calcium mobilization assay Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@553a3d88 Item: Title: Adhesion assays and time-lapse microscopy on planar lipid bilayers Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@7a30d1e6 Item: Title: IF studies Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@5891e32e Item: Title: Chemical inhibitors Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@cb0ed20 Item: Title: Electrophoretic mobility gel shift array Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@8e24743 Item: Title: Statistical analysis Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@74a10858 Item: Title: McGinnisW.KrumlaufR.Homeobox genes and axial patterningCell682833021992Garcia-FernandezJ.The genesis and evolution of homeobox gene clustersNat. Rev. Genet.68818922005BibenC.WangC. C.HarveyR. P.NK-2 class homeobox genes and pharyngealsoloral patterning: N Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@23fe1d71 Item: Title: We thank Jerry Adams (WEHI, Melbourne, Australia) for providing the pEmgrSR vector, Vincent Dubus (Genoway, Lyon, France) for support during transgenic mouse generation, Carlos Ortiz de Solorzano (CIMA, Pamplona, Spain) for spleen ultrasound studies in mi Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@28ac3dc3 Item: Title: ACKNOWLEDGEMENTS Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@32eebfca Item: Title: Author contributions Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4e718207 Item: Title: Additional information Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@1d371b2d Info: Title: Homeobox NKX2-3 promotes marginal-zone lymphomagenesis by activating B-cell receptor signalling and shaping lymphocyte dynamics Author: Eloy F. 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FontDescriptor: FontName: OBILLI+AdvOTe75a9404.I Flags: Symbolic FontBBox: -83, -197, 1020, 833 FontFile3: true EncodingDictionary: Differences: true ToUnicode: true Font: BaseFont: OBGIBG+AdvTTda6f6cb8.B FontSubset: true FirstChar: 48 LastChar: 57 FontDescriptor: FontName: OBGIBG+AdvTTda6f6cb8.B Flags: Serif, Symbolic FontBBox: -93, -218, 1000, 875 FontFile3: true EncodingDictionary: Differences: true ToUnicode: true Font: BaseFont: OBIENP+Helvetica FontSubset: true FirstChar: 32 LastChar: 215 FontDescriptor: FontName: OBIENP+Helvetica Flags: Nonsymbolic FontBBox: -166, -225, 1000, 931 FontFile3: true Encoding: WinAnsiEncoding Font: BaseFont: OBIEMO+Helvetica-Bold FontSubset: true FirstChar: 97 LastChar: 105 FontDescriptor: FontName: OBIEMO+Helvetica-Bold Flags: Nonsymbolic, ForceBold FontBBox: -170, -228, 1003, 962 FontFile3: true Encoding: WinAnsiEncoding XMP: application/pdf doi:10.1038/ncomms11889 Eloy F. Robles Maria Mena-Varas Laura Barrio Sara V. Merino-Cortes Péter Balogh Ming-Qing Du Takashi Akasaka Anton Parker Sergio Roa Carlos Panizo Idoia Martin-Guerrero Reiner Siebert Victor Segura Xabier Agirre Laura Macri-Pellizeri Beatriz Aldaz Amaia Vilas-Zornoza Shaowei Zhang Sarah Moody Maria Jose Calasanz Thomas Tousseyn Cyril Broccardo Pierre Brousset Elena Campos-Sanchez Cesar Cobaleda Isidro Sanchez-Garcia Jose Luis Fernandez-Luna Ricardo Garcia-Muñoz Esther Pena Beatriz Bellosillo Antonio Salar Maria Joao Baptista Jesús Maria Hernandez-Rivas Marcos Gonzalez Maria Jose Terol Joan Climent Antonio Ferrandez Xavier Sagaert Ari M. Melnick Felipe Prosper David G. Oscier Yolanda R. Carrasco Martin J. S. Dyer Jose A. Martinez-Climent Nature Communications 7, (2016). doi:10.1038/ncomms11889 Nature Publishing Group © 2016 Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. Homeobox NKX2-3 promotes marginal-zone lymphomagenesis by activating B-cell receptor signalling and shaping lymphocyte dynamics Acrobat Distiller 8.1.0 (Windows) © 2016 Nature Publishing Group, a division of Macmillan Publishers Limited. 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