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Title:           Transcriptomic analyses reveal groups of co-expressed, syntenic lncRNAs in four species of the genus
Subject:         RNA Biology, 2019. doi:10.1080/15476286.2019.1572438
Keywords:        Lncrna; Caenorhabditis; synteny; secondary structure; motifs
Author:          Cinta Pegueroles
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     Item: 
      Title: Results and discussion
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      Children: 
       Item: 
        Title: De novo annotation of intergenic lncRNA in nematodes
        Destination: 1
       Item: 
        Title: Synteny as aproxy to identify homologous lncRNAs
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       Item: 
        Title: Identification of conservedmicroRNAs and sequence motifs across syntenic families
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        Title: Structural conservation of syntenic lncRNAs
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      Title: Characterization of syntenic lncRNA families in the context of genome-wide alignments
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      Title: Concluding remarks
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      Title: Materials and methods
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        Title: Worm propagation
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       Item: 
        Title: Total RNA extraction and polyA selection
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       Item: 
        Title: Library preparation and sequencing
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       Item: 
        Title: Transcriptome assembly and de novo annotation of intergenic lncRNA in nematodes
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       Item: 
        Title: Validation of lncRNA expression by semi-quantitative RT-PCR
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       Item: 
        Title: Classification of lncRNAs into blast-based families
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       Item: 
        Title: Classification of lncRNA into secondary structure based families
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       Item: 
        Title: Classification of protein-coding genes and lncRNA into syntenic families
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       Item: 
        Title: Sequence conservation and motifs
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       Item: 
        Title: Identification of conserved structures within lncRNAs
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       Item: 
        Title: Identification of the syntenic families in genome-wide alignments
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      Title: Acknowledgments
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   Type: CRC32
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