1307117bd6f195d86faef09ed900b50e pmc_30982767.pdf 4305b53ef76db399302be9119363b37442de8acb pmc_30982767.pdf 9c8ae46f6fbdf71023cc22ef13a2dc4f65ceffcdc814cad7ce83c801397fe4f8 pmc_30982767.pdf Title: APOA1 oxidation is associated to dysfunctional high-density lipoproteins in human abdominal aortic aneurysm Creator: Elsevier Producer: Acrobat Distiller 11.0 (Windows) CreationDate: Thu May 23 17:46:36 2019 CEST ModDate: Thu May 23 17:51:16 2019 CEST Tagged: no UserProperties: no Suspects: no Form: none JavaScript: no Pages: 11 Encrypted: no Page size: 595.276 x 793.701 pts Page rot: 0 File size: 2705296 bytes Optimized: yes PDF version: 1.7 name type encoding emb sub uni object ID ------------------------------------ ----------------- ---------------- --- --- --- --------- LHFEFL+AdvTT5235d5a9 Type 1C WinAnsi yes yes no 727 0 LHFEFM+AdvTT5235d5a9+20 Type 1C Custom yes yes yes 728 0 LHFEFN+AdvTT94c8263f.I Type 1C WinAnsi yes yes no 729 0 LHFEFO+AdvTT0f485e03 Type 1C WinAnsi yes yes no 715 0 LHFEGP+AdvTT5235d5a9+fb Type 1C Custom yes yes yes 730 0 LHFEHA+AdvTT28000ce1.B Type 1C WinAnsi yes yes no 731 0 LHFEKP+AdvTTc8c83e50 Type 1C WinAnsi yes yes no 732 0 LHFEMC+AdvTT6b11a639.I Type 1C WinAnsi yes yes no 25 0 LHFENC+AdvTT94c8263f.I+20 Type 1C WinAnsi yes yes no 434 0 LHFEMA+AdvTT5235d5a9+22 Type 1C Custom yes yes yes 435 0 LHFEMB+AdvTT47a11158.B Type 1C WinAnsi yes yes no 26 0 LHFEOD+AdvTT5235d5a9+03 Type 1C Custom yes yes yes 436 0 LHFEOE+AdvTT454a7a89 Type 1C WinAnsi yes yes no 437 0 LHFEOF+AdvTT5235d5a9+01 Type 1C MacRoman yes yes no 44 0 LHFGEN+AdvTT94c8263f.I+fb Type 1C Custom yes yes yes 77 0 Jhove (Rel. 1.22.1, 2019-04-17) Date: 2020-08-10 12:47:02 CEST RepresentationInformation: pmc_30982767.pdf ReportingModule: PDF-hul, Rel. 1.12.1 (2019-04-17) LastModified: 2020-07-06 04:13:12 CEST Size: 2705296 Format: PDF Version: 1.7 Status: Well-Formed, but not valid SignatureMatches: PDF-hul ID: PDF-HUL-122 ErrorMessage: edu.harvard.hul.ois.jhove.module.pdf.PdfInvalidException: Invalid indirect destination - referenced object 'fn0005' cannot be found Offset: 2684367 ID: PDF-HUL-122 ErrorMessage: edu.harvard.hul.ois.jhove.module.pdf.PdfInvalidException: Invalid indirect destination - referenced object 'fn0005' cannot be found Offset: 2684367 ID: PDF-HUL-122 ErrorMessage: edu.harvard.hul.ois.jhove.module.pdf.PdfInvalidException: Invalid indirect destination - referenced object 'fn0005' cannot be found Offset: 2684367 ID: PDF-HUL-122 ErrorMessage: edu.harvard.hul.ois.jhove.module.pdf.PdfInvalidException: Invalid indirect destination - referenced object 'url2' cannot be found Offset: 2684367 ID: PDF-HUL-122 ErrorMessage: edu.harvard.hul.ois.jhove.module.pdf.PdfInvalidException: Invalid indirect destination - referenced object 'url3' cannot be found Offset: 2684367 MIMEtype: application/pdf Profile: Linearized PDF PDFMetadata: Objects: 783 FreeObjects: 1 IncrementalUpdates: 1 DocumentCatalog: PageLayout: SinglePage PageMode: UseOutlines Outlines: Item: Title: APOA1 oxidation is associated to dysfunctional high-„density lipoproteins in human abdominal aortic aneurysm Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@6121c9d6 Children: Item: Title: 1. Introduction Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@87f383f Item: Title: 2. Material and methods Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4eb7f003 Children: Item: Title: 2.1. Data statement Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@eafc191 Item: Title: 2.2. Tissue and tissue-conditioned medium Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@612fc6eb Item: Title: 2.3. HDL isolation Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@1060b431 Item: Title: Evidence before this study Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@612679d6 Item: Title: Added value of this study Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@11758f2a Item: Title: Implications of all the available evidence Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@e720b71 Children: Item: Title: 2.4. Plasmas Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@1b26f7b2 Item: Title: 2.5. Proteomics Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@491cc5c9 Children: Item: Title: 2.5.1. Sample preparation Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@74ad1f1f Item: Title: 2.5.2. LC-MS analysis Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@6a1aab78 Item: Title: 2.5.3. Database search Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@462d5aee Item: Title: 2.5.4. Comet-PTM Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@69b0fd6f Item: Title: 2.5.5. SHIFTS Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@757942a1 Item: Title: 2.5.6. Annotation of modifications Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4a87761d Item: Title: 2.5.7. Peptide quantification and statistical analysis Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@66d1af89 Item: Title: 2.6. Immunohistochemistry Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@8646db9 Item: Title: 2.7. Lipoprotein oxidation Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@37374a5e Item: Title: 2.8. Cholesterol efflux analyses Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4671e53b Item: Title: 2.9. Statistics Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@2db7a79b Item: Title: 3. Results Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@6950e31 Children: Item: Title: 3.1. Characterization of PTMs of HDL-like particles recovered from AAA tissue highlights APOA1 oxidation Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@b7dd107 Item: Title: 3.2. Incubation of plasmatic HDL with AAA tissue-conditioned medium produces APOA1 oxidation and impacts HDL functionality Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@42eca56e Item: Title: 3.3. Increased oxidized Trp50 and Trp108 of APOA1 in HDL incubated with PMN-conditioned medium and in plasma of patients with AAA Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@52f759d7 Item: Title: 4. Discussion Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@7cbd213e Children: Item: Title: 4.1. Limitations Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@192d3247 Item: Title: Funding Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@3ecd23d9 Item: Title: Declaration of interest Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@569cfc36 Item: Title: Author contributions Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@43bd930a Item: Title: Appendix A. Supplementary data Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@33723e30 Item: Title: References Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@64f6106c Info: Title: APOA1 oxidation is associated to dysfunctional high-density lipoproteins in human abdominal aortic aneurysm Creator: Elsevier Producer: Acrobat Distiller 11.0 (Windows) CreationDate: Thu May 23 18:16:36 CEST 2019 ModDate: Thu May 23 18:21:16 CEST 2019 ID: 0x41a8dcbcd6183be60da25a124fe0e4a2, 0x93ffaa34a54b87c436da7877781a4b30 Filters: FilterPipeline: FlateDecode FilterPipeline: DCTDecode Images: Image: NisoImageMetadata: FormatName: image/jpg CompressionScheme: JPEG ImageWidth: 689 ImageHeight: 178 ColorSpace: RGB BitsPerSample: 8 BitsPerSampleUnit: integer Image: NisoImageMetadata: FormatName: image/jpg CompressionScheme: JPEG ImageWidth: 248 ImageHeight: 272 ColorSpace: CMYK BitsPerSample: 8 BitsPerSampleUnit: integer Image: NisoImageMetadata: FormatName: image/jpg 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Subtype: Link Rect: 57, 547, 293, 554 Annotation: Subtype: Link Rect: 57, 539, 206, 546 Annotation: Subtype: Link Rect: 57, 531, 293, 538 Annotation: Subtype: Link Rect: 57, 523, 293, 530 Annotation: Subtype: Link Rect: 57, 515, 184, 522 Annotation: Subtype: Link Rect: 57, 507, 293, 514 Annotation: Subtype: Link Rect: 57, 499, 293, 506 Annotation: Subtype: Link Rect: 57, 491, 245, 498 Annotation: Subtype: Link Rect: 57, 483, 293, 490 Annotation: Subtype: Link Rect: 57, 475, 293, 482 Annotation: Subtype: Link Rect: 57, 467, 293, 474 Annotation: Subtype: Link Rect: 57, 459, 118, 466 Annotation: Subtype: Link Rect: 57, 451, 293, 458 Annotation: Subtype: Link Rect: 57, 444, 293, 450 Annotation: Subtype: Link Rect: 57, 436, 293, 442 Annotation: Subtype: Link Rect: 57, 428, 293, 434 Annotation: Subtype: Link Rect: 57, 420, 293, 426 Annotation: Subtype: Link Rect: 57, 412, 293, 418 Annotation: Subtype: Link Rect: 57, 404, 113, 410 Annotation: Subtype: Link Rect: 57, 396, 293, 402 Annotation: Subtype: Link Rect: 57, 388, 293, 394 Annotation: Subtype: Link Rect: 57, 380, 293, 386 Annotation: Subtype: Link Rect: 57, 372, 83, 378 Annotation: Subtype: Link Rect: 57, 364, 293, 370 Annotation: Subtype: Link Rect: 57, 356, 293, 362 Annotation: Subtype: Link Rect: 57, 348, 132, 354 Annotation: Subtype: Link Rect: 57, 340, 293, 346 Annotation: Subtype: Link Rect: 57, 332, 293, 338 Annotation: Subtype: Link Rect: 57, 324, 233, 330 Annotation: Subtype: Link Rect: 325, 730, 561, 737 Annotation: Subtype: Link Rect: 325, 722, 561, 729 Annotation: Subtype: Link Rect: 325, 715, 561, 721 Annotation: Subtype: Link Rect: 325, 707, 561, 713 Annotation: Subtype: Link Rect: 325, 699, 401, 705 Annotation: Subtype: Link Rect: 325, 691, 561, 697 Annotation: Subtype: Link Rect: 325, 683, 433, 689 Annotation: Subtype: Link Rect: 325, 675, 561, 681 Annotation: Subtype: Link Rect: 325, 667, 561, 673 Annotation: Subtype: Link Rect: 325, 659, 351, 665 Annotation: Subtype: Link Rect: 325, 651, 561, 657 Annotation: Subtype: Link Rect: 325, 643, 561, 649 Annotation: Subtype: Link Rect: 325, 635, 516, 641 Annotation: Subtype: Link Rect: 325, 627, 561, 633 Annotation: Subtype: Link Rect: 325, 619, 520, 625 Annotation: Subtype: Link Rect: 325, 611, 561, 617 Annotation: Subtype: Link Rect: 325, 603, 561, 609 Annotation: Subtype: Link Rect: 325, 595, 497, 601 Annotation: Subtype: Link Rect: 325, 587, 561, 593 Annotation: Subtype: Link Rect: 325, 579, 561, 585 Annotation: Subtype: Link Rect: 325, 571, 561, 577 Annotation: Subtype: Link Rect: 325, 563, 351, 569 Annotation: Subtype: Link Rect: 325, 555, 561, 561 Annotation: Subtype: Link Rect: 325, 547, 561, 554 Annotation: Subtype: Link Rect: 325, 539, 561, 546 Annotation: Subtype: Link Rect: 325, 531, 465, 538 Annotation: Subtype: Link Rect: 325, 523, 561, 530 Annotation: Subtype: Link Rect: 325, 515, 561, 522 Annotation: Subtype: Link Rect: 325, 507, 495, 514 Annotation: Subtype: Link Rect: 325, 499, 561, 506 Annotation: Subtype: Link Rect: 325, 491, 561, 498 Annotation: Subtype: Link Rect: 325, 483, 396, 490 Annotation: Subtype: Link Rect: 325, 475, 561, 482 Annotation: Subtype: Link Rect: 325, 467, 552, 474 Annotation: Subtype: Link Rect: 325, 459, 561, 466 Annotation: Subtype: Link Rect: 325, 451, 561, 458 Annotation: Subtype: Link Rect: 325, 444, 561, 450 Annotation: Subtype: Link Rect: 325, 436, 424, 442 Annotation: Subtype: Link Rect: 325, 428, 561, 434 Annotation: Subtype: Link Rect: 325, 420, 561, 426 Annotation: Subtype: Link Rect: 325, 412, 561, 418 Annotation: Subtype: Link Rect: 325, 404, 409, 410 Annotation: Subtype: Link Rect: 325, 396, 561, 402 Annotation: Subtype: Link Rect: 325, 388, 561, 394 Annotation: Subtype: Link Rect: 325, 380, 490, 386 Annotation: Subtype: Link Rect: 325, 372, 561, 378 Annotation: Subtype: Link Rect: 325, 364, 561, 370 Annotation: Subtype: Link Rect: 325, 356, 351, 362 Annotation: Subtype: Link Rect: 325, 348, 561, 354 Annotation: Subtype: Link Rect: 325, 340, 561, 346 Annotation: Subtype: Link Rect: 325, 332, 516, 338 Checksum: c00b6fad Type: CRC32 Checksum: 1307117bd6f195d86faef09ed900b50e Type: MD5 Checksum: 4305b53ef76db399302be9119363b37442de8acb Type: SHA-1