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edu.harvard.hul.ois.jhove.module.pdf.PdfInvalidException: Invalid indirect destination - referenced object 'B39' cannot be found Offset: 1172086 ID: PDF-HUL-122 ErrorMessage: edu.harvard.hul.ois.jhove.module.pdf.PdfInvalidException: Invalid indirect destination - referenced object 'B24' cannot be found Offset: 1172086 MIMEtype: application/pdf PDFMetadata: Objects: 567 FreeObjects: 1 IncrementalUpdates: 2 DocumentCatalog: PageLayout: SinglePage PageMode: UseOutlines Outlines: Item: Title: References Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@768debd Children: Item: Title: Introduction Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@490d6c15 Item: Title: Methods Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@7d4793a8 Children: Item: Title: DNA Extraction and Sequencing Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@449b2d27 Item: Title: Genome Assembly Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@5479e3f Item: Title: Reference-Guided Contig Ordering, Orientation, and Genome Quality Assessment Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@27082746 Item: Title: Genome Annotation Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@66133adc Item: Title: Annotation of Transposable Elements Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@7bfcd12c Item: Title: Specific Annotation of LTR-Retrotransposons Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@42f30e0a Item: Title: Insertion Age of LTR-Retrotransposons Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@24273305 Item: Title: Identification of Polymorphic LTR-Retrotransposons Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@5b1d2887 Item: Title: Results Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@46f5f779 Children: Item: Title: Genome Assembly Workflow Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@1c2c22f3 Item: Title: Pseudomolecule Construction Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@18e8568 Item: Title: Further Polishing of Pseudomolecules Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@33e5ccce Item: Title: Assembly v4.0 Captures a Larger Fraction of Repetitive Elements Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@5a42bbf4 Item: Title: Assembly v4.0 Contains Many Young LTR-Retrotransposons Missing In v3.6.1 Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@270421f5 Item: Title: Young LTR-Retrotransposons Are Highly Polymorphic and Have a Potential Impact on Genes Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@52d455b8 Item: Title: Discussion Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4f4a7090 Children: Item: Title: An Improved Melon Reference Genome Assembly Produced Using Long-Read Sequencing Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@18ef96 Item: Title: V4.0 Assembly Uncovers a Burst of Young LTR-Retrotransposons Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@6956de9 Item: Title: Impact of Young LTR-Retrotransposons on Genes Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@769c9116 Item: Title: Conclusion Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@6aceb1a5 Item: Title: Data Availability Statement Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@2d6d8735 Item: Title: Author Contributions Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@ba4d54 Item: Title: Funding Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@12bc6874 Item: Title: Supplementary Material Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@de0a01f Item: Title: References Destination: edu.harvard.hul.ois.jhove.module.pdf.PdfSimpleObject@4c75cab9 Info: Title: An Improved Melon Reference Genome With Single-Molecule Sequencing Uncovers a Recent Burst of Transposable Elements With Potential Impact on Genes Author: Raú Subject: The published melon (Cucumis melo L Keywords: long-reads, assembly, reference genome, transposable elements, melon Creator: Arbortext Advanced Print Publisher 10.0.1306/W Unicode Producer: Acrobat Distiller 7.0 (Windows) CreationDate: Fri Jan 31 01:41:21 CET 2020 ModDate: Fri Jan 31 03:38:46 CET 2020 ID: 0x912d273eacb1885255e7a817ca9aa649, 0x5f96cc9302177c46af93c6ae8fb3126a Filters: FilterPipeline: FlateDecode FilterPipeline: DCTDecode Images: Image: NisoImageMetadata: FormatName: image/jpg CompressionScheme: JPEG ImageWidth: 1417 ImageHeight: 762 ColorSpace: RGB BitsPerSample: 8 BitsPerSampleUnit: integer Image: NisoImageMetadata: FormatName: image/png ImageWidth: 1476 ImageHeight: 728 ColorSpace: RGB BitsPerSample: 8 BitsPerSampleUnit: integer Filter: FlateDecode Image: NisoImageMetadata: FormatName: image/jpg 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Encoding: WinAnsiEncoding Font: BaseFont: EOGADA+AdvOT1deab444.I+fb FontSubset: true FirstChar: 1 LastChar: 1 FontDescriptor: FontName: EOGADA+AdvOT1deab444.I+fb Flags: Symbolic FontBBox: 9, 0, 572, 708 FontFile3: true EncodingDictionary: Differences: true ToUnicode: true XMP: Acrobat Distiller 7.0 (Windows) long-reads, assembly, reference genome, transposable elements, melon 2020-01-31T10:38:46+08:00 2020-01-31T08:41:21+08:00 Arbortext Advanced Print Publisher 10.0.1306/W Unicode 2020-01-31T10:38:46+08:00 application/pdf The published melon (Cucumis melo L An Improved Melon Reference Genome With Single-Molecule Sequencing Uncovers a Recent Burst of Transposable Elements With Potential Impact on Genes Ra&uacute l Castanera Valentino Ruggieri Marta Pujol Jordi Garcia-Mas Josep M. Casacuberta long-reads assembly reference genome transposable elements melon uuid:54946ad7-9c53-46d8-a5c6-1a32097fdb45 uuid:f1cf0a2c-ede9-4184-a4e2-e142443fd6a2 Pages: Page: Label: 1 Annotations: Annotation: Subtype: Link Rect: 175, 585, 478, 606 Annotation: Subtype: Link Rect: 175, 562, 476, 583 Annotation: Subtype: Link Rect: 175, 539, 548, 560 Annotation: Subtype: Link Rect: 175, 516, 485, 537 Annotation: Subtype: Link Rect: 175, 493, 439, 514 Annotation: Subtype: Link Rect: 175, 470, 239, 479 Annotation: Subtype: Link Rect: 252, 470, 328, 479 Annotation: Subtype: Link Rect: 347, 470, 394, 479 Annotation: Subtype: Link Rect: 410, 470, 481, 479 Annotation: Subtype: Link Rect: 193, 459, 287, 468 Annotation: Subtype: Link Rect: 337, 87, 409, 97 Annotation: Subtype: Link Rect: 338, 76, 428, 85 Destination: null Annotation: Subtype: Link Rect: 45, 29, 121, 36 Annotation: Subtype: Link Rect: 129, 29, 187, 36 Annotation: Subtype: Link Rect: 423, 29, 549, 36 Annotation: Subtype: Link Rect: 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