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Title:          Unravelling the consequences of the bacteriophages in human samples
Subject:        Scientific Reports, doi:10.1038/s41598-020-63432-7
Keywords:       
Author:         Pedro Blanco-Picazo
Creator:        Springer
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Table 1. Human samples in which bacteriophages were detected. CSF: Cerebrospinal fluid. *Only detected with E. coli WG5, with B. fragilis, P. aeruginosa and E. faecalis were not observed.:56' cannot be found
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Table 3. Bacterial genes detected in the virome of the samples. P: Plasmid, C: Chromosome, PH: Phage genome *Number of different 16S rRNA genes or different ARGs that were detected in each virome as verified by Kraken.:68' cannot be found
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      Title: Unravelling the consequences of the bacteriophages in human samples
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        Title: Results
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         Item: 
          Title: Detection of phages in human samples. 
         Item: 
          Title: Virome analysis. 
         Item: 
          Title: Bacterial genes in the virome. 
         Item: 
          Title: Interference of phages with the molecular detection of bacteria. 
         Item: 
          Title: Bacterial strain recovery. 
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        Title: Discussion
       Item: 
        Title: Methods
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         Item: 
          Title: Samples. 
         Item: 
          Title: Detection of phages in the samples. 
         Item: 
          Title: Transmission electron microscopy (TEM) studies. 
         Item: 
          Title: Virome analysis. 
         Item: 
          Title: Removal of phages from the sample. 
         Item: 
          Title: qPCR procedures. 
         Item: 
          Title: Statistical analysis. 
       Item: 
        Title: Acknowledgements
       Item: 
        Title: Figure 1 Electron micrographs of phages from ascetic fluid, blood, serum, cerebrospinal fluid (CSF) and urine.
       Item: 
        Title: Figure 2 Identification of the 16S rRNA gene sequences found in the virome of a pool of ascitic fluids, and four pools of urine samples.
       Item: 
        Title: Figure 3 Phage reduction (log10 gene copy [GC]) of the Stx phage after filtration through 0.
       Item: 
        Title: Figure 4 Phages can bias the outcome of enrichment cultures.
       Item: 
        Title: Table 1 Human samples in which bacteriophages were detected.
       Item: 
        Title: Table 2 Viromes of the human samples and bacterial genes detected.
       Item: 
        Title: Table 3 Bacterial genes detected in the virome of the samples.
       Item: 
        Title: Table 4 Values of phage (PFU/mL) and bacteria (CFU/mL) in the samples after the application of the filtration method (F) in comparison with the non-filtered controls (NF).
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Comment 
PRISM recommends that the PRISM Aggregation Type Controlled Vocabulary be used to provide values for this element. 
Note: PRISM recommends against the use of the #other value currently allowed in this controlled vocabulary. In lieu of using #other please reach out to the PRISM group at info@prismstandard.org to request addition of your term to the Aggregation Type Controlled Vocabulary. 

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The DOI may also be used as the dc:identifier. If used as a dc:identifier, the URI form should be captured, and the bare identifier should also be captured using prism:doi. If an alternate unique identifier is used as the required dc:identifier, then the DOI should be specified as a bare identifier within prism:doi only. 
If the URL associated with a DOI is to be specified, then prism:url may be used in conjunction with prism:doi in order to provide the service endpoint (i.e. the URL). 
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Permits publishers to include a second ISSN, identifying an electronic version of the issue in which the resource occurs (therefore e(lectronic)Issn. If used, prism:eIssn MUST contain the ISSN of the electronic version. See prism:issn. 
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Typically this will be used to provide the name of the magazine an article appeared in as metadata for the article, along with information such as the article title, the publisher, volume, number, and cover date. 

Note: Publication name can be used to differentiate between a print magazine and the online version if the names are different such as “magazine” and “magazine.com.” 
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                           <pdfaProperty:category>external</pdfaProperty:category>
                           <pdfaProperty:description>This element provides the url for an article or unit of content. 
The attribute platform is optionally allowed for situations in which multiple URLs must be specified. PRISM recommends that a subset of the PCV platform values, namely “mobile” and “web”, be used in conjunction with this element. 
NOTE: PRISM recommends against the use of the #other value allowed in the PRISM Platform controlled vocabulary. In lieu of using #other please reach out to the PRISM group at prism-wg@yahoogroups.com to request addition of your term to the Platform Controlled Vocabulary. 
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AM = Accepted Manuscript
P = Proof
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CVoR = Corrected Version of Record
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