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breeding in apple Destination: title_link Children: Item: Title: Introduction Destination: A1 Item: Title: Results Destination: A2 Children: Item: Title: Composition of the apple REFPOP Destination: B1 Item: Title: Marker imputation and validation of the imputation output Destination: B2 Item: Title: Linkage disequilibrium and population structure Destination: B3 Item: Title: Phenotypic analyses Destination: B4 Item: Title: Genome-wide association and prediction analyses Destination: B5 Item: Title: Discussion Destination: A3 Children: Item: Title: Composition of the apple REFPOP Destination: B6 Item: Title: Expanding genomic information via imputation Destination: B7 Item: Title: Insights into apple population genomics Destination: B8 Item: Title: An efficient design for genomics-assisted breeding Destination: B9 Item: Title: Prospect of the apple REFPOP for multi-environment, multi-management and multi-trait testing Destination: B10 Item: Title: Conclusion Destination: A4 Item: Title: Materials and methods Destination: A5 Children: Item: Title: Composition of apple REFPOP plant material Destination: B11 Item: Title: Multiplication of plant material and planting design Destination: B12 Item: Title: Molecular marker genotyping Destination: B13 Item: Title: Marker imputation Destination: B14 Item: Title: Genomic data analyses Destination: B15 Children: Item: Title: Linkage disequilibrium Destination: C1 Item: Title: Population structure Destination: C2 Item: Title: Phenotype scoring Destination: B16 Item: Title: Phenotypic data analyses Destination: B17 Children: Item: Title: Correction of spatial heterogeneity Destination: C3 Item: Title: Broad-sense heritability and phenotypic variation Destination: C4 Item: Title: Phenotypic least-square means Destination: C5 Item: Title: Genome-wide association and prediction analysis Destination: B18 Children: Item: Title: Genome-wide association study Destination: C6 Item: Title: Genomic prediction Destination: C7 Item: Title: Comparison of GWAS and genomic prediction performance under various SNP densities Destination: C8 Item: Title: Analysis of prediction precision Destination: C9 Item: Title: Acknowledgements Destination: M1 Item: Title: Acknowledgements Destination: M1 Info: Title: The apple REFPOP a reference population for genomics-assisted breeding in apple Author: Michaela Jung Subject: Horticulture Research, doi:10.1038/s41438-020-00408-8 Keywords: Creator: Springer Producer: iText® 5.3.5 ©2000-2012 1T3XT BVBA (SPRINGER SBM; licensed version) CreationDate: Thu Oct 29 04:48:40 CET 2020 ModDate: Fri Oct 30 05:23:25 CET 2020 ID: 0x6b17e1561105f2e04fa7a2a1235c09de, 0xa8737cee350c7ec4ef0b4e6fd91dde01 Filters: FilterPipeline: FlateDecode FilterPipeline: DCTDecode Images: Image: NisoImageMetadata: FormatName: image/jpg CompressionScheme: JPEG ImageWidth: 1500 ImageHeight: 492 ColorSpace: RGB BitsPerSample: 8 BitsPerSampleUnit: integer Intent: Perceptual Image: NisoImageMetadata: FormatName: 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Cantin Walter Guerra Nicholas P. Howard Beat Keller Mariusz Lewandowski Matthew Ordidge Marijn Rymenants Nadia Sanin Bruno Studer Edward Zurawicz François Laurens Andrea Patocchi Hélène Muranty Springer US Horticulture Research, doi:10.1038/s41438-020-00408-8 10.1038/s41438-020-00408-8 http://dx.doi.org/10.1038/s41438-020-00408-8 journal Horticulture Research © 2020, The Author(s) 2052-7276 10.1038/s41438-020-00408-8 springer.com springerlink.com 2010-04-23 True 10.1038/s41438-020-00408-8 springer.com springerlink.com Springer 2020-10-30T05:23:25+01:00 2020-10-29T08:48:40+05:30 2020-10-30T05:23:25+01:00 True iText® 5.3.5 ©2000-2012 1T3XT BVBA (SPRINGER SBM; licensed version) VoR uuid:f0d2c4aa-3ef7-4a21-ab26-1c6edbddbb84 uuid:1a271a2d-da8a-43bb-8410-3e8365c4440e default 1 converted uuid:43167430-416f-417f-928e-8a0eaefbf325 converted to PDF/A-2b pdfToolbox 2020-10-29T08:49:23+05:30 2 B Maria José Aranzana http://orcid.org/0000-0002-0240-8021 Nicholas P. 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