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Title:          Breeding farm, level of feeding and presence of antibiotics in the feed influence rabbit cecal microbiota
Subject:        anim microbiome, doi:10.1186/s42523-020-00059-z
Keywords:       Cecal microbiota,Meat rabbit,Breeding farm,Feed restriction,Antibiotics,16S MiSeq Illumina sequencing,Analysis of variance,Multivariate approach
Author:         María Velasco-Galilea
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      Title: Abstract
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       Item: 
        Title: Background
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       Item: 
        Title: Results
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       Item: 
        Title: Conclusions
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      Title: Background
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      Title: Results
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       Item: 
        Title: Sequence processing
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        Title: Animal management and farm environment shaping cecal microbial alpha diversity
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        Title: Animal management and farm environment shaping cecal microbial composition
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          Title: Differential growth and cecal microbial composition across farms
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         Item: 
          Title: Differential growth and cecal microbial composition across feeding regimes
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          Title: Effect of the presence of antibiotics in the feed
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        Title: Microbial information as a classifier of cecal samples according to farm environment and animal management
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      Title: Discussion
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        Title: 16S rRNA gene-based characterization of meat rabbit cecal microbiota
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        Title: Farm environment modify alpha diversity
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       Item: 
        Title: Farm environment has a large impact on rabbit cecal microbiota
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       Item: 
        Title: Administration of antibiotics impact on some taxa relative abundances
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       Item: 
        Title: Feed restriction modify Euryarchaeota and some bacteria relative abundances
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       Item: 
        Title: Rabbit cecal microbiota is shaped by farm environment and animal management
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     Item: 
      Title: Conclusions
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     Item: 
      Title: Methods
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      Children: 
       Item: 
        Title: Animals and experimental design
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       Item: 
        Title: Sample processing, DNA extraction and sequencing
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       Item: 
        Title: Bioinformatic pipeline for OTU calling
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       Item: 
        Title: Models and statistical methods
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     Item: 
      Title: Supplementary Information
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     Item: 
      Title: Abbreviations
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     Item: 
      Title: Acknowledgements
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     Item: 
      Title: Authors’ contributions
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      Title: Availability of data and materials
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      Title: Ethics approval and consent to participate
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      Title: Consent for publication
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      Title: Competing interests
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      Title: Author details
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      Title: References
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     Item: 
      Title: Publisher’s Note
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    Title: Breeding farm, level of feeding and presence of antibiotics in the feed influence rabbit cecal microbiota
    Author: María Velasco-Galilea
    Subject: anim microbiome, doi:10.1186/s42523-020-00059-z
    Keywords: Cecal microbiota,Meat rabbit,Breeding farm,Feed restriction,Antibiotics,16S MiSeq Illumina sequencing,Analysis of variance,Multivariate approach
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