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González Creator: Adobe InDesign 15.0 (Windows) Producer: Adobe PDF Library 15.0; modified using iText® 5.3.5 ©2000-2012 1T3XT BVBA (SPRINGER SBM; licensed version) CreationDate: Tue Nov 17 16:08:39 2020 CET ModDate: Mon Nov 23 10:21:36 2020 CET Custom Metadata: yes Metadata Stream: yes Tagged: no UserProperties: no Suspects: no Form: none JavaScript: no Pages: 17 Encrypted: no Page size: 595.276 x 790.866 pts Page rot: 0 File size: 1709650 bytes Optimized: no PDF version: 1.4 name type encoding emb sub uni object ID ------------------------------------ ----------------- ---------------- --- --- --- --------- MyriadPro-Regular Type 1C Custom yes no yes 34 0 MyriadPro-Bold Type 1C Custom yes no yes 53 0 MyriadPro-Light Type 1C Custom yes no yes 154 0 MyriadPro-Semibold Type 1C Custom yes no yes 54 0 WarnockPro-Regular Type 1C Custom yes no yes 35 0 MyriadPro-It Type 1C Custom yes no yes 36 0 GOVIXR+MyriadPro-LightIt Type 1C WinAnsi yes yes yes 153 0 WarnockPro-It Type 1C WinAnsi yes no yes 37 0 MyriadPro-Regular2 Type 1C WinAnsi yes no yes 285 0 OUOKTB+WarnockPro-Regular2 Type 1C Custom yes yes no 78 0 OUOKTB+WarnockPro-It2 Type 1C Custom yes yes no 79 0 OUOKTB+MTSYN Type 1C Custom yes yes no 80 0 OUOKTB+MTMI Type 1C Custom yes yes no 81 0 CLMDCR+MyriadPro-SemiboldIt Type 1C WinAnsi yes yes yes 113 0 HPSUPS+MTSY Type 1C Custom yes yes yes 133 0 WarnockPro-Light Type 1C WinAnsi yes no yes 232 0 YGMFYH+STIXMath-Regular Type 1C WinAnsi yes yes yes 272 0 Jhove (Rel. 1.28.0, 2023-05-18) Date: 2024-10-02 04:00:43 CEST RepresentationInformation: pmc_33225898.pdf ReportingModule: PDF-hul, Rel. 1.12.4 (2023-03-16) LastModified: 2023-03-31 11:47:37 CEST Size: 1709650 Format: PDF Version: 1.4 Status: Well-Formed and valid SignatureMatches: PDF-hul MIMEtype: application/pdf PDFMetadata: Objects: 434 FreeObjects: 1 IncrementalUpdates: 0 DocumentCatalog: ViewerPreferences: HideToolbar: false HideMenubar: false HideWindowUI: false FitWindow: false CenterWindow: false DisplayDocTitle: false NonFullScreenPageMode: UseNone Direction: L2R ViewArea: CropBox ViewClip: CropBox PrintArea: CropBox PageClip: CropBox PageLayout: SinglePage PageMode: UseOutlines Language: en-US Outlines: Item: Title: MADloy: robust detection of mosaic loss of chromosome Y from genotype-array-intensity data Children: Item: Title: Abstract Children: Item: Title: Background: Item: Title: Results: Item: Title: Conclusions: Item: Title: Background Item: Title: Implementation Children: Item: Title: mLOY calling Item: Title: LRR, mLRR-Y, BAF and B-deviation Item: Title: Quality control Item: Title: MADloy software Item: Title: Experimental validation Item: Title: Statistical analyses Item: Title: Simulation studies Item: Title: EGCUT data Item: Title: TCGA data Item: Title: Results Children: Item: Title: Improved detection of mLOY status Item: Title: mLOY improves the statistical power of association studies Item: Title: Application of MADloy on finding transcriptomic signatures of mLOY Item: Title: Discussion Item: Title: Conclusions Item: Title: Availability and requirements Item: Title: Acknowledgments Item: Title: References Info: Title: MADloy: robust detection of mosaic loss of chromosome Y from genotype-array-intensity data Author: Juan R. 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