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soldiers Destination: slink3 Item: Title: Phylogenetic analysis of the Salmonella enterica Paratyphi C-retrieved sequences Destination: slink4 Item: Title: Temporal relationship of La Sagrera with other taxa in the Paratyphi C clade Destination: slink5 Item: Title: Discussion Destination: flink3 Children: Item: Title: Limitations of the study Destination: slink6 Item: Title: Supplemental information Destination: falink4 Item: Title: Acknowledgments Destination: acklink1 Item: Title: Author contributions Destination: flink5 Item: Title: Declaration of interests Destination: flink6 Item: Title: References Destination: blink1 Item: Title: STAR★ Methods Destination: flink7 Children: Item: Title: Key resources table Destination: slink7 Item: Title: Resource availability Destination: slink8 Children: Item: Title: Lead contact Destination: tlink1 Item: Title: Materials availability Destination: tlink2 Item: Title: Data and code availability Destination: tlink3 Item: Title: Experimental model and subjects details Destination: slink9 Children: Item: Title: The site Destination: tlink4 Item: Title: Method details Destination: slink10 Children: Item: Title: DNA extraction and library preparation Destination: tlink5 Item: Title: Human DNA mapping Destination: tlink6 Item: Title: Sex determination and uniparental markers analysis Destination: tlink7 Item: Title: Contamination estimates Destination: tlink8 Item: Title: Human population genetics analysis Destination: tlink9 Item: Title: Pathogens' screening and Salmonella sequences mapping Destination: tlink10 Item: Title: Coverage and mappability of Salmonella enterica Paratyphi C Destination: tlink11 Item: Title: Virulence gene presence Destination: tlink12 Item: Title: Variant calling and phylogenetics dataset creation Destination: tlink13 Item: Title: Maximum likelihood tree Destination: tlink14 Item: Title: Temporal signal exploration Destination: tlink15 Item: Title: Quantification and statistical analysis Destination: 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-228, 1003, 962 FontFile3: true Encoding: WinAnsiEncoding Font: BaseFont: DHNHHN+AdvPSA5CF FontSubset: true FirstChar: 65 LastChar: 83 FontDescriptor: FontName: DHNHHN+AdvPSA5CF Flags: Nonsymbolic FontBBox: -156, -239, 1000, 781 FontFile3: true Encoding: WinAnsiEncoding Font: BaseFont: DHHBHF+AdvPS480274 FontSubset: true FirstChar: 43 LastChar: 66 FontDescriptor: FontName: DHHBHF+AdvPS480274 Flags: Nonsymbolic FontBBox: 0, -208, 1354, 791 FontFile3: true Encoding: WinAnsiEncoding Font: BaseFont: DHHBHG+AdvPSMPi6 FontSubset: true FirstChar: 100 LastChar: 100 FontDescriptor: FontName: DHHBHG+AdvPSMPi6 Flags: Nonsymbolic FontBBox: 0, -177, 989, 739 FontFile3: true Encoding: WinAnsiEncoding XMP: application/pdf doi:10.1016/j.isci.2021.103021 Salmonella enterica from a soldier from the 1652 siege of Barcelona (Spain) supports historical transatlantic epidemic contacts Toni de-Dios Pablo Carrión Iñigo Olalde Laia Llovera Nadal Esther Lizano Dídac Pàmies Tomas Marques-Bonet François Balloux Lucy van Dorp Carles Lalueza-Fox Biological sciences Genomic analysis Genomics Paleogenetics ISCIENCE, 24 (2021) 103021. doi:10.1016/j.isci.2021.103021 Elsevier Inc. journal ISCIENCE © 2021 The Author(s). 2589-0042 24 9 24 September 2021 2021-09-24 103021 103021 10.1016/j.isci.2021.103021 https://doi.org/10.1016/j.isci.2021.103021 2010-04-23 true 10.1016/j.isci.2021.103021 elsevier.com sciencedirect.com VoR 7.0 10.1016/j.isci.2021.103021 noindex 12 true 2010-04-23 true 21th September 2021 sciencedirect.com elsevier.com Elsevier 2021-09-22T10:12:51+05:30 2021-09-22T10:12:51+05:30 True 21th September 2021 Acrobat Distiller 8.1.0 (Windows) uuid:f6af9203-bee9-413b-bf6d-f4bc5af1a94c uuid:27b8ae3e-07f9-4a93-b585-ef1fa4355ddf http://creativecommons.org/licenses/by/4.0/ Pages: Page: Sequence: 1 Annotations: Annotation: Subtype: Link Rect: 455, 436, 517, 442 Annotation: Subtype: Link Rect: 455, 427, 535, 433 Annotation: Subtype: Link Rect: 455, 68, 520, 74 Annotation: Subtype: Link Rect: 455, 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