8d25a4c671c9b12002f149dc50b369a6 pmc_33552127.pdf 139f85beeeb344c82317a45aaf72dc038afc8d54 pmc_33552127.pdf 342622da0c993c88c10e1055a56d4a78594a101adab016574e2465fa3bd7cc13 pmc_33552127.pdf Title: Genetic Diversity of Bubalus bubalis in Germany and Global Relations of Its Genetic Background Subject: This is the first study to explore the genetic diversity and population structure of domestic water buffalo (Bubalus bubalis) in Germany and their potential relations to herds in other parts of Europe or worldwide. Keywords: Bubalus bubalis, European populations, genotyping, genetic diversity, population structure, run of homozygosity Author: Andreas Hoeflich Creator: LaTeX with hyperref package Producer: pdfTeX-1.40.15 CreationDate: Fri Jan 22 06:59:34 2021 CET ModDate: Fri Jan 22 09:49:11 2021 CET Custom Metadata: yes Metadata Stream: yes Tagged: no UserProperties: no Suspects: no Form: none JavaScript: no Pages: 16 Encrypted: no Page size: 595.276 x 779.528 pts Page rot: 0 File size: 3958040 bytes Optimized: no PDF version: 1.5 name type encoding emb sub uni object ID ------------------------------------ ----------------- ---------------- --- --- --- --------- PTEENH+MinionPro-Regular Type 1 Custom yes yes no 28 0 UQWUDT+HelveticaNeueLTStd-Bd Type 1 Custom yes yes no 29 0 WFTDNK+HelveticaNeueLTStd-Lt Type 1 Custom yes yes no 30 0 FAIJXB+HelveticaNeueLTStd-BdIt Type 1 Custom yes yes no 35 0 VXDMBG+HelveticaNeueLTStd-LtIt Type 1 Custom yes yes no 36 0 ZVGMGC+HelveticaNeueLTStd-MdIt Type 1 Custom yes yes no 37 0 XRPKNR+MinionPro-It Type 1 Custom yes yes no 41 0 BMNZZL+MTSYN Type 1 Builtin yes yes no 160 0 ZLQYCB+MinionPro-Bold Type 1 Custom yes yes no 232 0 JYDOCF+MTGU Type 1 Builtin yes yes no 233 0 PFBWEX+MinionPro-BoldIt Type 1 Custom yes yes no 240 0 ACTPHJ+RBLMI Type 1 Builtin yes yes no 241 0 WAHJAP+BLEX Type 1 Custom yes yes no 377 0 Jhove (Rel. 1.28.0, 2023-05-18) Date: 2024-10-02 03:32:18 CEST RepresentationInformation: pmc_33552127.pdf ReportingModule: PDF-hul, Rel. 1.12.4 (2023-03-16) LastModified: 2023-03-31 12:08:47 CEST Size: 3958040 Format: PDF Version: 1.5 Status: Well-Formed and valid SignatureMatches: PDF-hul MIMEtype: application/pdf PDFMetadata: Objects: 911 FreeObjects: 70 IncrementalUpdates: 1 DocumentCatalog: PageLayout: SinglePage PageMode: UseOutlines Outlines: Item: Title: Genetic Diversity of Bubalus bubalis in Germany and Global Relations of Its Genetic Background Children: Item: Title: Introduction Item: Title: Materials and Methods Children: Item: Title: Ethics Statement Item: Title: Samples Collection, DNA Purification, and Genotyping Item: Title: Datasets Updating and Merging Item: Title: Genetic Relationship and Population Structure Item: Title: Run of Homozygosity Item: Title: Results Children: Item: Title: Analysis of Genetic Diversity and Population Structure Item: Title: Run of Homozygosity Item: Title: Localizing ROH Hotspots and Gene Set Enrichment Analyses Item: Title: Discussion Children: Item: Title: European Buffalos Stand Out From Others Item: Title: Different Genotypes in European Buffalos and a Novel One in Hungary Item: Title: Overlapping ROH Signals in German Buffalo Genome Item: Title: Conclusion Item: Title: Data Availability Statement Item: Title: Ethics Statement Item: Title: Author Contributions Item: Title: Acknowledgments Item: Title: Supplementary Material Item: Title: References Info: Title: Genetic Diversity of Bubalus bubalis in Germany and Global Relations of Its Genetic Background Author: Andreas Hoeflich Subject: This is the first study to explore the genetic diversity and population structure of domestic water buffalo (Bubalus bubalis) in Germany and their potential relations to herds in other parts of Europe or worldwide. Keywords: Bubalus bubalis, European populations, genotyping, genetic diversity, population structure, run of homozygosity Creator: LaTeX with hyperref package Producer: pdfTeX-1.40.15 CreationDate: Fri Jan 22 07:29:34 CET 2021 ModDate: Fri Jan 22 10:19:11 CET 2021 ID: 0x63686c304212a042d26d35397320d26e, 0xddb71a1120834541a8df716e15084b45 Filters: FilterPipeline: FlateDecode Fonts: Type1: Font: BaseFont: BMNZZL+MTSYN FontSubset: true FirstChar: 13 LastChar: 68 FontDescriptor: FontName: BMNZZL+MTSYN Flags: Symbolic FontBBox: 0, -954, 1043, 900 FontFile: true Font: BaseFont: FAIJXB+HelveticaNeueLTStd-BdIt FontSubset: true FirstChar: 42 LastChar: 121 FontDescriptor: FontName: FAIJXB+HelveticaNeueLTStd-BdIt Flags: Symbolic FontBBox: -166, -218, 1129, 975 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: VXDMBG+HelveticaNeueLTStd-LtIt FontSubset: true FirstChar: 2 LastChar: 252 FontDescriptor: FontName: VXDMBG+HelveticaNeueLTStd-LtIt Flags: Symbolic FontBBox: -165, -214, 1099, 951 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: ZVGMGC+HelveticaNeueLTStd-MdIt FontSubset: true FirstChar: 3 LastChar: 252 FontDescriptor: FontName: ZVGMGC+HelveticaNeueLTStd-MdIt Flags: Symbolic FontBBox: -165, -218, 1125, 947 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: ZLQYCB+MinionPro-Bold FontSubset: true FirstChar: 3 LastChar: 150 FontDescriptor: FontName: ZLQYCB+MinionPro-Bold Flags: Symbolic FontBBox: -318, -360, 1684, 917 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: XRPKNR+MinionPro-It FontSubset: true FirstChar: 3 LastChar: 252 FontDescriptor: FontName: XRPKNR+MinionPro-It Flags: Symbolic FontBBox: -201, -360, 1684, 919 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: JYDOCF+MTGU FontSubset: true FirstChar: 109 LastChar: 109 FontDescriptor: FontName: JYDOCF+MTGU Flags: Symbolic FontBBox: 25, -213, 839, 683 FontFile: true Font: BaseFont: PFBWEX+MinionPro-BoldIt FontSubset: true FirstChar: 150 LastChar: 150 FontDescriptor: FontName: PFBWEX+MinionPro-BoldIt Flags: Symbolic FontBBox: -230, -360, 1684, 919 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: ACTPHJ+RBLMI FontSubset: true FirstChar: 54 LastChar: 62 FontDescriptor: FontName: ACTPHJ+RBLMI Flags: Symbolic FontBBox: -11, -230, 987, 750 FontFile: true Font: BaseFont: WAHJAP+BLEX FontSubset: true FirstChar: 80 LastChar: 80 FontDescriptor: FontName: WAHJAP+BLEX Flags: Symbolic FontBBox: -23, -2954, 1454, 762 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: PTEENH+MinionPro-Regular FontSubset: true FirstChar: 2 LastChar: 252 FontDescriptor: FontName: PTEENH+MinionPro-Regular Flags: Symbolic FontBBox: -289, -360, 1684, 917 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: UQWUDT+HelveticaNeueLTStd-Bd FontSubset: true FirstChar: 2 LastChar: 124 FontDescriptor: FontName: UQWUDT+HelveticaNeueLTStd-Bd Flags: Symbolic FontBBox: -166, -218, 1078, 975 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: WFTDNK+HelveticaNeueLTStd-Lt FontSubset: true FirstChar: 2 LastChar: 252 FontDescriptor: FontName: WFTDNK+HelveticaNeueLTStd-Lt Flags: Symbolic FontBBox: -166, -214, 1050, 967 FontFile: true EncodingDictionary: Differences: true XMP: Bubalus bubalis, European populations, genotyping, genetic diversity, population structure, run of homozygosity pdfTeX-1.40.15 1.5 application/pdf fgene-11-610353.tex Genetic Diversity of Bubalus bubalis in Germany and Global Relations of Its Genetic Background This is the first study to explore the genetic diversity and population structure of domestic water buffalo (Bubalus bubalis) in Germany and their potential relations to herds in other parts of Europe or worldwide. Andreas Hoeflich 2021-01-22T11:29:34+05:30 Bubalus bubalis European populations genotyping genetic diversity population structure run of homozygosity 2021-01-22T11:29:34+05:30 2021-01-22T14:19:11+05:30 2021-01-22T14:19:11+05:30 LaTeX with hyperref package uuid:5f759b13-3e41-4d13-aa3e-f20aefdc9bbb uuid:d5b236aa-0a03-4223-a9d4-9494d6a79fa2 Pages: Page: Sequence: 1 Annotations: Annotation: Subtype: Link Rect: 43, 718, 133, 754 Annotation: Subtype: Link Rect: 474, 736, 551, 745 Annotation: Subtype: Link Rect: 465, 727, 551, 737 Annotation: Subtype: Link Rect: 449, 718, 551, 729 Annotation: Subtype: Link Rect: 86, 442, 160, 452 Annotation: Subtype: Link Rect: 71, 65, 160, 74 Annotation: Subtype: Link Rect: 521, 677, 551, 707 Annotation: Subtype: Link Rect: 176, 579, 551, 647 Annotation: Subtype: Link Rect: 233, 76, 270, 87 ActionDest: 718 Annotation: Subtype: Link Rect: 273, 76, 293, 87 ActionDest: 718 Annotation: Subtype: Link Rect: 460, 64, 522, 76 ActionDest: 718 Annotation: Subtype: 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