1fbad75890f12c6840afcebfe6519a1e pmc_35126422.pdf def7bb7486b82f823925e1db3f00e3e2e90f2dc1 pmc_35126422.pdf f654f8295729b3428f8eedd6f68749fe908e96c2d416ea16f12562252ba75f80 pmc_35126422.pdf Title: Integrative Approach for Precise Genotyping and Transcriptomics of Salt Tolerant Introgression Rice Lines Subject: Rice is the most salt sensitive cereal crop and its cultivation is particularly threatened by salt stress, which is currently worsened due to climate change. Keywords: genotyping by sequencing (GBS), Oryza sativa (L.), Saltol, transcriptomics, indica and japonica, introgression lines (ILs), salinity stress Author: Blanca San Segundo Creator: LaTeX with hyperref package Producer: pdfTeX-1.40.15 CreationDate: Mon Jan 17 14:08:42 2022 CET ModDate: Mon Jan 17 15:37:00 2022 CET Tagged: no UserProperties: no Suspects: no Form: AcroForm JavaScript: no Pages: 20 Encrypted: no Page size: 595.276 x 779.528 pts Page rot: 0 File size: 12471198 bytes Optimized: no PDF version: 1.6 name type encoding emb sub uni object ID ------------------------------------ ----------------- ---------------- --- --- --- --------- YHKJOY+MinionPro-Regular Type 1 Custom yes yes no 24 0 RAQTAB+HelveticaNeueLTStd-Bd Type 1 Custom yes yes no 25 0 HFDYHJ+HelveticaNeueLTStd-Lt Type 1 Custom yes yes no 26 0 BKBGLH+HelveticaNeueLTStd-BdIt Type 1 Custom yes yes no 31 0 AUTVZN+HelveticaNeueLTStd-LtIt Type 1 Custom yes yes no 32 0 OPAFON+HelveticaNeueLTStd-MdIt Type 1 Custom yes 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Genotyping-by-Sequencing Item: Title: Phenotyping for Salinity Tolerance Item: Title: RNA-Seq Library Preparation, Sequencing, and Data Analysis Item: Title: Transcriptome-Based Genotyping Item: Title: Reverse Transcription-Quantitative PCR Item: Title: Statistical Analysis Item: Title: Results Children: Item: Title: Development of Introgression Lines by Marker-Assisted Backcross Breeding Item: Title: Genotyping-by-Sequencing Genotyping of Introgression Lines Item: Title: Phenotypic Characterization of Introgression Lines Item: Title: Fine Mapping of Indica Introgressions in IL22 by Transcriptome Genotyping Item: Title: Comparative Transcript Profiling of the Salt Tolerant Line IL22 and Its Salt-Sensitive Parent Item: Title: Discussion Children: Item: Title: Fine Mapping of the Genomic Introgressions in the Salt-Tolerant Line IL22 Item: Title: Effect of Indica Introgressions on the Salt-Responsive Transcriptome of IL22 Plants Item: Title: Conclusion Item: Title: Data Availability Statement Item: Title: Author Contributions Item: Title: Funding Item: Title: Acknowledgments Item: Title: Supplementary Material Item: Title: References Filters: FilterPipeline: FlateDecode Fonts: Type1: Font: BaseFont: AUTVZN+HelveticaNeueLTStd-LtIt FontSubset: true FirstChar: 2 LastChar: 243 FontDescriptor: FontName: AUTVZN+HelveticaNeueLTStd-LtIt Flags: Symbolic FontBBox: -165, -214, 1099, 951 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: OPAFON+HelveticaNeueLTStd-MdIt FontSubset: true FirstChar: 42 LastChar: 243 FontDescriptor: FontName: OPAFON+HelveticaNeueLTStd-MdIt Flags: Symbolic FontBBox: -165, -218, 1125, 947 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: LDUHSL+MinionPro-It FontSubset: true FirstChar: 2 LastChar: 243 FontDescriptor: FontName: LDUHSL+MinionPro-It Flags: Symbolic FontBBox: -201, -360, 1684, 919 FontFile: true EncodingDictionary: Differences: true Font: BaseFont: PBVTLP+MTSYN FontSubset: true FirstChar: 0 LastChar: 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cereal crop and its cultivation is particularly threatened by salt stress, which is currently worsened due to climate change. Blanca San Segundo 2022-01-17T18:38:42+05:30 genotyping by sequencing (GBS) Oryza sativa (L.) 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