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Title:          ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation
Subject:        Journal of Structural Biology, 214 (2022) 107872. doi:10.1016/j.jsb.2022.107872
Author:         J. Jiménez de la Morena
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      Title: ScipionTomo: Towards cryo-electron tomography software integration, reproducibility, and validation
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       Item: 
        Title: 1 Introduction
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        Title: 2 The cryoET pipeline
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          Title: 2.1 Data and metadata import
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          Title: 2.2 Tilt series movies alignment
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          Title: 2.3 CTF estimation and correction
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          Title: 2.4 Tilt series alignment
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          Title: 2.5 Tomogram reconstruction
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          Title: 2.6 Tomogram denoising
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          Title: 2.7 Tomogram particle picking
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          Title: 2.8 Picking pruning tools
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          Title: 2.9 Subtomogram averaging (STA) and per-particle per-tilt refinement
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          Title: 2.10 Heterogeneity
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            Title: 2.10.1 Continuous conformational variability analysis
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           Item: 
            Title: 2.11.1 Local resolution estimation
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           Item: 
            Title: 2.11.2 Subtomogram subtraction
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           Item: 
            Title: 2.11.3 Map back
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          Title: 2.12 Visualization tools
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        Title: 3 Workflow examples
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         Item: 
          Title: 3.1 Workflow 1: From tilt series to particle picking
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          Title: 3.2 Workflow 2: Directional picking
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          Title: 3.3 Workflow 3: Subtomogram averaging
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          Title: 3.4 Workflow 4: The “SPA leap”
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        Title: 4 A collaborative software project
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        Title: 5 Current status and future work
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        Title: 6 Conclusions
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         Item: 
          Title: CRediT authorship contribution statement
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        Title: Declaration of Competing Interest
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        Title: Acknowledgments
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        Title: Appendix A Supplementary data
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        Title: References
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   Type: CRC32
  Checksum: 1b3d7f3988588ac77517cd1f6e06cbbf
   Type: MD5
  Checksum: ad8843a920dfa13e41d0bb3a14dd877b9b7ad06d
   Type: SHA-1