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IncrementalUpdates: 1 DocumentCatalog: PageLayout: SinglePage PageMode: UseNone Outlines: Item: Title: Copy-number intratumor heterogeneity increases the risk of relapse in chemotherapy-naive stage II colon cancer Destination: atl_PATH_5870_ Children: Item: Title: Introduction Destination: HeadingPATH_5870path5870-sec-0001 Item: Title: Materials and methods Destination: HeadingPATH_5870path5870-sec-0002 Children: Item: Title: Cohorts of patients and tumor samples Destination: HeadingPATH_5870path5870-sec-0003 Item: Title: SNP arrays and copy-number analysis Destination: HeadingPATH_5870path5870-sec-0004 Item: Title: Targeted next-generation sequencing Destination: HeadingPATH_5870path5870-sec-0005 Item: Title: Predictive modeling by machine learning analysis Destination: HeadingPATH_5870path5870-sec-0006 Item: Title: Results Destination: HeadingPATH_5870path5870-sec-0007 Children: Item: Title: Clinicopathological characteristics and their prognostic value in the study population Destination: HeadingPATH_5870path5870-sec-0008 Item: Title: Specific chromosomal aberrations and high CNA load in recurrent tumors Destination: HeadingPATH_5870path5870-sec-0009 Item: Title: Recurrent tumors exhibit an increased number of subclonal copy-number alterations Destination: HeadingPATH_5870path5870-sec-0010 Item: Title: Subclonal SNV and indel counts are not associated with disease relapse Destination: HeadingPATH_5870path5870-sec-0011 Item: Title: Tumor aneuploidy and intratumor heterogeneity are associated with risk of disease relapse Destination: HeadingPATH_5870path5870-sec-0012 Item: Title: Genomic markers improve the prediction of disease recurrence compared with clinicopathological parameters alone Destination: HeadingPATH_5870path5870-sec-0013 Item: Title: Discussion Destination: HeadingPATH_5870path5870-sec-0014 Item: Title: Acknowledgements Destination: HeadingPATH_5870path5870-sec-0015 Item: Title: Author contributions statement Destination: 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