b1eed945d904d9c7524d374913176d64 fmicb_15_1407904.pdf c740ec59d4edce9b05c3cedd1ab3537b2c7bcb40 fmicb_15_1407904.pdf d067913639429fb2fc9fa972d0fc4f67f468409ed8fc91246014844a91cdeda9 fmicb_15_1407904.pdf Title: Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean Subject: Prokaryotes dominate global oceans and shape biogeochemical cycles, yet most taxa remain uncultured and uncharacterized as of today. Keywords: taxonomy, genomics, phylogenomics, isolates, marine bacteria, biogeochemistry, biogeography Author: Xavier Rey-Velasco Creator: Adobe InDesign 14.0 (Windows) Producer: Adobe PDF Library 15.0 CreationDate: Wed May 22 12:41:16 2024 CEST ModDate: Thu May 23 19:48:55 2024 CEST Custom Metadata: no Metadata Stream: yes Tagged: yes UserProperties: no Suspects: no Form: none JavaScript: no Pages: 30 Encrypted: no Page size: 595.276 x 841.89 pts (A4) Page rot: 0 File size: 9754564 bytes Optimized: no PDF version: 1.6 name type encoding emb sub uni object ID ------------------------------------ ----------------- ---------------- --- --- --- --------- ESUQDQ+MuseoSans-500 Type 1C Custom yes yes yes 9 0 BQGYNW+MuseoSans-300 Type 1C Custom yes yes yes 110 0 ZNHMLA+MuseoSans-300Italic Type 1C WinAnsi yes yes yes 300 0 XKIAJE+MuseoSans-700 Type 1C Custom yes yes yes 285 0 NQISZY+GentiumPlus CID TrueType Identity-H yes yes yes 8 0 WGTUVG+MinionPro-Regular Type 1C Custom yes yes yes 10 0 SAVWRO+MinionPro-It Type 1C Custom yes yes yes 11 0 PTHEBU+STIX-Regular Type 1C WinAnsi yes yes yes 12 0 LNJGXC+STIXGeneral-Regular Type 1C Custom yes yes yes 13 0 JKFUVG+MuseoSans-500Italic Type 1C WinAnsi yes yes yes 436 0 Jhove (Rel. 1.28.0, 2023-05-18) Date: 2025-06-17 02:08:59 CEST RepresentationInformation: fmicb_15_1407904.pdf ReportingModule: PDF-hul, Rel. 1.12.4 (2023-03-16) LastModified: 2025-06-16 10:14:00 CEST Size: 9754564 Format: PDF Version: 1.6 Status: Well-Formed and valid SignatureMatches: PDF-hul MIMEtype: application/pdf Profile: Tagged PDF PDFMetadata: Objects: 5955 FreeObjects: 2 IncrementalUpdates: 1 DocumentCatalog: ViewerPreferences: HideToolbar: false HideMenubar: false HideWindowUI: false FitWindow: false CenterWindow: false DisplayDocTitle: false NonFullScreenPageMode: UseNone Direction: L2R ViewArea: CropBox ViewClip: CropBox PrintArea: CropBox PageClip: CropBox PageLayout: SinglePage PageMode: UseNone Language: en-GB Outlines: Item: Title: Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean Children: Item: Title: 1 Introduction Item: Title: 2 Materials and methods Children: Item: Title: 2.1 Isolation of the strains Item: Title: 2.2 Identification and selection of the strains Item: Title: 2.3 Whole-genome sequencing, assembly, and characterization Item: Title: 2.4 16S rRNA gene sequence analysis Item: Title: 2.5 Phenotypic characterization Item: Title: 2.6 Inference of phylogeny Item: Title: 2.7 Screening of biogeochemically relevant genes and geographic distribution Item: Title: 3 Results Children: Item: Title: 3.1 Overview of the strains and genome features Item: Title: 3.2 Phylogeny Item: Title: 3.3 Physiology and chemotaxonomy Item: Title: 3.4 Biogeochemical relevance Item: Title: 3.5 Biogeography Item: Title: 4 Discussion Children: Item: Title: 4.1 Differential characteristics of the Alphaproteobacteria strains Item: Title: 4.2 Differential characteristics of the Gammaproteobacteria strains Item: Title: 4.3 Differential characteristics of the Flavobacteriaceae strains Item: Title: 4.4 Differential characteristics of the Rhodothermia strains Item: Title: 4.5 Ecological relevance of the new strains Item: Title: 4.6 Concluding remarks Item: Title: 4.7 Description of Tropicimonas omnivorans sp. nov. Item: Title: 4.8 Description of Stakelama saccharophila sp. nov. Item: Title: 4.9 Description of Croceicoccus esteveae sp. nov. Item: Title: 4.10 Description of Banduia gen. nov. Item: Title: 4.11 Description of Banduia mediterranea sp. nov. Item: Title: 4.12 Description of Spectribacter gen. nov. Item: Title: 4.13 Description of Spectribacter hydrogenooxidans sp. nov. Item: Title: 4.14 Description of Spectribacter acetivorans sp. nov. Item: Title: 4.15 Description of Glaciecola petra sp. nov. Item: Title: 4.16 Description of Brumicola gen. nov. Item: Title: 4.17 Description of Brumicola pallidula comb. nov. Item: Title: 4.18 Description of Brumicola nitratireducens comb. nov. Item: Title: 4.19 Description of Brumicola blandensis sp. nov. Item: Title: 4.20 Description of Thalassotalea castellviae sp. nov. Item: Title: 4.21 Description of Patiriisocius hiemis sp. nov. Item: Title: 4.22 Description of Urechidicola vernalis sp. nov. Item: Title: 4.23 Description of Microcosmobacter gen. nov. Item: Title: 4.24 Description of Microcosmobacter mediterraneus sp. nov. Item: Title: 4.25 Description of Asprobacillus gen. nov. Item: Title: 4.26 Description of Asprobacillus argos sp. nov. Item: Title: 4.27 Description of Autumnicola gen. nov. Item: Title: 4.28 Description of Autumnicola musiva sp. nov. Item: Title: 4.29 Description of Autumnicola tepida sp. nov. Item: Title: 4.30 Description of Autumnicola patrickiae sp. nov. Item: Title: 4.31 Description of Autumnicola edwardsiae sp. nov. Item: Title: 4.32 Description of Autumnicola lenta sp. nov. Item: Title: 4.33 Description of Autumnicola psychrophila sp. nov. Item: Title: 4.34 Description of Croceitalea rosinachiae sp. nov. Item: Title: 4.35 Description of Croceitalea vernalis sp. nov. Item: Title: 4.36 Description of Pricia mediterranea sp. nov. Item: Title: 4.37 Description of Rubrivirga litoralis sp. nov. Item: Title: Data availability statement Item: Title: Author contributions Item: Title: References Info: Title: Genomic and phenotypic characterization of 26 novel marine bacterial strains with relevant biogeochemical roles and widespread presence across the global ocean Author: Xavier Rey-Velasco Subject: Prokaryotes dominate global oceans and shape biogeochemical cycles, yet most taxa remain uncultured and uncharacterized as of today. 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