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Title:           Swine farm environmental microbiome: exploring microbial ecology and functionality across farms with high and low sanitary status
Subject:         Introduction: Stringent regulations in pig farming, such as antibiotic control and the ban on certain additives and disinfectants, complicate disease control efforts.
Author:          Clara Marin; Lourdes Migura-García; Juan Carlos Rodríguez; María-Paz Ventero; Maria Teresa Pérez-Gracia; Santiago Vega; Carla Tort-Miró; Ana Marco-Fuertes; Laura Lorenzo-Rebenaque; Laura Montoro-Dasi
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      Title: Swine farm environmental microbiome: exploring microbial ecology and functionality across farms with high and low sanitary status
      Children: 
       Item: 
        Title: 1 Introduction
       Item: 
        Title: 2 Materials and methods
        Children: 
         Item: 
          Title: 2.1 Study sample
         Item: 
          Title: 2.2 Selection of high and low sanitary status farms to define “healthy” and “unhealthy” microbiomes
         Item: 
          Title: 2.3 Sampling
         Item: 
          Title: 2.4 DNA extraction, 16S rRNA gene amplification, and MiSeq sequencing
         Item: 
          Title: 2.5 Bioinformatic analysis
         Item: 
          Title: 2.6 Statistical analysis
         Item: 
          Title: 2.7 Bacterial functional annotation and distribution
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        Title: 3 Results
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         Item: 
          Title: 3.1 16S rRNA sequencing
         Item: 
          Title: 3.2 Taxonomic characterisation of environmental microbial communities
         Item: 
          Title: 3.3 Sanitary status environmental microbiota modulation
         Item: 
          Title: 3.4 Bacterial functional annotation and distribution
       Item: 
        Title: 4 Discussion
       Item: 
        Title: Data availability statement
       Item: 
        Title: Author contributions
     Item: 
      Title: References
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