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Genetic drivers of SLE epigenetic signals and mediation role of DNAm on SLE risk Destination: B3 Item: Title: Context-dependent meQTL regulatory function in SLE Destination: B4 Item: Title: SLE-associated epigenetic signals correlate with transcription factor activity and cytokine production Destination: B5 Item: Title: SLE-associated epigenetic signals inform drug discovery Destination: B6 Item: Title: Discussion Destination: A2 Item: Title: Methods Destination: A3 Children: Item: Title: Samples Destination: B7 Item: Title: Ethical declaration Destination: B8 Item: Title: DNAm profiling Destination: B9 Item: Title: Genetic profiling Destination: B10 Item: Title: Epigenome-wide association analyses Destination: B11 Item: Title: Functional enrichment analyses Destination: B12 Item: Title: Methylation quantitative trait loci analysis Destination: B13 Item: Title: Genetic association and mediation analyses Destination: B14 Item: Title: Epigenetic associations with cytokine levels and transcription factor activities (TFact) Destination: B15 Item: Title: Identification of drug targets within epigenetic signals Destination: B16 Item: Title: Reporting summary Destination: B17 Item: Title: Data availability Destination: A4 Item: Title: Code availability Destination: A5 Item: Title: References Destination: A6 Item: Title: Acknowledgements Destination: A7 Item: Title: Author contributions Destination: A8 Item: Title: Funding Destination: A9 Item: Title: Competing interests Destination: A10 Item: Title: Additional information Destination: M3 Info: Title: Molecular subtypes explain lupus epigenomic heterogeneity unveiling new regulatory genetic risk variants Author: Olivia Castellini-Pérez Subject: npj Genomic Medicine, doi:10.1038/s41525-024-00420-0 Keywords: Creator: Springer Producer: iText® 5.3.5 ©2000-2012 1T3XT BVBA (SPRINGER SBM; licensed version) CreationDate: Tue Jul 16 15:36:34 CEST 2024 ModDate: Tue Jul 16 20:17:12 CEST 2024 ID: 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JHNHJL+AdvOT34fe1490.B FontSubset: true FirstChar: 38 LastChar: 250 FontDescriptor: FontName: JHNHJL+AdvOT34fe1490.B Flags: Nonsymbolic FontBBox: -52, -208, 937, 968 FontFile3: true Encoding: WinAnsiEncoding Font: BaseFont: JHNHJM+AdvOTf0129623 FontSubset: true FirstChar: 37 LastChar: 252 FontDescriptor: FontName: JHNHJM+AdvOTf0129623 Flags: Nonsymbolic FontBBox: -52, -208, 906, 947 FontFile3: true Encoding: WinAnsiEncoding XMP: application/pdf doi:10.1038/s41525-024-00420-0 Molecular subtypes explain lupus epigenomic heterogeneity unveiling new regulatory genetic risk variants Olivia Castellini-Pérez Elena Povedano Guillermo Barturen Manuel Martínez-Bueno Andrii Iakovliev Martin Kerick Raúl López-Domínguez Concepción Marañón Javier Martín Esteban Ballestar Lorenzo Beretta Barbara Vigone Jacques‐Olivier Pers Alain Saraux Valérie Devauchelle‐Pensec Divi Cornec Sandrine Jousse‐Joulin Bernard Lauwerys Julie Ducreux Anne‐Lise Maudoux Carlos Vasconcelos Ana Tavares Esmeralda Neves Raquel Faria Mariana Brandão Ana Campar António Marinho Fátima Farinha Isabel Almeida Miguel Angel Gonzalez‐Gay Mantecón Ricardo Blanco Alonso Alfonso Corrales Martínez Ricard Cervera Ignasi Rodríguez‐Pintó Gerard Espinosa Rik Lories Ellen De Langhe Nicolas Hunzelmann Doreen Belz Torsten Witte Niklas Baerlecken Georg Stummvoll Michael Zauner Michaela Lehner Eduardo Collantes Rafaela Ortega Castro Ma Angeles Aguirre‐Zamorano Alejandro Escudero‐Contreras Ma Carmen Castro‐Villegas Norberto Ortego María Concepción Fernández Roldán Enrique Raya Inmaculada Jiménez Moleón Enrique de Ramon Isabel Díaz Quintero Pier Luigi Meroni Maria Gerosa Tommaso Schioppo Carolina Artusi Carlo Chizzolini Aleksandra Zuber Donatienne Wynar Laszló Kovács Attila Balog Magdolna Deák Márta Bocskai Sonja Dulic Gabriella Kádár Falk Hiepe Velia Gerl Silvia Thiel Manuel Rodriguez Maresca Antonio López‐Berrio Rocío Aguilar‐Quesada Héctor Navarro‐Linares Montserrat Alvarez Damiana Alvarez‐Errico Nancy Azevedo Nuria Barbarroja Anne Buttgereit Qingyu Cheng Carlo Chizzolini Jonathan Cremer Aurélie De Groof Ellen De Langhe Julie Ducreux Aleksandra Dufour Velia Gerl Maria Hernandez‐Fuentes Laleh Khodadadi Katja Kniesch Tianlu Li Chary Lopez‐Pedrera Zuzanna Makowska Concepción Marañón Brian Muchmore Esmeralda Neves Bénédicte Rouvière Quentin Simon Elena Trombetta Nieves Varela Torsten Witte María Orietta Borghi Weiliang Qiu Cheng Zhu Srinivas Shankara Athina Spiliopoulou Emanuele Rinaldis Elena Carnero-Montoro Marta E. Alarcón-Riquelme Springer US npj Genomic Medicine, doi:10.1038/s41525-024-00420-0 10.1038/s41525-024-00420-0 http://dx.doi.org/10.1038/s41525-024-00420-0 journal npj Genomic Medicine © 2024, The Author(s) 2056-7944 10.1038/s41525-024-00420-0 springer.com springerlink.com 2010-04-23 True 10.1038/s41525-024-00420-0 springer.com springerlink.com Springer 2024-07-16T20:17:12+02:00 2024-07-16T18:36:34+05:30 2024-07-16T20:17:12+02:00 True VoR uuid:7e87a70d-1e06-4bcd-a24e-f77d3cf773a7 uuid:a1ba2630-acd6-4a7c-b4df-1db7b17a6fb1 default 1 converted uuid:c8069391-615b-4a08-b593-11c632265f18 converted to PDF/A-2b pdfToolbox 2024-07-16T18:37:33+05:30 2 B Olivia Castellini-Pérez http://orcid.org/0000-0001-9985-1371 Guillermo Barturen http://orcid.org/0000-0003-2103-1028 Martin Kerick http://orcid.org/0000-0002-6298-4514 Raúl López-Domínguez http://orcid.org/0000-0001-8634-117X Javier Martín http://orcid.org/0000-0002-2202-0622 Esteban Ballestar http://orcid.org/0000-0002-1400-2440 María Orietta Borghi http://orcid.org/0000-0001-8967-9678 Athina Spiliopoulou http://orcid.org/0000-0002-5929-6585 Marta E. 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