Results overview: Found 5 records in 0.02 seconds.
Articles, 4 records found
Research literature, 1 records found
Articles 4 records found  
1.
63 p, 25.7 MB A draft human pangenome reference / Liao, Wen-Wei (Washington University School of Medicine) ; Asri, Mobin (University of California) ; Ebler, Jana (Heinrich Heine University) ; Doerr, Daniel (Heinrich Heine University) ; Haukness, Marina (University of California) ; Hickey, Glenn (University of California) ; Lu, Shuangjia (Yale University School of Medicine) ; Lucas, Julian K. (University of California) ; Monlong, Jean (University of California) ; Abel, Haley J. (Washington University School of Medicine) ; Buonaiuto, Silvia (Consiglio Nazionale delle Ricerche. Istituto di Genetica e Biofisica) ; Chang, Xian H. (University of California) ; Cheng, Haoyu (Harvard Medical School) ; Chu, Justin (Dana-Farber Cancer Institute (Boston, Estats Units d'Amèrica)) ; Colonna, Vincenza (University of Tennessee Health Science Center) ; Eizenga, Jordan (University of California) ; Feng, Xiaowen (Harvard Medical School) ; Fischer, Christian (University of Tennessee Health Science Center) ; Fulton, Robert S. (Washington University School of Medicine) ; Garg, Shilpa (Technical University of Denmark) ; Groza, Cristian (McGill University) ; Guarracino, Andrea (Tecnopolo umano. Centro di ricerca sulla genomica) ; Harvey, William T. (University of Washington School of Medicine) ; Heumos, Simon (University of Tübingen) ; Howe, Kerstin (Wellcome Trust Sanger Institute (Regne Unit)) ; Jain, Miten (Northeastern University (USA)) ; Lu, Tsung-Yu (University of Southern California) ; Markello, Charles (University of California) ; Martin, Fergal J. (Wellcome Genome Campus (UK)) ; Mitchell, Matthew W. (Coriell Institute for Medical Research (USA)) ; Munson, Katherine M. (University of Washington School of Medicine) ; Mwaniki, Moses Njagi (Università di Pisa) ; Novak, Adam M. (University of California) ; Olsen, Hugh E. (University of California) ; Pesout, Trevor (University of California) ; Porubsky, David (University of Washington School of Medicine) ; Prins, Pjotr (University of Tennessee Health Science Center) ; Sibbesen, Jonas A. (University of Copenhagen) ; Sirén, Jouni (University of California) ; Tomlinson, Chad (Washington University School of Medicine) ; Villani, Flavia (University of Tennessee Health Science Center) ; Vollger, Mitchell R. (University of Washington School of Medicine) ; Antonacci-Fulton, Lucinda L. (Washington University School of Medicine) ; Baid, Gunjan (Google (USA)) ; Baker, Carl A. (University of Washington School of Medicine) ; Belyaeva, Anastasiya (Google (USA)) ; Billis, Konstantinos (Wellcome Genome Campus (UK)) ; Carroll, Andrew (Google (USA)) ; Chang, Pi-Chuan (Google (USA)) ; Cody, Sarah (Washington University School of Medicine) ; Cook, Daniel E. (Google (USA)) ; Cook-Deegan, Robert M. (Arizona State University) ; Cornejo, Omar E. (University of California) ; Diekhans, Mark (University of California) ; Ebert, Peter (Heinrich Heine University) ; Fairley, Susan (Wellcome Genome Campus (UK)) ; Fedrigo, Olivier (The Rockefeller University) ; Felsenfeld, Adam L. (National Institutes of Health (USA)) ; Formenti, Giulio (The Rockefeller University) ; Frankish, Adam (Wellcome Genome Campus (UK)) ; Gao, Yan (The Children's Hospital of Philadelphia) ; Garrison, Nanibaa' A. (University of California) ; Giron, Carlos Garcia (Wellcome Genome Campus (UK)) ; Green, Richard E. (Dovetail Genomics) ; Haggerty, Leanne (Wellcome Genome Campus (UK)) ; Hoekzema, Kendra (University of Washington School of Medicine) ; Hourlier, Thibaut (Wellcome Genome Campus (UK)) ; Ji, Hanlee P. (Stanford University School of Medicine) ; Kenny, Eimear E. (Icahn School of Medicine at Mount Sinai) ; Koenig, Barbara A. (University of California) ; Kolesnikov, Alexey (Google (USA)) ; Korbel, Jan O. (European Molecular Biology Laboratory) ; Kordosky, Jennifer (University of Washington School of Medicine) ; Koren, Sergey (National Institutes of Health (USA)) ; Lee, HoJoon (Stanford University School of Medicine) ; Lewis, Alexandra P. (University of Washington School of Medicine) ; Magalhães, Hugo (Heinrich Heine University) ; Marco-Sola, Santiago (Universitat Autònoma de Barcelona. Departament d'Arquitectura de Computadors i Sistemes Operatius) ; Marijon, Pierre (Heinrich Heine University) ; McCartney, Ann (National Institutes of Health (USA)) ; McDaniel, Jennifer (National Institute of Standards and Technology (USA)) ; Mountcastle, Jacquelyn (The Rockefeller University) ; Nattestad, Maria (Google (USA)) ; Nurk, Sergey (National Institutes of Health (USA)) ; Olson, Nathan D. (National Institute of Standards and Technology (USA)) ; Popejoy, Alice B. (University of California) ; Puiu, Daniela (Johns Hopkins University) ; Rautiainen, Mikko (National Institutes of Health (USA)) ; Regier, Allison A. (Washington University School of Medicine) ; Rhie, Arang (National Institutes of Health (USA)) ; Sacco, Samuel (University of California) ; Sanders, Ashley D. (Max Delbrück Center for Molecular Medicine in the Helmholtz Association) ; Schneider, Valerie A. (National Institutes of Health (USA)) ; Schultz, Baergen I. (National Institutes of Health (USA)) ; Shafin, Kishwar (Google (USA)) ; Smith, Michael W. (National Institutes of Health (USA)) ; Sofia, Heidi J. (National Institutes of Health (USA)) ; Abou Tayoun, Ahmad N. (Mohammed Bin Rashid University of Medicine and Health Sciences) ; Thibaud-Nissen, Françoise (National Institutes of Health (USA)) ; Tricomi, Francesca Floriana (Wellcome Genome Campus (UK)) ; Wagner, Justin (National Institute of Standards and Technology (USA)) ; Walenz, Brian (National Institutes of Health (USA)) ; Wood, Jonathan M. D. (Wellcome Trust Sanger Institute (Regne Unit)) ; Zimin, Aleksey V. (Johns Hopkins University) ; Bourque, Guillaume (Kyoto University) ; Chaisson, Mark (University of Southern California) ; Flicek, Paul (Wellcome Genome Campus (UK)) ; Phillippy, Adam M. (National Institutes of Health (USA)) ; Zook, Justin M. (National Institute of Standards and Technology (USA)) ; Eichler, Evan E. (Howard Hughes Medical Institute) ; Haussler, David (Howard Hughes Medical Institute) ; Wang, Ting (Washington University School of Medicine) ; Jarvis, Erich (The Rockefeller University) ; Miga, Karen H. (University of California) ; Garrison, Erik (University of Tennessee Health Science Center) ; Marschall, Tobias (Heinrich Heine University) ; Hall, Ira M. (Yale University School of Medicine) ; Li, Heng (Harvard Medical School) ; Paten, Benedict (University of California)
Here the Human Pangenome Reference Consortium presents a first draft of the human pangenome reference. The pangenome contains 47 phased, diploid assemblies from a cohort of genetically diverse individuals1. [...]
2023 - 10.1038/s41586-023-05896-x
Nature, Vol. 617 (May 2023) , p. 312-324  
2.
7 p, 1.5 MB A high-quality, long-read genome assembly of the endangered ring-tailed lemur (Lemur catta) / Palmada-Flores, Marc (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Orkin, Joseph (Université de Montréal. Département d'anthropologie) ; Haase, Bettina (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Mountcastle, Jacquelyn (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Bertelsen, Mads (University of Copenhagen. Department of Veterinary and Animal Sciences) ; Fedrigo, Olivier (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Kuderna, Lukas (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Jarvis, Erich (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont)
Background: The ring-tailed lemur (Lemur catta) is a charismatic strepsirrhine primate endemic to Madagascar. These lemurs are of particular interest, given their status as a flagship species and widespread publicity in the popular media. [...]
2022 - 10.1093/gigascience/giac026
GigaScience, Vol. 11, Num. 1 (April 2022) , art. giac026  
3.
7 p, 1.4 MB The Earth BioGenome Project 2020: Starting the clock / Lewin, Harris A. (University of California Davis. Department of Evolution and Ecology (USA)) ; Richards, Stephen (University of California Davis. Genome Center) ; Aiden, Erez (Baylor College of Medicine) ; Allende, Miguel L. (Universidad de Chile. Center for Genome Regulation) ; Archibald, John M. (Dalhousie University. Department of Biochemistry & Molecular Biology) ; Bálint, Miklós M. (Senckenberg Leibniz Institution for Biodiversity and Earth System Research. LOEWE Centre of Translational Biodiversity Genomics) ; Barker, Katharine M. (Smithsonian Institution. National Museum of Natural History) ; Baumgartnerk, Bridget (Revive & Restore (USA)) ; Belov, Katherine (University of Sydney. School of Life and Environmental Sciences) ; Bertorelle, Giorgio (University of Ferrara. Department of Life Sciences and Biotechnology) ; Blaxter, Mark (Wellcome Sanger Institute (Cambridge)) ; Cai, Jing (Northwestern Polytechnical University. School of Ecology and Environment (China)) ; Caperello, Nicolette (University of California Davis. Genome Center) ; Carlson, Keith (University of California Santa Barbara) ; Castilla-Rubio, Juan Carlos (Spacetime Ventures (Brazil)) ; Chaw, Shu-Miaw (Academia Sinica. Biodiversity Research Center (Taiwan)) ; Chen, Lei (Northwestern Polytechnical University. School of Ecology and Environment (China)) ; Childers, Anna K. (US Department of Agriculture. Beltsville Agricultural Research Center) ; Coddington, Jonathan A. (Smithsonian Institution. National Museum of Natural History) ; Conde, Dalia A. (University of Southern Denmark. Department of Biology) ; Corominas, Montserrat (Universitat de Barcelona. Departament de Genètica, Microbiologia i Estadística) ; Crandall, Keith A. (George Washington University. Department of Biostatistics & Bioinformatics) ; Crawford, Andrew J. (Universidad de los Andes. Department of Biological Sciences (Colombia)) ; Di Palma, Federica (Genome British Columbia (Vancouver)) ; Durbin, Richard (University of Cambridge. Department of Genetics) ; Ebenezer, ThankGod E. (Wellcome Genome Campus. European Bioinformatics Institute) ; Edwards, Scott (Harvard University. Department of Organismic and Evolutionary Biology) ; Fedrigo, Olivier (The Rockefeller University. Laboratory of the Neurogenetics of Language (USA)) ; Flicek, Paul (Wellcome Trust Sanger Institute (Regne Unit)) ; Formenti, Giulio (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Gibbs, Richard A. (Baylor College of Medicine. Human Genome Sequencing Center) ; Gilbert, M. Thomas P. (University of Copenhagen. The GLOBE Institute) ; Goldstein, Melissa M. (George Washington University. Department of Health Policy and Management) ; Marshall Graves, Jennifer A. (University of Canberra. Institute for Applied Ecology) ; Greely, Henry (Stanford University. Stanford Law School) ; Grigoriev, Igor (United States. Department of Energy. Joint Genome Institute) ; Hackett, Kevin J. (United States. Department of Agriculture. Agricultural Research Service) ; Hall, Neil (Norwich Research Park. Earlham Institute (UK)) ; Haussler, David (University of California Santa Cruz. Genome Institute (USA)) ; Helgen, Kristofer M. (Australian Museum Research Institute) ; Hogg, Carolyn J. (University of Sydney. School of Life and Environmental Sciences) ; Isobe, Sachiko (Kazusa DNA Research Institute. Department of Frontier Research and Development) ; Jakobsen, Kjetill Sigurd (University of Oslo. Department of Biosciences) ; Janke, Axel (Senckenberg Leibniz Institution for Biodiversity and Earth System Research. LOEWE Centre of Translational Biodiversity Genomics) ; Jarvis, Erich (The Rockefeller University. Laboratory of the Neurogenetics of Language (USA)) ; Johnson, Warren E. (Smithsonian Conservation Biology Institute) ; Jones, Steven J. M. (Canada's Michael Smith Genome Sciences Centre) ; Karlsson, Elinor K. (University of Massachusetts Medical School. Bioinformatics and Integrative Biology) ; Kersey, Paul J. (Royal Botanic Gardens Kew) ; Kim, Jin-Hyoung (Korea Polar Research Institute. Division of Life Sciences) ; Kress, W. John (Smithsonian Institution. National Museum of Natural History) ; Kuraku, Shigehiro (National Institute of Genetics. Department of Genomics and Evolutionary Biology) ; Lawniczak, Mara K. N. (Wellcome Sanger Institute (Cambridge)) ; Leebens-Mack, James H. (University of Georgia. Department of Plant Biology) ; Li, Xueyan (Chinese Academy of Sciences. Kunming Institute of Zoology) ; Lindblad-Toh, Kerstin (Uppsala University. Department of Medical Biochemistry & Microbiology) ; Liu, Xin (Beijing Genomics Institute-Shenzhen) ; Lopez, Jose V. (Nova Southeastern University. Department of Biological Sciences) ; Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont) ; Mazard, Sofhie (Macquarie University. Bioplatforms Australia) ; Mazet, Jonna (University of California Davis. One Health Institute) ; Mazzoni, Camila J. (Berlin Center for Genomics in Biodiversity Research) ; Myers, Eugene W. (Max Planck Institute of Molecular Cell Biology and Genetics (Germany)) ; O'Neill, Rachel J. (University of Connecticut. Institute for Systems Genomics) ; Paez, Sadye (The Rockefeller University. Laboratory of the Neurogenetics of Language (USA)) ; Park, Hyun (Korea University. Division of Biotechnology) ; Robinson, Gene (University of Illinois at Urbana−Champaign. Department of Entomology) ; Roquet, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia) ; Ryder, Oliver A (University of California San Diego. Department of Evolution, Behavior, and Ecology (USA)) ; Sabir, Jamal S. M. (King Abdulaziz University. Department of Biological Sciences (Saudi Arabia)) ; Shaffer, Howard Bradley (University of California, Los Angeles. Department of Ecology and Evolutionary Biology) ; Shank, Timothy M. (Woods Hole Oceanographic Institution) ; Sherkow, Jacob S. (University of Illinois at Urbana−Champaign. Department of Entomology) ; Soltis, Pamela (University of Florida. Florida Museum of Natural History) ; Tang, Boping (Yancheng Teachers University. School of Wetlands (China)) ; Tedersoo, Leho (University of Tartu. Center of Mycology and Microbiology) ; Uliano da Silva, Marcela (Wellcome Sanger Institute (Cambridge)) ; Wang, Kun (Northwestern Polytechnical University. School of Ecology and Environment (China)) ; Wei, Xiaofeng (Beijing Genomics Institute-Shenzhen) ; Wetzer, Regina (University of Southern California, Los Angeles. Biological Sciences) ; Wilson, Julia L. (Wellcome Sanger Institute (Cambridge)) ; Xu, Xun (Beijing Genomics Institute-Shenzhen) ; Yang, Huanming (Beijing Genomics Institute-Shenzhen) ; Yoder, Anne (Duke University, Durham. Department of Biology) ; Zhang, Guojie (Beijing Genomics Institute-Shenzhen)
2022 - 10.1073/pnas.2115635118
Proceedings of the National Academy of Sciences of the United States of America, Vol. 119, Num. 4 (2022) , art. e2115635118  
4.
32 p, 22.5 MB Towards complete and error-free genome assemblies of all vertebrate species / Rhie, Arang (National Institutes of Health. National Human Genome Research Institute (USA)) ; McCarthy, Shane A. (University of Cambridge. Department of Genetics (UK)) ; Fedrigo, Olivier (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Damas, Joana (University of California Davis. The Genome Center (USA)) ; Formenti, Giulio (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Koren, Sergey (National Institutes of Health. National Human Genome Research Institute (USA)) ; Uliano da Silva, Marcela (Leibniz Institute for Zoo and Wildlife Research. Department of Evolutionary Genetics (Germany)) ; Chow, William (Wellcome Trust Sanger Institute (Regne Unit)) ; Fungtammasan, Arkarachai (DNAnexus Inc. (USA)) ; Kim, Juwan (Seoul National University. Interdisciplinary Program in Bioinformatics (Republic of Korea)) ; Lee, Chul (Seoul National University. Interdisciplinary Program in Bioinformatics (Republic of Korea)) ; Ko, Byung June (Seoul National University. Department of Agricultural Biotechnology (Republic of Korea)) ; Chaisson, Mark (University of Southern California (USA)) ; Gedman, Gregory L. (The Rockefeller University. Laboratory of Neurogenetics of Language (USA)) ; Cantin, Lindsey J. (The Rockefeller University. Laboratory of Neurogenetics of Language (USA)) ; Thibaud-Nissen, Françoise (National Library of Medicine. National Center for Biotechnology Information (USA)) ; Haggerty, Leanne (European Bioinformatics Institute. European Molecular Biology Laboratory (UK)) ; Bista, Iliana (University of Cambridge. Department of Genetics (UK)) ; Smith, Michelle (Wellcome Trust Sanger Institute (Regne Unit)) ; Haase, Bettina (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Mountcastle, Jacquelyn (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Winkler, Sylke (Max Planck Institute of Molecular Cell Biology and Genetics (Germany)) ; Paez, Sadye (The Rockefeller University. Vertebrate Genome Lab (USA)) ; Howard, Jason (Novogene (USA)) ; Vernes, Sonja C. (Donders Institute for Brain, Cognition and Behaviour (The Netherlands)) ; Lama, Tanya M. (University of Massachusetts. Cooperative Fish and Wildlife Research Unit (USA)) ; Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont) ; Warren, Wesley (University of Missouri. Bond Life Sciences Center (USA)) ; Balakrishnan, Christopher N. (East Carolina University. Department of Biology (USA)) ; Burt, Dave (University of Queensland. UQ Genomics (Australia)) ; George, Julia M. (Clemson University. Department of Biological Sciences (USA)) ; Biegler, Matthew T. (The Rockefeller University. Laboratory of Neurogenetics of Language (USA)) ; Iorns, David (The Genetic Rescue Foundation (New Zealand)) ; Digby, Andrew (Kākāpō Recovery, Department of Conservation (New Zealand)) ; Eason, Daryl (Kākāpō Recovery, Department of Conservation (New Zealand)) ; Robertson, Bruce (University of Otago. Department of Zoology (New Zealand)) ; Edwards, Taylor (University of Arizona Genetics Core (USA)) ; Wilkinson, Mark (Natural History Museum. Department of Life Sciences (UK)) ; Turner, George (Bangor University. School of Natural Sciences (UK)) ; Meyer, Axel (University of Konstanz. Department of Biology (Germany)) ; Kautt, Andreas F. (University of Konstanz. Department of Biology (Germany)) ; Franchini, Paolo (University of Konstanz. Department of Biology (Germany)) ; Detrich III, H. William (Northeastern University Marine Science Center. Department of Marine and Environmental Sciences (USA)) ; Svardal, Hannes (University of Antwerp. Department of Biology (Belgium)) ; Wagner, Maximilian (Karl-Franzens University of Graz. Institute of Biology (Austria)) ; Naylor, Gavin J. P. (University of Florida. Florida Museum of Natural History (USA)) ; Pippel, Martin (Max Planck Institute of Molecular Cell Biology and Genetics (Germany)) ; Malinsky, Milan (University of Basel. Zoological Institute (Switzerland)) ; Mooney, Mark (Tag.bio (USA)) ; Simbirsky, Maria (DNAnexus Inc. (USA)) ; Hannigan, Brett T. (DNAnexus Inc. (USA)) ; Pesout, Trevor (University of California. UC Santa Cruz Genomics Institute (USA)) ; Houck, Marlys (San Diego Zoo Global (USA)) ; Misuraca, Ann (San Diego Zoo Global (USA)) ; Kingan, Sarah B. (Pacific Biosciences (USA)) ; Hall, Richard (Pacific Biosciences (USA)) ; Kronenberg, Zev (Pacific Biosciences (USA)) ; Sović, Ivan (Pacific Biosciences (USA)) ; Dunn, Christopher (Pacific Biosciences (USA)) ; Ning, Zemin (Wellcome Trust Sanger Institute (Regne Unit)) ; Hastie, Alex (Bionano Genomics (USA)) ; Lee, Joyce (Bionano Genomics (USA)) ; Selvaraj, Siddarth (Arima Genomics (USA)) ; Green, Richard E. (University of California. UC Santa Cruz Genomics Institute (USA)) ; Putnam, Nicholas H. (Independent Researcher. Santa Cruz (USA)) ; Gut, Ivo (Centro Nacional de Análisis Genómico. Instituto de Ciencia y Tecnología de Barcelona) ; Ghurye, Jay (University of Maryland College Park. Department of Computer Science (USA)) ; Garrison, Erik (University of California. UC Santa Cruz Genomics Institute (USA)) ; Sims, Ying (Wellcome Trust Sanger Institute (Regne Unit)) ; Collins, Joanna (Wellcome Trust Sanger Institute (Regne Unit)) ; Pelan, Sarah (Wellcome Trust Sanger Institute (Regne Unit)) ; Torrance, James (Wellcome Trust Sanger Institute (Regne Unit)) ; Tracey, Alan (Wellcome Trust Sanger Institute (Regne Unit)) ; Wood, Jonathan (Wellcome Trust Sanger Institute (Regne Unit)) ; Dagnew, Robel E. (University of Southern California (USA)) ; Guan, Dengfeng (Harbin Institute of Technology. Center for Bioinformatics. School of Computer Science and Technology (China)) ; London, Sarah E. (University of Chicago. Institute for Mind and Biology. Department of Psychology (USA)) ; Clayton, David F. (Clemson University. Department of Genetics and Biochemistry (USA)) ; Mello, Claudio V. (Oregon Health and Science University. Department of Behavioral Neuroscience (USA)) ; Friedrich, Samantha R. (Oregon Health and Science University. Department of Behavioral Neuroscience (USA)) ; Lovell, Peter V. (Oregon Health and Science University. Department of Behavioral Neuroscience (USA)) ; Osipova, Ekaterina (Max Planck Institute for the Physics of Complex Systems (Germany)) ; Al-Ajli, Farooq O. (Monash University Malaysia. Tropical Medicine and Biology Multidisciplinary Platform (Malaysia)) ; Secomandi, Simona (University of Milan. Department of Biosciences (Italy)) ; Kim, Heebal (Seoul National University. Interdisciplinary Program in Bioinformatics (Republic of Korea)) ; Theofanopoulou, Constantina (The Rockefeller University. Laboratory of Neurogenetics of Language (USA)) ; Hiller, Michael (Goethe-University. Faculty of Biosciences (Germany)) ; Zhou, Yang (BGI-Shenzhen (China)) ; Harris, Robert S. (Pennsylvania State University. Department of Biology (USA)) ; Makova, Kateryna D. (Pennsylvania State University. Department of Biology (USA)) ; Medvedev, Paul (Pennsylvania State University. Center for Medical Genomics (USA)) ; Hoffman, Jinna (National Library of Medicine. National Center for Biotechnology Information (USA)) ; Masterson, Patrick (National Library of Medicine. National Center for Biotechnology Information (USA)) ; Clark, Karen (National Library of Medicine. National Center for Biotechnology Information (USA)) ; Martin, Fergal J. (European Bioinformatics Institute. European Molecular Biology Laboratory (UK)) ; Howe, Kevin (European Bioinformatics Institute. European Molecular Biology Laboratory (UK)) ; Flicek, Paul (European Bioinformatics Institute. European Molecular Biology Laboratory (UK)) ; Walenz, Brian P. (National Institutes of Health. National Human Genome Research Institute (USA)) ; Kwak, Woori (eGnome, Inc. (Republic of Korea)) ; Clawson, Hiram (University of California. UC Santa Cruz Genomics Institute (USA)) ; Diekhans, Mark (University of California. UC Santa Cruz Genomics Institute (USA)) ; Nassar, Luis (University of California. UC Santa Cruz Genomics Institute (USA)) ; Paten, Benedict (University of California. UC Santa Cruz Genomics Institute (USA)) ; Kraus, Robert H. S. (Max Planck Institute of Animal Behavior. Department of Migration (Germany)) ; Crawford, Andrew J. (Universidad de los Andes. Department of Biological Sciences (Colombia)) ; Gilbert, M. Thomas P. (University of Copenhagen. The GLOBE Institute. Center for Evolutionary Hologenomics (Denmark)) ; Zhang, Guojie (Chinese Academy of Sciences. Center for Excellence in Animal Evolution and Genetics (China)) ; Venkatesh, Byrappa (A*STAR. Institute of Molecular and Cell Biology (Singapore)) ; Murphy, Robert W. (Royal Ontario Museum. Centre for Biodiversity (Canada)) ; Koepfli, Klaus-Peter (Smithsonian Conservation Biology Institute) ; Shapiro, Beth (Howard Hughes Medical Institute (USA)) ; Johnson, Warren E. (Smithsonian Conservation Biology Institute) ; Di Palma, Federica (University of East Anglia. Earlham Institute. Department of Biological Sciences (UK)) ; Teeling, Emma C. (University College Dublin. School of Biology and Environmental Science (Ireland)) ; Warnow, Tandy (The University of Illinois at Urbana-Champaign. Department of Computer Science (USA)) ; Graves, Jennifer Marshall (La Trobe University. School of Life Science (Australia)) ; Ryder, Oliver A. (University of California San Diego. Department of Evolution, Behavior, and Ecology (USA)) ; Haussler, David (University of California Santa Cruz. Department of Ecology and Evolutionary Biology (USA)) ; O'Brien, Stephen J. (ITMO University. Laboratory of Genomics Diversity-Center for Computer Technologies (Russian Federation)) ; Korlach, Jonas (Pacific Biosciences (USA)) ; Lewin, Harris A. (University of California Davis. John Muir Institute for the Environment (USA)) ; Howe, Kerstin (Wellcome Trust Sanger Institute (Regne Unit)) ; Myers, Eugene W. (Max Planck Institute of Molecular Cell Biology and Genetics (Germany)) ; Durbin, Richard (University of Cambridge. Department of Genetics (UK)) ; Phillippy, Adam M. (National Institutes of Health. National Human Genome Research Institute (USA)) ; Jarvis, Erich (The Rockefeller University. Vertebrate Genome Lab (USA))
High-quality and complete reference genome assemblies are fundamental for the application of genomics to biology, disease, and biodiversity conservation. However, such assemblies are available for only a few non-microbial species 1, 2, 3, 4. [...]
2021 - 10.1038/s41586-021-03451-0
Nature, Vol. 592 (April 2021) , p. 737-746  

Research literature 1 records found  
1.
29 p, 2.9 MB Scalable, accessible, and reproducible reference genome assembly and evaluation in Galaxy / Larivière, Delphine (Pennsylvania State University) ; Abueg, Linelle Ann L. (The Rockefeller University) ; Brajuka, Nadolina (The Rockefeller University) ; Gallardo, Cristobal (Albert-Ludwigs-University Freiburg) ; Grüning, Björn (Albert-Ludwigs-University Freiburg) ; Ko, Byung June (Seoul National University) ; Ostrovsky, Alexander (Johns Hopkins University) ; Palmada-Flores, Marc (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Pickett, Brandon (National Institutes of Health. National Human Genome Research Institute (USA)) ; Rabbani, Keon (University of Southern California) ; Balacco, Jennifer (The Rockefeller University) ; Chaisson, Mark (University of Southern California) ; Cheng, Haoyu (Harvard Medical School) ; Collins, Joanna (Wellcome Sanger Institute (Regne Unit)) ; Denisova, Alexandra (Lomonosov Moscow State University) ; Fedrigo, Olivier (The Rockefeller University) ; Gallo, Guido (Università degli Studi di Milano) ; Giani, Alice Maria (Weill Cornell Medical College (USA)) ; Gooder, Grenville MacDonald (The Rockefeller University) ; Jain, Nivesh (The Rockefeller University) ; Johnson, Cassidy (The Rockefeller University) ; Kim, Heebal (Seoul National University) ; Lee, Chul (The Rockefeller University) ; Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont) ; O'Toole, Brian (The Rockefeller University) ; Rhie, Arang (National Institutes of Health. National Human Genome Research Institute (USA)) ; Secomandi, Simona (University of Cyprus) ; Sozzoni, Marcella (Università di Firenze) ; Tilley, Tatiana (The Rockefeller University) ; Uliano da Silva, Marcela (Wellcome Sanger Institute (Regne Unit)) ; van den Beek, Marius (Pennsylvania State University) ; Waterhouse, Robert (University of Lausanne) ; Phillippy, Adam M. (National Institutes of Health. National Human Genome Research Institute (USA)) ; Jarvis, Erich (The Rockefeller University) ; Schatz, Michael (Johns Hopkins University) ; Nekrutenko, Anton (Pennsylvania State University) ; Formenti, Giulio (The Rockefeller University)
Improvements in genome sequencing and assembly are enabling high-quality reference genomes for all species. However, the assembly process is still laborious, computationally and technically demanding, lacks standards for reproducibility, and is not readily scalable. [...]
2024 - 10.1101/2023.06.28.546576  

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