1.
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9 p, 3.1 MB |
Ecosystem Microbiome Science
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Zhu, Yong-Guan (Chinese Academy of Sciences) ;
Zhu, Dong (Chinese Academy of Sciences) ;
Rillig, Matthias C. (Freie Universität Berlin) ;
Yang, Yunfeng (Tsinghua University) ;
Chu, Haiyan (Chinese Academy of Sciences) ;
Chen, Qing-Lin (The University of Melbourne) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Cui, Hui-Ling (Chinese Academy of Sciences) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences)
The microbiome contributes to multiple ecosystem functions and services through its interactions with a complex environment and other organisms. To date, however, most microbiome studies have been carried out on individual hosts or particular environmental compartments. [...]
2023 - 10.1002/mlf2.12054
mLife, Vol. 2, Issue 1 (March 2023) , p. 2-10
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2.
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11 p, 3.2 MB |
Metagenomic insight into the global dissemination of the antibiotic resistome
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Zhang, Qi (Zhejiang University of Technology. College of Environment) ;
Xu, Nuohan (Zhejiang University of Technology. College of Environment) ;
Lei, Chaotang (Zhejiang University of Technology. College of Environment) ;
Chen, Bingfeng (Zhejiang University of Technology. College of Environment) ;
Wang, Tingzhang (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Ma, Yunting (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Lu, Tao (Zhejiang University of Technology. College of Environment) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Gillings, Michael (Macquarie University. School of Natural Sciences) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment) ;
Fu, Zhengwei (Zhejiang University of Technology. College of Environment) ;
Qian, Haifeng (Zhejiang University of Technology. College of Environment)
The global crisis in antimicrobial resistance continues to grow. Estimating the risks of antibiotic resistance transmission across habitats is hindered by the lack of data on mobility and habitat-specificity. [...]
2023 - 10.1002/advs.202303925
Advanced science, First published 23 October 2023, art. 2303925
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3.
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11 p, 2.7 MB |
Assessment of global health risk of antibiotic resistance genes
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Zhang, Zhenyan (Zhejiang University of Technology. College of Environment) ;
Zhang, Qi (Zhejiang University of Technology. College of Environment) ;
Wang, Tingzhang (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Xu, Nuohan (Zhejiang University of Technology. College of Environment) ;
Lu, Tao (Zhejiang University of Technology. College of Environment) ;
Hong, Wenjie (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Gillings, Michael (Macquarie University. ARC Centre of Excellence in Synthetic Biology) ;
Wang, Meixia (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Gao, Wenwen (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Qian, Haifeng (Zhejiang University of Technology. College of Environment)
Antibiotic resistance genes (ARGs) have accelerated microbial threats to human health in the last decade. Many genes can confer resistance, but evaluating the relative health risks of ARGs is complex. [...]
2022 - 10.1038/s41467-022-29283-8
Nature communications, Vol. 13 (March 2022) , art. 1553
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4.
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10 p, 1.2 MB |
Cyanobacterial blooms contribute to the diversity of antibiotic-resistance genes in aquatic ecosystems
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Zhang, Qi (Zhejiang University of Technology. College of Environment) ;
Zhang, Zhenyan (Zhejiang University of Technology. College of Environment) ;
Lu, Tao (Zhejiang University of Technology. College of Environment) ;
Peijnenburg, W. J. G. M. (Center for Safety of Substances and Products. National Institute of Public Health and the Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences) ;
Yang, Xiaoru (Chinese Academy of Sciences. Institute of Urban Environment) ;
Chen, Jianmeng (Zhejiang University of Technology. College of Environment) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Research Center for Ecoenvironmental Sciences. State Key Lab of Urban and Regional Ecology) ;
Zhou, Ningyi (Shanghai Jiao Tong University. State Key Laboratory of Microbial Metabolism, and School of Life Sciences & Biotechnology) ;
Su, Jianqiang (Chinese Academy of Sciences. Institute of Urban Environment) ;
Qian, Haifeng (Zhejiang University of Technology. College of Environment)
Cyanobacterial blooms are a global ecological problem that directly threatens human health and crop safety. Cyanobacteria have toxic effects on aquatic microorganisms, which could drive the selection for resistance genes. [...]
2020 - 10.1038/s42003-020-01468-1
Communications Biology, Vol. 3 (December 2020) , art. 737
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5.
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11 p, 608.8 KB |
Integrating biomedical, ecological, and sustainability sciences to manage emerging infectious diseases
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Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences (Australia)) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals)
Globalization accelerates the mobilization of microorganisms via international trade and transport. Growth in population, increasing connectivity, and rapid urbanization all exacerbate the consequent risk of pandemics of zoonotic diseases. [...]
2020 - 10.1016/j.oneear.2020.06.004
One Earth, Vol. 3, issue 1 (July 2020) , p. 23-26
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6.
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28 p, 579.3 KB |
Human dissemination of genes and microorganisms in Earth's Critical Zone
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Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences (Australia)) ;
Simonet, Pascal (Université de Lyon. Groupe de génomique microbienne environnementale) ;
Stekel, Dov (University of Nottingham) ;
Banwart, Steven (The University of Sheffield. Department of Geography) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals)
Earth's Critical Zone sustains terrestrial life and consists of the thin planetary surface layer between unaltered rock and the atmospheric boundary. Within this zone, flows of energy and materials are mediated by physical processes and by the actions of diverse organisms. [...]
2017 - 10.1111/gcb.14003
Global change biology, Vol. 24, Issue 4 (April 2018) , p. 1488-1499
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7.
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34 p, 1.8 MB |
Loss of soil microbial diversity exacerbates spread of antibiotic resistance
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Chen, Qing-Lin (Chinese Academy of Sciences. Institute of Urban Environment) ;
An, Xin-Li (Chinese Academy of Sciences. Institute of Urban Environment) ;
Zheng, Bang-Xiao (Chinese Academy of Sciences. Institute of Urban Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Cui, Li (Chinese Academy of Sciences. Institute of Urban Environment) ;
Su, Jian-Qiang (Chinese Academy of Sciences. Institute of Urban Environment) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment)
Loss of biodiversity is a major threat to the ecosystem processes upon which society depends. Natural ecosystems differ in their resistance to invasion by alien species, and this resistance can depend on the diversity in the system. [...]
2019 - 10.1007/s42832-019-0011-0
Soil ecology letters, Vol. 1, issue 1-2 (June 2019) , p. 3-13
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8.
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7 p, 1.3 MB |
Soil biota, antimicrobial resistance and planetary health
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Zhu, Yong-Guan (Chinese Academy of Sciences. Key Laboratory of Urban Environment and Health) ;
Zhao, Yi (University of Copenhagen. Department of Plant and Environmental Sciences) ;
Zhu, Dong (Chinese Academy of Sciences. Key Laboratory of Urban Environment and Health) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Ok, Yong Sik (Korea Biochar Research Center) ;
Capon, Anthony (University of Sydney. Planetary Health Platform) ;
Banwart, Steve (University of Leeds. School of Earth and Environment)
The concept of planetary health acknowledges the links between ecosystems, biodiversity and human health and well-being. Soil, the critical component of the interconnected ecosystem, is the most biodiverse habitat on Earth, and soil microbiomes play a major role in human health and well-being through ecosystem services such as nutrient cycling, pollutant remediation and synthesis of bioactive compounds such as antimicrobials. [...]
2019 - 10.1016/j.envint.2019.105059
Environment International, Vol. 131 (Oct. 2019) , art. 105059
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9.
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12 p, 1.8 MB |
Rhizosphere microorganisms can influence the timing of plant flowering
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Lu, Tao (Zhejiang University of Technology. College of Environment) ;
Ke, Mingjing (Zhejiang University of Technology. College of Environment) ;
Lavoie, Michel (Université Laval. Quebec-Ocean and Takuvik Joint International Research Unit) ;
Jin, Yujian (Zhejiang University of Technology. College of Environment) ;
Fan, Xiaoji (Zhejiang University of Technology. College of Environment) ;
Zhang, Zhenyan (Zhejiang University of Technology. College of Environment) ;
Fu, Zhengwei (Zhejiang University of Technology. College of Biotechnology and Bioengineering) ;
Sun, Liwei (Zhejiang University of Technology. College of Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Qian, Haifeng (Chinese Academy of Sciences. Xinjiang Key Laboratory of Environmental Pollution and Bioremediation) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Key Lab of Urban Environment and Health, Institute of Urban Environment)
Background:Plant phenology has crucial biological, physical, and chemical effects on the biosphere. Phenological drivers have largely been studied, but the role of plant microbiota, particularly rhizosphere microbiota, has not been considered. [...]
2018 - 10.1186/s40168-018-0615-0
Microbiome, Vol. 6 (December 2018) , art. 231
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10.
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5 p, 396.4 KB |
Microbial mass movements
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Zhu, Yong-Guan (Zhongguo ke xue yuan. Institute of Urban Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences) ;
Simonet, Pascal (Université de Lyon. Environmental Microbial Genomics Group) ;
Stekel, Dov (University of Nottingham. School of Biosciences) ;
Banwart, Steve (University of Leeds. School of the Earth & Environment) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals)
For several billion years, microorganisms and the genes they carry have mainly been moved by physical forces such as air and water currents. These forces generated biogeographic patterns for microorganisms that are similar to those of animals and plants (1). [...]
2017 - 10.1126/science.aao3007
Science, Vol. 357, issue 6356 (Sep. 2017) , p. 1099-1100
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