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1.
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11 p, 2.6 MB |
Knock-Out of CmNAC-NOR Affects Melon Climacteric Fruit Ripening
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Liu, Bin (Centre de Recerca en Agrigenòmica) ;
Santo Domingo, Miguel (Centre de Recerca en Agrigenòmica) ;
Mayobre, Carlos (Centre de Recerca en Agrigenòmica) ;
Martín-Hernández, Ana Montserrat (Centre de Recerca en Agrigenòmica) ;
Pujol Abajo, Marta (Centre de Recerca en Agrigenòmica) ;
Garcia-Mas, Jordi (Centre de Recerca en Agrigenòmica)
Fruit ripening is an important process that affects fruit quality. A QTL in melon, ETHQV6. 3, involved in climacteric ripening regulation, has been found to be encoded by CmNAC-NOR, a homologue of the tomato NOR gene. [...]
2022 -  10.3389/fpls.2022.878037
Frontiers in plant science, Vol. 13 (June 2022) , art. 878037
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2.
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15 p, 4.7 MB |
Pollen tube emergence is mediated by ovary-expressed ALCATRAZ in cucumber
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Cheng, Zhihua (China Agricultural University) ;
Liu, Xiaofeng (China Agricultural University) ;
Yan, Shuangshuang (China Agricultural University) ;
Liu, Bin (Centre de Recerca en Agrigenòmica) ;
Zhong, Yanting (China Agricultural University) ;
Song, Weiyuan (China Agricultural University) ;
Chen, Jiacai (China Agricultural University) ;
Wang, Zhongyi (China Agricultural University) ;
Che, Gen (China Agricultural University) ;
Liu, Liu (China Agricultural University) ;
Ying, Ao (China Agricultural University) ;
Lv, Hanli (China Agricultural University) ;
Han, Lijie (China Agricultural University) ;
Li, Min (China Agricultural University) ;
Zhao, Jianyu (China Agricultural University) ;
Xu, Junqiang (Yunnan Agricultural University) ;
Yang, Zhengan (Yunnan Agricultural University) ;
Zhou, Zhaoyang (China Agricultural University) ;
Zhang, Xiaolan (China Agricultural University)
Pollen tube guidance within female tissues of flowering plants can be divided into preovular guidance, ovular guidance and a connecting stage called pollen tube emergence. As yet, no female factor has been identified to positively regulate this transition process. [...]
2023 - 10.1038/s41467-023-35936-z
Nature communications, Vol. 14 (January 2023) , art. 258
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3.
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26 p, 12.8 MB |
Whole-Genome Resequencing of Worldwide Wild and Domestic Sheep Elucidates Genetic Diversity, Introgression, and Agronomically Important Loci
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Lv, Feng-Hua (China Agricultural University. College of Animal Science and Technology) ;
Cao, Yin-Hong (University of Chinese Academy of Sciences . College of Life Sciences) ;
Liu, Guang-Jian (Novogene Bioinformatics Institute) ;
Luo, Ling-Yun (China Agricultural University. College of Animal Science and Technology) ;
Lu, Ran (China Agricultural University. College of Animal Science and Technology) ;
Liu, Ming-Jun (Xinjiang Academy of Animal Science. Animal Biotechnological Research Center) ;
Li, Wen-Rong (Xinjiang Academy of Animal Science. Animal Biotechnological Research Center) ;
Zhou, Ping (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Wang, Xin-Hua (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Shen, Min (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Gao, Lei (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Yang, Jing-Quan (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Yang, Hua (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Yang, Yong-Lin (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Liu, Chang-Bin (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Wan, Peng-Cheng (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Zhang, Yun-Sheng (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Pi, Wen-Hui (Xinjiang Academy of Agricultural and Reclamation Sciences. State Key Laboratory of Sheep Genetic Improvement and Healthy Production) ;
Ren, Yan-Ling (Shandong Binzhou Academy of Animal Science and Veterinary Medicine) ;
Shen, Zhi-Qiang (Shandong Binzhou Academy of Animal Science and Veterinary Medicine) ;
Wang, Feng (Nanjing Agricultural University. Institute of Sheep and Goat Science) ;
Wang, Yu-Tao (Kashi University. College of Life and Geographic Sciences) ;
Li, Jin-Quan (Inner Mongolia Agricultural University. College of Animal Science) ;
Salehian-Dehkordi, Hosein (University of Chinese Academy of Sciences. College of Life Sciences) ;
Hehua, Eer (Ningxia Academy of Agriculture and Forestry Sciences. Grass-Feeding Livestock Engineering Technology Research Center) ;
Liu, Yong-Gang (Yunnan Agricultural University. College of Animal Science and Technology) ;
Chen, Jian-Fei (China Agricultural University. College of Animal Science and Technology) ;
Wang, Jian-Kui (China Agricultural University. College of Animal Science and Technology) ;
Deng, Xue-Mei (China Agricultural University. College of Animal Science and Technology) ;
Esmailizadeh, Ali (Shahid Bahonar University of Kerman. Department of Animal Science) ;
Dehghani-Qanatqestani, Mostafa (Shahid Bahonar University of Kerman. Department of Animal Science) ;
Charati, Hadi (Shahid Bahonar University of Kerman. Department of Animal Science) ;
Nosrati, Maryam (Payame Noor University. Department of Agriculture) ;
Štěpánek, Ondřej (State Veterinary Institute Jihlava. Department of Virology) ;
Rushdi, Hossam E (Cairo University. Department of Animal Production) ;
Olsaker, Ingrid (Norwegian University of Life Sciences. Department of Preclinical Sciences and Pathology) ;
Curik, Ino (University of Zagreb. Department of Animal Science) ;
Gorkhali, Neena A (Nepal Agriculture Research Council. Animal Breeding Division, National Animal Science Institute) ;
Paiva, Samuel R (Embrapa Recursos Genéticos e Biotecnologia) ;
Caetano, Alexandre R (Embrapa Recursos Genéticos e Biotecnologia) ;
Ciani, Elena (Università degli Studi di Bari. Dipartimento di Bioscienze, Biotecnologie e Biofarmaceutica) ;
Amills i Eras, Marcel (Universitat Autònoma de Barcelona. Departament de Ciència Animal i dels Aliments) ;
Weimann, Christina (Justus-Liebig-University Giessen. Department of Animal Breeding and Genetics) ;
Erhardt, Georg (Justus-Liebig-University Giessen. Department of Animal Breeding and Genetics) ;
Amane, Agraw (International Livestock Research Institute) ;
Mwacharo, Joram M (The Roslin Institute Building) ;
Han, Jian-Lin (International Livestock Research Institute (Nairobi, Kènia)) ;
Hanotte, Olivier (University of Nottingham. School of Life Sciences) ;
Periasamy, Kathiravan (International Atomic Energy Agency. Animal Production and Health Laboratory) ;
Johansson, Anna M (Swedish University of Agricultural Sciences. Department of Animal Breeding and Genetics) ;
Hallsson, Jón H (Agricultural University of Iceland. Faculty of Natural Resources and Environmental Sciences) ;
Kantanen, Juha (Natural Resources Institute Finland. Production Systems) ;
Coltman, David W (University of Alberta. Department of Biological Sciences) ;
Bruford, Michael W (Cardiff University. Sustainable Places Research Institute) ;
Lenstra, Johannes A (Utrecht University. Faculty of Veterinary Medicine) ;
Li, Meng-Hua (China Agricultural University. College of Animal Science and Technology)
Domestic sheep and their wild relatives harbor substantial genetic variants that can form the backbone of molecular breeding, but their genome landscapes remain understudied. Here, we present a comprehensive genome resource for wild ovine species, landraces and improved breeds of domestic sheep, comprising high-coverage (∼16. [...]
2021 - 10.1093/molbev/msab353
Molecular biology and evolution, Vol. 39 (december 2021)
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4.
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21 p, 3.8 MB |
Light Deficiency Inhibits Growth by Affecting Photosynthesis Efficiency as well as JA and Ethylene Signaling in Endangered Plant Magnolia sinostellata
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Lu, Danying (Zhejiang Agriculture and Forestry University. College of Landscape and Architecture) ;
Liu, Bin (Centre de Recerca en Agrigenòmica) ;
Ren, Mingjie (Zhejiang Agriculture and Forestry University. College of Landscape and Architecture) ;
Wu, Chao (Zhejiang Agriculture and Forestry University. College of Landscape and Architecture) ;
Ma, Jingjing (Zhejiang Agriculture and Forestry University. College of Landscape and Architecture) ;
Shen, Yamei (Zhejiang Agriculture and Forestry University. College of Landscape and Architecture)
The endangered plant Magnolia sinostellata largely grows in the understory of forest and suffers light deficiency stress. It is generally recognized that the interaction between plant development and growth environment is intricate; however, the underlying molecular regulatory pathways by which light deficiency induced growth inhibition remain obscure. [...]
2021 - 10.3390/plants10112261
Plants, Vol. 10, Issue 11 (October 2021) , art. 2261
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5.
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10 p, 3.6 MB |
Plant buffering against the high-light stress-induced accumulation of CsGA2ox8 transcripts via alternative splicing to finely tune gibberellin levels and maintain hypocotyl elongation
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Liu, Bin (Centre de Recerca en Agrigenòmica) ;
Zhao, Shuo (Shanghai Jiao Tong University. School of Agriculture and Biology) ;
Li, Pengli (Shanghai Jiao Tong University. School of Agriculture and Biology) ;
Yin, Yilu (Shanghai Jiao Tong University. School of Agriculture and Biology) ;
Niu, Qingliang (Shanghai Jiao Tong University. School of Agriculture and Biology) ;
Yan, Jinqiang (Guangdong Academy of Agricultural Sciences) ;
Huang, Danfeng (Shanghai Jiao Tong University. School of Agriculture and Biology)
In plants, alternative splicing (AS) is markedly induced in response to environmental stresses, but it is unclear why plants generate multiple transcripts under stress conditions. In this study, RNA-seq was performed to identify AS events in cucumber seedlings grown under different light intensities. [...]
2021 - 10.1038/s41438-020-00430-w
Horticulture research, Vol. 8, art. 2 (Jan. 2021)
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6.
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9 p, 1.3 MB |
Selection footprints reflect genomic changes associated with breeding efforts in 56 cucumber inbred lines
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Liu, Bin (China Agricultural University. Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops) ;
Guan, Dailu (Centre de Recerca en Agrigenòmica) ;
Zhai, Xuling (China Agricultural University. Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops) ;
Yang, Sen (China Agricultural University. Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops) ;
Xue, Shudan (China Agricultural University. Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops) ;
Chen, Shuying (China Agricultural University. Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops) ;
Huang, Jing (Purdue University. Department of Agronomy (USA)) ;
Ren, Huazhong (China Agricultural University. Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops) ;
Liu, Xingwang (China Agricultural University. Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops)
Cucumber selective breeding over recent decades has dramatically increased productivity and quality, but the genomic characterizations and changes associated with this breeding history remain unclear. [...]
2019 - 10.1038/s41438-019-0209-4
Horticulture research, Vol. 6 (November 2019) , art. 127
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