Results overview: Found 10 records in 0.02 seconds.
Articles, 10 records found
Articles 10 records found  
1.
39 p, 4.4 MB Population dynamics and genetic connectivity in recent chimpanzee history / Fontsere, Claudia (Institut de Biologia Evolutiva (Barcelona)) ; Kuhlwilm, Martin (University of Vienna. Human Evolution and Archaeological Sciences) ; Morcillo-Suarez, Carlos (Institut de Biologia Evolutiva) ; Alvarez-Estape, Marina (Institut de Biologia Evolutiva) ; Lester, Jack D. (Max Planck Institute for Evolutionary Anthropology) ; Gratton, Paolo (Università di Roma "Tor Vergata". Dipartimento di Biologia) ; Schmidt, Joshua M. (The University of Adelaide. School of Biological Sciences) ; Dieguez, Paula (German Centre for Integrative Biodiversity Research) ; Aebischer, Thierry (University of Fribourg) ; Álvarez-Varona, Paula (Jane Goodall Institute Spain and Senegal) ; Agbor, Anthony (Max Planck Institute for Evolutionary Anthropology) ; Angedakin, Samuel (Max Planck Institute for Evolutionary Anthropology) ; Assumang, Alfred K. (Kwame Nkrumah University of Science and Technology. Department of Wildlife and Range Management) ; Ayimisin, Emmanuel A. (Max Planck Institute for Evolutionary Anthropology) ; Bailey, Emma (Max Planck Institute for Evolutionary Anthropology) ; Barubiyo, Donatienne (Max Planck Institute for Evolutionary Anthropology) ; Bessone, Mattia (Max Planck Institute for Evolutionary Anthropology) ; Carretero-Alonso, Andrea (Fundación Rainfer) ; Chancellor, Rebecca (West Chester University. Depts of Anthropology and Sociology and Psychology) ; Cohen, Heather (Wild Chimpanzee Foundation) ; Danquah, Emmanuel (Kwame Nkrumah University of Science and Technology. Department of Wildlife and Range Management) ; Deschner, Tobias (Max Planck Institute for Evolutionary Anthropology) ; Dunn, Andrew (Wildlife Conservation Society) ; Dupain, Jef (Antwerp Zoo Foundation) ; Egbe, Villard E. (Max Planck Institute for Evolutionary Anthropology) ; Feliu, Olga (Fundació MONA) ; Goedmakers, Annemarie (Chimbo Foundation) ; Granjon, Anne-Céline (Max Planck Institute for Evolutionary Anthropology) ; Head, Josephine (Max Planck Institute for Evolutionary Anthropology) ; Hedwig, Daniela (Cornell University. K. Lisa Yang Center for Conservation) ; Hermans, Veerle (Royal Zoological Society of Antwerp) ; Hernandez-Aguilar, R. Adriana (Universitat de Barcelona. Departament de Psicologia Social i Psicologia Quantitativa) ; Imong, Inaoyom (Wildlife Conservation Society) ; Jones, Sorrel (RSPB Centre of Conservation Science) ; Junker, Jessica (German Centre for Integrative Biodiversity Research) ; Kadam, Parag (Greater Mahale Ecosystem Research and Conservation Project) ; Kaiser, Mike (Max Planck Institute for Evolutionary Anthropology) ; Kambere, Mbangi (Max Planck Institute for Evolutionary Anthropology) ; Kambale, Magloire V. (Max Planck Institute for Evolutionary Anthropology) ; Kalan, Ammie K. (University of Victoria. Department of Anthropology) ; Kienast, Ivonne (Max Planck Institute for Evolutionary Anthropology) ; Kujirakwinja, Deo (Wildlife Conservation Society) ; Langergraber, Kevin (Arizona State University) ; Lapuente, Juan (Max Planck Institute for Evolutionary Anthropology) ; Larson, Bradley (Max Planck Institute for Evolutionary Anthropology) ; Laudisoit, Anne (Evolutionary Ecology group) ; Lee, Kevin (Arizona State University. School of Human Evolution and Social Change) ; Llana, Manuel (Jane Goodall Institute Spain and Senegal) ; Llorente, Miquel (Universitat de Girona. Departament de Psicologia) ; Marrocoli, Sergio (Max Planck Institute for Evolutionary Anthropology) ; Morgan, David (Lester E. Fisher Center for the Study and Conservation of Apes) ; Mulindahabi, Felix (Wildlife Conservation Society) ; Murai, Mizuki (Max Planck Institute for Evolutionary Anthropology) ; Neil, Emily (Max Planck Institute for Evolutionary Anthropology) ; Nicholl, Sonia (Max Planck Institute for Evolutionary Anthropology) ; Nixon, Stuart (Chester Zoo) ; Normand, Emma (Wild Chimpanzee Foundation) ; Orbell, Chris (Panthera) ; Ormsby, Lucy J. (Max Planck Institute for Evolutionary Anthropology) ; Pacheco, Liliana (Centres Molina) ; Piel, Alex (University College London. Department of Anthropology) ; Riera, Laura (Fundació MONA) ; Robbins, Martha M. (Max Planck Institute for Evolutionary Anthropology) ; Rundus, Aaron (West Chester University. Department of Psychology) ; Sanz, Crickette (Wildlife Conservation Society) ; Sciaky, Lilah (Max Planck Institute for Evolutionary Anthropology) ; Sommer, Volker (Primate Project) ; Stewart, Fiona A. (Liverpool John Moores University. School of Biological & Environmental Sciences) ; Tagg, Nikki (Royal Zoological Society of Antwerp) ; Tédonzong, Luc Roscelin (Royal Zoological Society of Antwerp) ; Ton, Els (Chimbo Foundation) ; van Schijndel, Joost (Chimbo Foundation) ; Vergnes, Virginie (Wild Chimpanzee Foundation) ; Wessling, Erin G. (Harvard University. Department of Human Evolutionary Biology) ; Willie, Jacob (Ghent University. Department of Biology) ; Wittig, Roman M. (Taï Chimpanzee Project) ; Yuh, Yisa G. (University of Concordia. Department of Geography, Planning and Environmental Studies) ; Yurkiw, Kyle (Max Planck Institute for Evolutionary Anthropology) ; Zuberbuehler, Klaus (University of St. Andrews. School of Psychology and Neuroscience) ; Hecht, Jochen (Institut de Ciència i Tecnologia de Barcelona) ; Vigilant, Linda (Max Planck Institute for Evolutionary Anthropology) ; Boesch, Christophe (Max Planck Institute for Evolutionary Anthropology) ; Andrés, Aida M. (University College London. Department of Genetics, Evolution and Environment) ; Hughes, David A. (University of Bristol. Bristol Medical School) ; Kühl, Hjalmar S. (German Centre for Integrative Biodiversity Research) ; Lizano, Esther (Institut Català de Paleontologia Miquel Crusafont) ; Arandjelovic, Mimi (German Centre for Integrative Biodiversity Research) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont)
Knowledge on the population history of endangered species is critical for conservation, but whole-genome data on chimpanzees (Pan troglodytes) is geographically sparse. Here, we produced the first non-invasive geolocalized catalog of genomic diversity by capturing chromosome 21 from 828 non-invasive samples collected at 48 sampling sites across Africa. [...]
2022 - 10.1016/j.xgen.2022.100133
Cell Genomics, Vol. 2, Issue 6 (June 2022) , art. 100133  
2.
14 p, 742.5 KB Insights from the rescue and breeding management of Cuvier's gazelle (Gazella cuvieri) through whole-genome sequencing / Alvarez-Estape, Marina (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Fontsere, Claudia (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Serres-Armero, Aitor (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Kuderna, Lukas (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Dobrynin, Pavel (ITMO University. Computer Technologies Laboratory) ; Guidara, Héla (Direction Générale des Forêts (Tunisia)) ; Pukazhenthi, Budhan S. (Smithsonian Conservation Biology Institute) ; Koepfli, Klaus-Peter (Smithsonian Conservation Biology Institute) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont) ; Moreno, Eulalia (Estación Experimental de Zonas Áridas-CSIC. Departamento de Ecología Funcional y Evolutiva) ; Lizano, Esther (Institut Català de Paleontologia Miquel Crusafont)
Captive breeding programmes represent the most intensive type of ex situ population management for threatened species. One example is the Cuvier's gazelle programme that started in 1975 with only four founding individuals, and after more than four decades of management in captivity, a reintroduction effort was undertaken in Tunisia in 2016, to establish a population in an area historically included within its range. [...]
2022 - 10.1111/eva.13336
Evolutionary applications, Vol. 15, Issue 3 (March 2022) , p. 351-364  
3.
6 p, 698.6 KB Genetic data from the extinct giant rat from Tenerife (Canary Islands) points to a recent divergence from mainland relatives / Renom, Pere (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; de Dios, Toni (Institut de Biologia Evolutiva (Barcelona)) ; Civit, Sergi (Universitat de Barcelona. Institut de Recerca de la Biodiversitat (IRBio)) ; Llovera, Laia (Institut de Biologia Evolutiva (Barcelona)) ; Sánchez-Gracia, Alejandro (Universitat de Barcelona. Institut de Recerca de la Biodiversitat (IRBio)) ; Lizano, Esther (Institut Català de Paleontologia Miquel Crusafont) ; Rando, Juan Carlos (Universidad de La Laguna. Departamento de Biología Animal, Edafología y Geología) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont) ; Kergoat, Gael (Université de Montpellier) ; Casanovas i Vilar, Isaac (Institut Català de Paleontologia Miquel Crusafont) ; Lalueza-Fox, Carles (Institut de Biologia Evolutiva (Barcelona))
Evolution of vertebrate endemics in oceanic islands follows a predictable pattern, known as the island rule, according to which gigantism arises in originally small-sized species and dwarfism in large ones. [...]
2021 - 10.1098/rsbl.2021.0533
Biology letters, Vol. 17, Issue 12 (December 2021) , art. 20210533  
4.
19 p, 2.9 MB Salmonella enterica from a soldier from the 1652 siege of Barcelona (Spain) supports historical transatlantic epidemic contacts / de Dios, Toni (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Carrión, Pablo (Institut de Biologia Evolutiva (Barcelona)) ; Olalde, Iñigo (Institut de Biologia Evolutiva (Barcelona)) ; Llovera, Laia (Institut de Biologia Evolutiva (Barcelona)) ; Lizano, Esther (Institut de Biologia Evolutiva (Barcelona)) ; Pàmies, Dídac (Antequem. Arqueologia Patrimoni Cultural) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont) ; Balloux, François (University College London. UCL Genetics Institute) ; van Dorp, Lucy (University College London. UCL Genetics Institute) ; Lalueza-Fox, Carles (Institut de Biologia Evolutiva (Barcelona))
Ancient pathogen genomics is an emerging field allowing reconstruction of past epidemics. The demise of post-contact American populations may, at least in part, have been caused by paratyphoid fever brought by Europeans. [...]
2021 - 10.1016/j.isci.2021.103021
iScience, Vol. 24, Issue 9 (September 2021) , art. 103021  
5.
22 p, 2.0 MB Genomic analysis of 18th-century Kazakh individuals and their oral microbiome / White, Anna E. (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; de Dios, Toni (Institut de Biologia Evolutiva (Barcelona)) ; Carrión, Pablo (Institut de Biologia Evolutiva (Barcelona)) ; Bonora, Gian Luca (International Association for Mediterranean and East Studies - ISMEO) ; Llovera, Laia (Institut de Biologia Evolutiva (Barcelona)) ; Cilli, Elisabetta (University of Bologna. Department of Cultural Heritage) ; Lizano, Esther (Institut Català de Paleontologia Miquel Crusafont) ; Khabdulina, Maral K. (L.N. Gumilev Eurasian National University. K.A. Akishev Institute of Archaeology) ; Tleugabulov, Daniyar T. (L.N. Gumilev Eurasian National University. K.A. Akishev Institute of Archaeology) ; Olalde, Iñigo (Institut de Biologia Evolutiva (Barcelona)) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont) ; Balloux, François (University College London. UCL Genetics Institute. Department of Genetics Evolution & Environment) ; Pettener, Davide (University of Bologna. Department of Biological, Geological and Environmental Sciences) ; van Dorp, Lucy (University College London. UCL Genetics Institute. Department of Genetics Evolution & Environment) ; Luiselli, Donata (University of Bologna. Department of Cultural Heritage) ; Lalueza-Fox, Carles (Institut de Biologia Evolutiva (Barcelona))
The Asian Central Steppe, consisting of current-day Kazakhstan and Russia, has acted as a highway for major migrations throughout history. Therefore, describing the genetic composition of past populations in Central Asia holds value to understanding human mobility in this pivotal region. [...]
2021 - 10.3390/biology10121324
Biology, Vol. 10, Issue 12 (December 2021) , art. 1324  
6.
32 p, 2.0 MB Comprehensive identification of somatic nucleotide variants in human brain tissue / Wang, Yifan (University of Michigan Medical School. Department of Computational Medicine and Bioinformatics) ; Bae, Taejeong (Mayo Clinic. Center for Individualized Medicine. Department of Health Sciences Research) ; Thorpe, Jeremy (Johns Hopkins School of Medicine. Program in Biochemistry, Cellular and Molecular Biology) ; Sherman, Maxwell A. (Harvard Medical School) ; Jones, Attila G. (Icahn School of Medicine at Mount Sinai. Department of Genetics and Genomic Sciences) ; Cho, Sean (Kennedy Krieger Institute. Department of Neurology) ; Daily, Kenneth (Sage Bionetworks (Seattle, Estats Units)) ; Dou, Yanmei (Harvard Medical School. Department of Biomedical Informatics) ; Ganz, Javier (Harvard Medical School. Departments of Neurology and Pediatrics) ; Galor, Alon (Harvard Medical School. Department of Biomedical Informatics) ; Lobon, Irene (Universitat de Barcelona. Departament de Biologia Cel·lular, Fisiologia i Immunologia) ; Pattni, Reenal (Stanford University School of Medicine. Department of Genetics) ; Rosenbluh, Chaggai (Icahn School of Medicine at Mount Sinai. Department of Cell, Developmental and Regenerative Biology) ; Tomasi, Simone (Yale University. Child Study Center) ; Tomasini, Livia (Yale University. Child Study Center) ; Yang, Xiaoxu (Rady Children's Institute for Genomic Medicine) ; Zhou, Bo (Stanford University School of Medicine. Department of Genetics) ; Akbarian, Schahram (Icahn School of Medicine at Mount Sinai. Department of Psychiatry) ; Ball, Laurel L. (Rady Children's Institute for Genomic Medicine) ; Bizzotto, Sara (Broad Institute of MIT and Harvard) ; Emery, Sarah B. (University of Michigan Medical School. Department of Human Genetics) ; Doan, Ryan (Broad Institute of MIT and Harvard) ; Fasching, Liana (Yale University. Child Study Center) ; Jang, Yeongjun (Mayo Clinic. Center for Individualized Medicine. Department of Health Sciences Research) ; Juan, David (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Lizano, Esther (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Luquette, Lovelace J. (Harvard Medical School. Department of Biomedical Informatics) ; Moldovan, John B. (University of Michigan Medical School. Department of Human Genetics) ; Narurkar, Rujuta (Lieber Institute for Brain Development) ; Oetjens, Matthew T. (University of Michigan Medical School. Department of Human Genetics) ; Rodin, Rachel E. (Broad Institute of MIT and Harvard) ; Sekar, Shobana (Mayo Clinic. Center for Individualized Medicine. Department of Health Sciences Research) ; Shin, Joo Heon (Johns Hopkins School of Medicine. Department of Neurology) ; Soriano García, Eduardo (Universitat de Barcelona. Departament de Biologia Cel·lular, Fisiologia i Immunologia) ; Straub, Richard E. (Lieber Institute for Brain Development) ; Zhou, Weichen (University of Michigan Medical School. Department of Computational Medicine and Bioinformatics) ; Chess, Andrew (Icahn School of Medicine at Mount Sinai. Department of Genetics and Genomic Sciences) ; Gleeson, Joseph G. (Rady Children's Institute for Genomic Medicine) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont) ; Park, Peter J. (Harvard Medical School. Department of Biomedical Informatics) ; Peters, Mette A. (Sage Bionetworks) ; Pevsner, Jonathan (Johns Hopkins School of Medicine. Department of Psychiatry and Behavioral Sciences) ; Walsh, Christopher A. (Broad Institute of MIT and Harvard) ; Weinberger, Daniel R. (Johns Hopkins School of Medicine. Department of Neuroscience) ; Vaccarino, Flora M. (Yale University. Department of Neuroscience) ; Moran, John V. (University of Michigan Medical School. Department of Internal Medicine) ; Urban, Alexander E. (Stanford University School of Medicine. Department of Psychiatry and Behavioral Sciences) ; Kidd, Jeffrey M. (University of Michigan Medical School. Department of Computational Medicine and Bioinformatics) ; Mills, Ryan E. (University of Michigan Medical School. Department of Computational Medicine and Bioinformatics) ; Abyzov, Alexej (Mayo Clinic. Center for Individualized Medicine. Department of Health Sciences Research) ; Brain Somatic Mosaicism Network
Post-zygotic mutations incurred during DNA replication, DNA repair, and other cellular processes lead to somatic mosaicism. Somatic mosaicism is an established cause of various diseases, including cancers. [...]
2021 - 10.1186/s13059-021-02285-3
Genome biology, Vol. 22 (march 2021)  
7.
12 p, 2.8 MB The genomics of ecological flexibility, large brains,and long lives in capuchin monkeys revealedwith fecalFACS / Orkin, Joseph (University of Calgary. Department of Anthropology and Archaeology) ; Montague, Michael (University of Pennsylvania. Department of Neuroscience) ; Tejada-Martinez, Daniela (Thomas Jefferson University. Department of Biochemistry and Molecular Biology) ; de Manuel, Marc (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; del Campo, Javier (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Cheves Hernandez, Saul (Área de Concervación Guanacaste) ; Di Fiore, Anthony (University of Texas at Austin. Department of Anthropology and Primate Molecular Ecology and Evolution Laboratory) ; Fontsere, Claudia (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Hodgson, Jason A. (Pennsylvania State University. Department of Anthropology) ; Janiak, Mareike (University of Calgary. Department of Anthropology and Archaeology) ; Kuderna, Lukas (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Lizano, Esther (Institut Català de Paleontologia Miquel Crusafont) ; Martino, Maria Pia (Kids Saving the Rainforest Wildlife Rescue Center) ; Niimura, Yoshihito (The University of Tokyo. Department of Applied Biological Chemistry) ; Perry, George (Pennsylvania State University. Department of Anthropology) ; Soto Valverde, Carmen (Kids Saving the Rainforest Wildlife Rescue Center) ; Tanga, Jia (University of Calgary. Department of Anthropology and Archaeology) ; Warren, Wesley (University of Missouri. Division of Animal Sciences, School of Medicine) ; de Magalhaes, Joao Pedro (University of Liverpool. Institute of Ageing and Chronic Disease) ; Kawamura, Shoji (The University of Tokyo. Department of Integrated Biosciences) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont) ; Krawetz, Roman (University of Calgary. Department of Cell Biology and Anatomy) ; Melin, Amanda D. (University of Calgary. Department of Anthropology and Archaeology)
Ecological flexibility, extended lifespans, and large brains have long intrigued evolutionary biologists, and comparative genomics offers an efficient and effective tool for generating new insights into the evolution of such traits. [...]
2021 - 10.1073/pnas.2010632118
Proceedings of the National Academy of Sciences of the United States of America, Vol. 118, Issue 7 (February 2021) , e2010632118  
8.
21 p, 2.4 MB Differential DNA methylation of vocal and facial anatomy genes in modern humans / Gokhman, David (The Hebrew University of Jerusalem. The Alexander Silberman Institute of Life Sciences. Department of Genetics (Israel)) ; Nissim-Rafinia, Malka (The Hebrew University of Jerusalem. The Alexander Silberman Institute of Life Sciences. Department of Genetics (Israel)) ; Agranat-Tamir, Lily (The Hebrew University of Jerusalem. Department of Statistics (Israel)) ; Housman, Genevieve (Arizona State University. Center for Evolution and Medicine (USA)) ; García Perez, Raquel (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Lizano, Esther (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Cheronet, Olivia (University of Vienna. Department of Evolutionary Anthropology (Austria)) ; Mallick, Swapan (Howard Hughes Medical Institute. Harvard Medical School (USA)) ; Nieves-Colón, Maria A. (Arizona State University. Center for Evolution and Medicine (USA)) ; Li, Heng (Broad Institute of MIT and Harvard) ; Alpaslan-Roodenberg, Songül (Harvard Medical School. Department of Genetics (USA)) ; Novak, Mario (University College Dublin. Earth Institute and School of Archaeology (Ireland)) ; Gu, Hongcang (Broad Institute of MIT and Harvard) ; Osinski, Jason M. (University at Buffalo. Jacobs School of Medicine and Biomedical Sciences. Department of Biochemistry (USA)) ; Ferrando-Bernal, Manuel (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Gelabert, Pere (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Lipende, Iddi (Jane Goodall Institute. Gombe Stream Research Center (Tanzania)) ; Mjungu, Deus (Jane Goodall Institute. Gombe Stream Research Center (Tanzania)) ; Kondova, Ivanela (Biomedical Primate Research Centre (Netherlands)) ; Bontrop, Ronald (Biomedical Primate Research Centre (Netherlands)) ; Kullmer, Ottmar (Senckenberg Center of Human Evolution and Paleoecology. Department of Palaeoanthropology and Messel Research (Germany)) ; Weber, Gerhard (University of Vienna. Department of Evolutionary Anthropology (Austria)) ; Shahar, Tal (Shaare Zedek Medical Center. Department of Neurosurgery (Israel)) ; Dvir-Ginzberg, Mona (Hebrew University of Jerusalem. Institute of Dental Sciences. Laboratory of Cartilage Biology (Israel)) ; Faerman, Marina (Hebrew University of Jerusalem. Institute of Dental Sciences. Laboratory of Bioanthropology and Ancient DNA (Israel)) ; Quillen, Ellen E. (Texas Biomedical Research Institute. Department of Genetics (USA)) ; Meissner, Alexander (Harvard University. Department of Stem Cell and Regenerative Biology (USA)) ; Lahav, Yonatan (The Hebrew University Medical School (Israel)) ; Kandel, Leonid (Hadassah - Hebrew University Medical Center. Orthopaedic Department (Israel)) ; Liebergall, Meir (Hadassah - Hebrew University Medical Center. Orthopaedic Department (Israel)) ; Prada, María E. (I.E.S.O. 'Los Salados'. Junta de Castilla y León) ; Vidal, Julio M. (Junta de Castilla y León. Servicio de Cultura de León) ; Gronostajski, Richard M. (University at Buffalo. Jacobs School of Medicine and Biomedical Sciences. Department of Biochemistry (USA)) ; Stone, Anne C. (Arizona State University. Institute of Human Origins) ; Yakir, Benjamin (The Hebrew University of Jerusalem. Department of Statistics (Israel)) ; Lalueza-Fox, Carles (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Pinhasi, Ron (University of Vienna. Department of Evolutionary Anthropology (Austria)) ; Reich, David (Howard Hughes Medical Institute. Harvard Medical School (USA)) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont) ; Meshorer, Eran (The Hebrew University of Jerusalem. The Edmond and Lily Safra Center for Brain Sciences (Israel)) ; Carmel, Liran (The Hebrew University of Jerusalem. The Alexander Silberman Institute of Life Sciences. Department of Genetics (Israel))
Changes in potential regulatory elements are thought to be key drivers of phenotypic divergence. However, identifying changes to regulatory elements that underlie human-specific traits has proven very challenging. [...]
2020 - 10.1038/s41467-020-15020-6
Nature communications, Vol. 11 (March 2020) , art. 1189  
9.
6 p, 757.8 KB Flow sorting enrichment and nanopore sequencing of chromosome 1 from a Chinese individual / Kuderna, Lukas F. K. (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Solís Moruno, Manuel (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ; Batlle Masó, Laura (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ; Julià, Eva (Institut Hospital del Mar d'Investigacions Mèdiques) ; Lizano, Esther (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Anglada, Roger (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ; Ramírez, Erika (Centre de Regulació Genòmica) ; Bote, Alex (Centre de Regulació Genòmica) ; Tormo, Marc (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ; Marques-Bonet, Tomas (Institut Català de Paleontologia Miquel Crusafont) ; Fornas, Òscar (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ; Casals, Ferran (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut)
Sorting of individual chromosomes by Flow Cytometry (flow-sorting) is an enrichment method to potentially simplify genome assembly by isolating chromosomes from the context of the genome. We have recently developed a workflow to sequence native, unamplified DNA and applied it to the smallest human chromosome, the Y chromosome. [...]
2020 - 10.3389/fgene.2019.01315
Frontiers in genetics, Vol. 10 (January 2020) , art. 1315  
10.
8 p, 1.1 MB Selective single molecule sequencing and assembly of a human Y chromosome of African origin / Kuderna, Lukas (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Lizano, Esther (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Julià, Eva (Institut Hospital del Mar d'Investigacions Mèdiques) ; Gómez-Garrido, Jessica (Centre de Regulació Genòmica) ; Serres-Armero, Aitor (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Kuhlwilm, Martin (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Antoni Alandes, Regina (Centre de Regulació Genòmica) ; Alvarez-Estape, Marina (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; David Juan (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ; Heath, Simon (Centre de Regulació Genòmica) ; Alioto, Tyler (Centre de Regulació Genòmica) ; Gut, Marta (Centre de Regulació Genòmica) ; Gut, Ivo (Centre de Regulació Genòmica) ; Heide Schierup, Mikkel (Aarhus University. Bioinformatics Research Center) ; Fornas, Oscar (Centre de Regulació Genòmica) ; Marques-Bonet, Tomas, 1975- (Institut Català de Paleontologia Miquel Crusafont)
Mammalian Y chromosomes are often neglected from genomic analysis. Due to their inherent assembly difficulties, high repeat content, and large ampliconic regions, only a handful of species have their Y chromosome properly characterized. [...]
2019 - 10.1038/s41467-018-07885-5
Nature communications, Vol. 10 (January 2019) , art. 4  

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