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16 p, 12.8 MB |
The building stone of the Roman city of Lixus (NW Morocco) : provenance, petrography and petrophysical characterization
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Ajanaf, T. (Université Abdelmalek Essaadi Maroc. Département de Géologie) ;
Gómez-Gras, David (Universitat Autònoma de Barcelona. Departament de Geologia) ;
Navarro Ezquerra, Antonia (Universitat Politècnica de Catalunya. Departament de Tecnología de la Arquitectura) ;
Martín Martín, Juan Diego (Universitat de Barcelona. Departament de Geoquímica, Petrologia i Prospecció Geològica) ;
Rosell Amigó, J.R. (Universitat Politècnica de Catalunya. Departament de Tecnología de la Arquitectura) ;
Maate, A. (Université Abdelmalek Essaadi Maroc. Département de Géologie)
Characterization of building material is a key tool to assess deterioration processes and improve potential restoration works of archaeological sites. The aim of this paper is to identify and characterize the building stone used in the construction of the Phoenician-Roman city of Lixus (Larache, Morocco) by means of petrographic and petrophysical technics. [...]
2020 -  10.1344/GeologicaActa2020.18.13
Geologica acta, Vol. 18 (2020) (Articles)
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35 p, 2.6 MB |
Copy number variants and fixed duplications among 198 rhesus macaques (Macaca mulatta)
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Brasó-Vives, Marina (Laboratoire de Biométrie et Biologie Évolutive UMR 5558, Université de Lyon, Université Lyon 1, CNRS, Villeurbanne, France) ;
Povolotskaya, Inna S. (Veltischev Research and Clinical Institute for Pediatrics of the Pirogov Russian National Research Medical University, Moscow, Russia) ;
Hartasánchez, Diego A. (Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Parc de Recerca Biomèdica de Barcelona, Barcelona, Catalonia, Spain) ;
Farré, Xavier (Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Parc de Recerca Biomèdica de Barcelona, Barcelona, Catalonia, Spain) ;
Fernández Callejo, Marcos (National Centre for Genomic Analysis-Centre for Genomic Regulation, Barcelona Institute of Science and Technology, Barcelona, Catalonia, Spain) ;
Raveendran, Muthuswamy (Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America) ;
Harris, R. Alan (Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America) ;
Rosene, Douglas L. (Department of Anatomy and Neurobiology, Boston University School of Medicine, Boston, Massachusetts, United States of America) ;
Lorente-Galdos, Belen (Department of Neuroscience, Yale School of Medicine, New Haven, Connecticut, United States of America) ;
Navarro, A, 1969- (Institució Catalana de Recerca i Estudis Avançats, Barcelona, Catalonia, Spain) ;
Marques-Bonet, Tomas, 1975- (Institut Català de Paleontologia Miquel Crusafont) ;
Rogers, Jeffrey (Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America) ;
Juan, David (Institut de Biologia Evolutiva (CSIC-Universitat Pompeu Fabra), Parc de Recerca Biomèdica de Barcelona, Barcelona, Catalonia, Spain)
The rhesus macaque is an abundant species of Old World monkeys and a valuable model organism for biomedical research due to its close phylogenetic relationship to humans. Copy number variation is one of the main sources of genomic diversity within and between species and a widely recognized cause of inter-individual differences in disease risk. [...]
2020 - 10.1371/journal.pgen.1008742
PLoS Genetics, Vol. 16 (may 2020)
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8 p, 990.0 KB |
The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild
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Prado Martinez, Javier (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Hernando Herraez, Irene (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Lorente Galdos, Belén (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Dabad, Marc (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Ramirez, Òscar (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Baeza Delgado, Carlos (Universitat de València. Departament de Bioquímica i Biologia Molecular) ;
Morcillo Suarez, Carlos (Universitat Pompeu Fabra. Instituto Nacional de Bioinformatica) ;
Alkan, Can (Bilkent University. Department of Computer Engineering) ;
Hormozdiari, Fereydoun. (University of Washington. Department of Genome Sciences) ;
Raineri, Emanuele (Centre Nacional d'Anàlisi Genòmica) ;
Estellé, Jordi (Centre Nacional d'Anàlisi Genòmica) ;
Fernandez Callejo, Marcos (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Valles, Mònica (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Ritscher, Lars (University of Leipzig. Institute of Biochemistry) ;
Schöneberg, Torsten (University of Leipzig. Institute of Biochemistry) ;
De la Calle-Mustienes, Elisa (Centro Andaluz de Biología del Desarrollo) ;
Casillas Viladerrams, Sònia (Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasi") ;
Rubio Acero, Raquel (Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasi") ;
Melé, M. (Centre for Genomic Regulation and UPF) ;
Engelken, Johannes (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Cáceres Aguilar, Mario (Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ;
Gomez-Skarmeta, José Luis (Centro Andaluz de Biología del Desarrollo) ;
Gut, Marta (Centre Nacional d'Anàlisi Genòmica) ;
Bertranpetit, Jaume (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Gut, Ivo G. (Centre Nacional d'Anàlisi Genòmica) ;
Abello, Teresa (Parc Zoològic de Barcelona) ;
Eichler, Evan E. (Howard Hugues Medical Institute) ;
Mingarro, Ismael (Universitat de València. Departament de Bioquímica i Biologia Molecular) ;
Lalueza-Fox, Carles (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Navarro, A (Institució Catalana de Recerca i Estudis Avançats) ;
Marques-Bonet, Tomas (Institució Catalana de Recerca i Estudis Avançats)
Background: the only known albino gorilla, named Snowflake, was a male wild born individual from Equatorial Guinea who lived at the Barcelona Zoo for almost 40 years. He was diagnosed with non-syndromic oculocutaneous albinism, i. [...]
2013 - 10.1186/1471-2164-14-363
BMC genomics, Vol. 14 (2013) , art. 363
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5 p, 788.2 KB |
Great ape genetic diversity and population history
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Prado-Martinez, J. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Sudmant, P.H. (Department of Genome Sciences. University of Washington) ;
Kidd, J.M. (Department of Genetics. Stanford University) ;
Li, H. (Department of Genetics. Harvard Medical School, Boston) ;
Kelley, J.L. (Department of Genetics. Stanford University) ;
Lorente-Galdos, B. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Veeramah, K.R. (Arizona Research Laboratories. Division of Biotechnology. University of Arizona) ;
Woerner, A.E. (Arizona Research Laboratories. Division of Biotechnology. University of Arizona) ;
O'Connor, T.D. (Department of Genome Sciences. University of Washington) ;
Santpere, G. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Cagan, A. (Department of Evolutionary Genetics. Max Planck Institute for Evolutionary Anthropology) ;
Theunert, C. (Department of Evolutionary Genetics. Max Planck Institute for Evolutionary Anthropology) ;
Casals, F. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Laayouni, H. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Munch, K. (Bioinformatics Research Centre. Aarhus University) ;
Hobolth, A. (Bioinformatics Research Centre. Aarhus University) ;
Halager, A.E. (Bioinformatics Research Centre. Aarhus University) ;
Malig, M. (Department of Genome Sciences. University of Washington) ;
Hernández Rodríguez, José (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Hernando-Herraez, I. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Prüfer, K. (Department of Evolutionary Genetics. Max Planck Institute for Evolutionary Anthropology) ;
Pybus, M. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Johnstone, L. (Arizona Research Laboratories. Division of Biotechnology. University of Arizona) ;
Lachmann, M. (Department of Evolutionary Genetics. Max Planck Institute for Evolutionary Anthropology) ;
Alkan, C. (Bilkent University. Faculty of Engineering) ;
Twigg, D. (Department of Human Genetics. University of Michigan) ;
Petit, N. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Baker, C. (Department of Genome Sciences. University of Washington) ;
Hormozdiari, F. (Department of Genome Sciences. University of Washington) ;
Fernandez-Callejo, M. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Dabad, M. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Wilson, M.L. (Department of Anthropology. University of Minnesota) ;
Stevison, L. (Institute for Human Genetics. University of California San Francisco) ;
Camprubí Sánchez, Cristina (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, Fisiologia i Immunologia) ;
Carvalho, T. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Ruiz-Herrera Moreno, Aurora (Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ;
Vives, L. (Department of Genome Sciences. University of Washington) ;
Mele, M. (Centre for Genomic Regulation (CRG)) ;
Abello, Teresa. (Parc Zoològic de Barcelona) ;
Kondova, I. (Biomedical Primate Research Centre) ;
Bontrop, R.E. (Biomedical Primate Research Centre) ;
Pusey, A. (Department of Evolutionary Anthropology. Duke University) ;
Lankester, F. (Paul G. Allen School for Global Animal Health. Washington State University) ;
Kiyang, J.A. (Limbe Wildlife Centre) ;
Bergl, R.A. (North Carolina Zoological Park) ;
Lonsdorf, E. (Department of Psychology. Franklin and Marshall College) ;
Myers, S. (Department of Statistics. Oxford University) ;
Ventura, M. (Department of Genetics and Microbiology. University of Bari) ;
Gagneux, P. (Department of Cellular and Molecular Medicine. University of California San Diego) ;
Comas, D. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Siegismund, H. (Department of Biology, Bioinformatics. University of Copenhagen) ;
Blanc, J. (Centro Nacional de Análisis Genómico (CNAG). PCB) ;
Agueda-Calpena, L. (Centro Nacional de Análisis Genómico (CNAG). PCB) ;
Gut, M. (Centro Nacional de Análisis Genómico (CNAG). PCB) ;
Fulton, L. (Genome Sequencing Center. Washington University School of Medicine) ;
Tishkoff, S.A. (Department of Biology and Genetics. University of Pennsylvania) ;
Mullikin, J.C. (National Institutes of Health Intramural Sequencing Center (NISC)) ;
Wilson, R.K. (Genome Sequencing Center. Washington University School of Medicine) ;
Gut, I.G. (Centro Nacional de Análisis Genómico (CNAG). PCB) ;
Gonder, M.K. (Biological Sciences. University at Albany. State University of New York) ;
Ryder, O.A. (Genetics Division. San Diego Zoo's Institute for Conservation Research) ;
Hahn, B.H. (Departments of Medicine and Microbiology. Perelman School of Medicine. University of Pennsylvania) ;
Navarro, A. (Institució Catalana de Recerca i Estudis Avançats (ICREA)) ;
Akey, J.M. (Department of Genome Sciences. University of Washington) ;
Bertranpetit, J. (Institut de Biologia Evolutiva. CSIC-Universitat Pompeu Fabra. PRBB) ;
Reich, D. (Department of Genetics. Harvard Medical School, Boston) ;
Mailund, T. (Bioinformatics Research Centre. Aarhus University) ;
Schierup, M.H. (Department of Bioscience. Aarhus University) ;
Hvilsom, C. (Copenhagen Zoo) ;
Andrés, A.M. (Department of Evolutionary Genetics. Max Planck Institute for Evolutionary Anthropology) ;
Wall, J.D. (Institute for Human Genetics. University of California San Francisco) ;
Bustamante, C.D. (Department of Genetics. Stanford University) ;
Hammer, M.F. (Arizona Research Laboratories. Division of Biotechnology. University of Arizona) ;
Eichler, E.E. (Howard Hughes Medical Institute) ;
Marques-Bonet, Tomas. (Institució Catalana de Recerca i Estudis Avançats (ICREA))
Most great ape genetic variation remains uncharacterized; however, its study is critical for understanding population history, recombination, selection and susceptibility to disease. Here we sequence to high coverage a total of 79 wild- and captive-born individuals representing all six great ape species and seven subspecies and report 88. [...]
2013 - 10.1038/nature12228
Nature, Vol. 499, issue 7459 (July 2013) , p. 471-475
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7 p, 1.7 MB |
On the interpretation of the atmospheric mechanism transporting the environmental trigger of Kawasaki disease
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Ballester, Joan (ISGlobal (Barcelona)) ;
Borràs Aguadé, Sílvia (ISGlobal (Barcelona)) ;
Curcoll Masanes, Roger (Universitat Autònoma de Barcelona. Institut de Ciència i Tecnologia Ambientals) ;
Navarro Gallinad, Albert (ISGlobal (Barcelona)) ;
Pozdniakova, Sofya (ISGlobal (Barcelona)) ;
Cañas, Lidia (ISGlobal (Barcelona)) ;
Burns, Jane C. (University of California San Diego. Kawasaki Disease Research Center) ;
Rodó, Xavier (Institució Catalana de Recerca i Estudis Avançats)
Recent advances on the environmental determinants of Kawasaki Disease have pointed to the important role of the atmospheric transport of a still unknown agent potentially triggering the disease. The hypothesis arose from an innovative methodology combining expertise in climate dynamics, the analysis of ocean and atmosphere data, the use of dispersion models and the search for biological agents in air samples. [...]
2019 - 10.1371/journal.pone.0226402
PloS one, Vol. 14 issue 12 (Dec. 2019) , e0226402
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19 p, 6.6 MB |
Evolutionary history, genomic adaptation to toxic diet, and extinction of the Carolina Parakeet
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Gelabert, Pere (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Sandoval Velasco, Marcela (University of Copenhagen. The GLOBE Institute) ;
Serres, Aitor (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
de Manuel, Marc (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Renom, Pere (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Margaryan, Ashot (University of Copenhagen. The GLOBE Institute) ;
Stiller, Josefin (University of Copenhagen. Department of Biology) ;
de Dios, Toni (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Fang, Qi (BGI-Shenzhen (China)) ;
Feng, Shaohong (BGI-Shenzhen (China)) ;
Mañosa, Santi (Universitat de Barcelona. Institut de Recerca de la Biodiversitat. Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals) ;
Pacheco, George (University of Copenhagen. The GLOBE Institute) ;
Ferrando Bernal, Manuel (Universitat Pompeu Fabra. Institut de Biologia Evolutiva) ;
Shi, Guolin (Northwestern Polytechnical University. Center of Special Environmental Biomechanics & Biomedical Engineering) ;
Hao, Fei (Northwestern Polytechnical University. Center of Special Environmental Biomechanics & Biomedical Engineering) ;
Chen, Xianqing (Northwestern Polytechnical University. Center for Ecological and Environmental Sciences) ;
Petersen, Bent (AIMST University. Centre of Excellence for Omics-Driven Computational Biodiscovery (Malaysia)) ;
Olsen, Remi-André (Stockholm University. Department of Biochemistry and Biophysics) ;
Navarro, A (Institució Catalana de Recerca i Estudis Avançats) ;
Deng, Yuan (BGI-Shenzhen (China)) ;
Dalén, Love (Swedish Museum of Natural History. Department of Bioinformatics and Genetics) ;
Marques-Bonet, Tomas, 1975- (Institut Català de Paleontologia Miquel Crusafont) ;
Zhang, Guojie (Chinese Academy of Sciences. Center for Excellence in Animal Evolution and Genetics) ;
Antunes, Agostinho (University of Porto. Department of Biology) ;
Gilbert, M.Thomas P. (NTNU University Museum (Norway)) ;
Lalueza-Fox, Carles (Universitat Pompeu Fabra. Institut de Biologia Evolutiva)
As the only endemic neotropical parrot to have recently lived in the northern hemisphere, the Carolina parakeet (Conuropsis carolinensis) was an iconic North American bird. The last surviving specimen died in the Cincinnati Zoo in 1918 [1]. [...]
2020 - 10.1016/j.cub.2019.10.066
Current biology, Vol. 30, Issue 1 (January 2020) , p. 108-114
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