Resultats globals: 21 registres trobats en 0.01 segons.
Articles, 18 registres trobats
Documents de recerca, 3 registres trobats
Articles 18 registres trobats  1 - 10següent  anar al registre:
1.
17 p, 867.3 KB Identification of protein-damaging mutations in 10 swine taste receptors and 191 appetite-reward genes / Clop, Alex (Centre de Recerca en Agrigenòmica) ; Sharaf, Abdoallah (Ain Shams University. Faculty of agriculture) ; Castelló, Anna (Centre de Recerca en Agrigenòmica) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica) ; Cirera, Susanna (University of Copenhagen. Department of Veterinary and Animal Sciences) ; Mercadé Carceller, Anna (Centre de Recerca en Agrigenòmica) ; Derdak, Sophia (Universitat Pompeu Fabra) ; Beltran i Agulló, Sergi (Universitat Pompeu Fabra) ; Huisman, Abe (Hypor BV (The Netherlands)) ; Fredholm, Merete (University of Copenhagen. Department of Veterinary and Animal Sciences) ; van As, Pieter (Hendrix Genetics Research & Technology Centre) ; Sánchez Bonastre, Armando (Universitat Autònoma de Barcelona. Departament de Ciència Animal i dels Aliments)
Taste receptors (TASRs) are essential for the body's recognition of chemical compounds. In the tongue, TASRs sense the sweet and umami and the toxin-related bitter taste thus promoting a particular eating behaviour. [...]
2016 - 10.1186/s12864-016-2972-z
BMC genomics, Vol. 17 (August 2016) , art. 685  
2.
27 p, 1.9 MB Polygenic adaptation of rosette growth in Arabidopsis thaliana / Wieters, Benedict (University of Cologne. Institute of Botany (Germany)) ; Steige, Kim A. (University of Cologne. Institute of Botany (Germany)) ; He, Fei (University of Cologne. Institute of Botany (Germany)) ; Koch, Evan M. (Harvard Medical School. Department of Biomedical Informatics (USA)) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica) ; Gu, Hongya (Peking University. State Key Laboratory for Protein and Plant Gene Research (China)) ; Guo, Ya-Long (Chinese Academy of Sciences. Institute of Botany. State Key Laboratory of Systematic and Evolutionary Botany (China)) ; Sunyaev, Shamil (Harvard Medical School. Department of Biomedical Informatics (USA)) ; de Meaux, Juliette (University of Cologne. Institute of Botany (Germany))
The rate at which plants grow is a major functional trait in plant ecology. However, little is known about its evolution in natural populations. Here, we investigate evolutionary and environmental factors shaping variation in the growth rate of Arabidopsis thaliana. [...]
2021 - 10.1371/journal.pgen.1008748
PLoS Genetics, Vol. 17, Issue 1 (January 2021) , art. e1008748  
3.
19 p, 2.2 MB Genomic Diversity and Evolution of Quasispecies in Newcastle Disease Virus Infections / Jadhav, Archana (The Pirbright Institute. Viral Oncogenesis Group) ; Zhao, Lele (University of Oxford. Nuffield Department of Medicine) ; Liu, Weiwei (Chinese Academy of Agricultural Science. Department of Avian Infectious Diseases) ; Ding, Chan (Chinese Academy of Agricultural Science. Department of Avian Infectious Diseases) ; Nair, Venugopal (The Pirbright Institute. Viral Oncogenesis Group) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica) ; Ferretti, Luca (University of Oxford. Nuffield Department of Medicine)
Newcastle disease virus (NDV) infections are well known to harbour quasispecies, due to the error-prone nature of the RNA polymerase. Quasispecies variants in the fusion cleavage site of the virus are known to significantly change its virulence. [...]
2020 - 10.3390/v12111305
Viruses, Vol. 12, Núm. 11 (November 2020) , art. 1305  
4.
11 p, 1.4 MB Whole-genome sequencing reveals insights into the adaptation of French Charolais cattle to Cuban tropical conditions / Ramírez-Ayala, Lino César (Centre de Recerca en Agrigenòmica) ; Rocha, Dominique (Institut national de la recherche agronomique. Génétique Animale et Biologie Intégrative) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica) ; Leno Colorado, Jordi (Centre de Recerca en Agrigenòmica) ; Charles, Mathieu (Institut national de la recherche agronomique. Génétique Animale et Biologie Intégrative) ; Bouchez, Olivier (Institut National de la Recherche Agronomique (França)) ; Rodríguez Valera, Yoel (Universidad de Granma. Facultad de Ciencias Agropecuarias) ; Perez-Enciso, Miguel (Centre de Recerca en Agrigenòmica) ; Ramayo-Caldas, Yuliaxis (Institut de Recerca i Tecnologia Agroalimentàries)
In the early 20th century, Cuban farmers imported Charolais cattle (CHFR) directly from France. These animals are now known as Chacuba (CHCU) and have become adapted to the rough environmental tropical conditions in Cuba. [...]
2021 - 10.1186/s12711-020-00597-9
Genetics, selection, evolution, Vol. 53 (2021)  
5.
16 p, 4.5 MB The identification of runs of homozygosity give a focus on the genetic diversity and the adaptation of the "Charolais de Cuba" cattle / Rodríguez Valera, Yoel (Universidad de Granma. Facultad de Ciencias Agropecuarias) ; Rocha, Dominique (Institut national de la recherche agronomique. Génétique Animale et Biologie Intégrative) ; Naves, Michel (Institut National de la Recherche Agronomique (França)) ; Renand, Gilles (Institut national de la recherche agronomique. Génétique Animale et Biologie Intégrative) ; Pérez-Pineda, Eliecer (Universidad de Granma. Facultad de Ciencias Agropecuarias) ; Ramayo-Caldas, Yuliaxis (Institut de Recerca i Tecnologia Agroalimentàries) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica)
Inbreeding and effective population size (Ne) are fundamental indicators for the management and conservation of genetic diversity in populations. Genomic inbreeding gives accurate estimates of inbreeding, and the Ne determines the rate of the loss of genetic variation. [...]
2020 - 10.3390/ani10122233
Animals, Vol. 10, issue 12 (Dec. 2020) , art. 2233  
6.
21 p, 1.4 MB A Deep Catalog of Autosomal Single Nucleotide Variation in the Pig / Bianco, Erica (Centre de Recerca en Agrigenòmica) ; Nevado, Bruno (Centre de Recerca en Agrigenòmica) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica) ; Perez-Enciso, Miguel (Universitat Autònoma de Barcelona. Departament de Ciència Animal i dels Aliments)
A comprehensive catalog of variability in a given species is useful for many important purposes, e. g. , designing high density arrays or pinpointing potential mutations of economic or physiological interest. [...]
2015 - 10.1371/journal.pone.0118867
PloS one, Vol. 10 Núm. 3 (2015)  
7.
13 p, 1.4 MB The site frequency/dosage spectrum of autopolyploid populations / Ferretti, Luca (The Pirbright Institute (Regne Unit)) ; Ribeca, Paolo (The Pirbright Institute (Regne Unit)) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica)
The Site Frequency Spectrum (SFS) and the heterozygosity of allelic variants are among the most important summary statistics for population genetic analysis of diploid organisms. We discuss the generalization of these statistics to populations of autopolyploid organisms in terms of the joint Site Frequency/Dosage Spectrum and its expected value for autopolyploid populations that follow the standard neutral model. [...]
2018 - 10.3389/fgene.2018.00480
Frontiers in genetics, Vol. 9 (Oct. 2018) , art. 480  
8.
9 p, 1.3 MB Genetic diversity and selection signatures of the beef 'Charolais de Cuba' breed / Rodriguez-Valera, Yoel (Universidad de Granma. Facultad de Ciencias Agropecuarias) ; Renand, Gilles (Institut national de la recherche agronomique. Génétique Animale et Biologie Intégrative) ; Naves, Michel (Institut National de la Recherche Agronomique (França)) ; Fonseca-Jiménez, Yidix (Universidad de Granma. Facultad de Ciencias Agropecuarias) ; Moreno-Probance, Teresa Inés (Empresa de Mejora Genética Manuel Fajardo (Cuba)) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica) ; Rocha, Dominique (Institut national de la recherche agronomique. Génétique Animale et Biologie Intégrative) ; Ramayo-Caldas, Yuliaxis (Universitat Autònoma de Barcelona. Departament de Ciència Animal i dels Aliments)
In this study, we used BovineSNP50 Genotyping BeadChip data to estimate the structure, putative ancestral origin as well as to identify regions with selective sweeps that may have had an important role in the adaptation to tropical conditions of the 'Charolais de Cuba' (CHCU) breed. [...]
2018 - 10.1038/s41598-018-29453-z
Scientific reports (Nature Publishing Group), Vol. 8 (2018) , art. 11005  
9.
12 p, 836.9 KB The evolutionary consequences of transposon-related pericentromer expansion in melon / Morata, Jordi (Centre de Recerca en Agrigenòmica) ; Tormo, Marc (Centre de Recerca en Agrigenòmica) ; Alexiou, Konstantinos G. (Institut de Recerca i Tecnologia Agroalimentàries) ; Vives, Cristina (Centre de Recerca en Agrigenòmica) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica) ; Garcia-Mas, Jordi (Centre de Recerca en Agrigenòmica) ; Casacuberta i Suñer, Josep M. 1962- (Centre de Recerca en Agrigenòmica)
Transposable elements (TEs) are a major driver of plant genome evolution. A part frombeing a rich source of new genes and regulatory sequences, TEs can also affect plant genome evolution by modifying genome size and shaping chromosome structure. [...]
2018 - 10.1093/gbe/evy115
Genome biology and evolution, Vol. 10, Núm. 6 (June 2018) , p. 1584-1595  
10.
25 p, 1.2 MB A generalized Watterson estimator for next-generation sequencing : from trios to autopolyploids / Ferretti, Luca (Université Pierre et Marie CURIE) ; Ramos-Onsins, Sebastian (Centre de Recerca en Agrigenòmica)
Several variations of the Watterson estimator of variability for Next Generation Sequencing (NGS) data have been proposed in the literature. We present a unified framework for generalized Watterson estimators based on Maximum Composite Likelihood, which encompasses most of the existing estimators. [...]
2015 - 10.1016/j.tpb.2015.01.001
Theoretical population biology, Vol. 100 (March 2015) , p. 79-87  

Articles : 18 registres trobats   1 - 10següent  anar al registre:
Documents de recerca 3 registres trobats  
1.
73 p, 1.9 MB Parallelizing Population Genetics Applications / Montemuiño Sosa, Carlos ; Hernández Budé, Porfidio, dir. ; Ramos-Onsins, Sebastián, dir.
Amb la creixent disponibilitat de dades a escala de l'genoma per a la investigació genètica, els genetistes de poblacions moleculars han de treballar amb models més complexos, el que no pot fer-se en un temps determinat utilitzant el mètode coalescent estàndard. [...]
Con la creciente disponibilidad de datos a escala del genoma para la investigación genética, los genetistas de poblaciones moleculares tienen que trabajar con modelos más complejos, lo que no puede hacerse en un tiempo determinado utilizando el método coalescente estándar. [...]
With the increasing availability of genome-scale data for genetic research, molecular population geneticists need to work with more complex models, which cannot be done in a time-fashion using the standard coalescent methods. [...]
Universitat Autònoma de Barcelona. Programa de Doctorat en Informàtica.

2021  
2.
223 p, 5.1 MB Effect of domestication in the pig genome / Leno Colorado, Jordi ; Pérez Enciso, Miguel, dir. ; Ramos Onsins, Sebastián E., dir. ; Cáceres Aguilar, Mario, dir. ; Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia
La domesticación animal es un proceso realmente importante en la historia del hombre en el cual se seleccionaron diferentes rasgos de interés de los animales, como puede ser un crecimiento más rápido o una mayor docilidad. [...]
Animal domestication is an important process in the human history in which different traits of the animals were selected, such as faster growth or greater docility. To study domestication at the genetic level it is necessary to identify the markers related to this evolutionary process. [...]

[Barcelona] : Universitat Autònoma de Barcelona, 2019.  
3.
155 p, 9.2 MB Ancestry and diversity of American village pigs / Burgos Paz, William Orlando ; Perez-Enciso, Miguel, dir. (Universitat Autònoma de Barcelona. Departament de Ciència Animal i dels Aliments) ; Ramos-Onsins, Sebastian, dir. (Centre de Recerca en Agrigenòmica) ; Universitat Autònoma de Barcelona. Departament de Biologia Animal, de Biologia Vegetal i d'Ecologia
Los avances en las tecnologías de genotipado masivo están revolucionando la comprensión de los genomas de animales domésticos, incluyendo su historia y cómo los eventos demográficos y selectivos han dado forma a la variación de los genomas de los individuos. [...]
Advances in high throughput genetic technologies are revolutionizing the understanding of domestic animal genomes, including their history and how demography and selective processes have shaped the variation of individuals' genomes. [...]

[Barcelona] : Universitat Autònoma de Barcelona, 2014  

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