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1.
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9 p, 3.1 MB |
Ecosystem Microbiome Science
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Zhu, Yong-Guan (Chinese Academy of Sciences) ;
Zhu, Dong (Chinese Academy of Sciences) ;
Rillig, Matthias C. (Freie Universität Berlin) ;
Yang, Yunfeng (Tsinghua University) ;
Chu, Haiyan (Chinese Academy of Sciences) ;
Chen, Qing-Lin (The University of Melbourne) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Cui, Hui-Ling (Chinese Academy of Sciences) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences)
The microbiome contributes to multiple ecosystem functions and services through its interactions with a complex environment and other organisms. To date, however, most microbiome studies have been carried out on individual hosts or particular environmental compartments. [...]
2023 -  10.1002/mlf2.12054
mLife, Vol. 2, Issue 1 (March 2023) , p. 2-10
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2.
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Microbial controls over soil priming effects under chronic nitrogen and phosphorus additions in subtropical forests
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Li, Jian (South China Botanical Garde. Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems) ;
Liu, Zhanfeng (South China Botanical Garden. Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems) ;
Jin, Ming-Kang (Chinese Academy of Sciences. Key Laboratory of Urban Environment and Health) ;
Zhang, Wei (South China Botanical Garde. Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems) ;
Lambers, Hans (University of Western Australia. School of Biological Sciences) ;
Hui, Dafeng (Tennessee State University. Department of Biological Sciences) ;
Liang, Chao (Chinese Academy of Sciences. Institute of Applied Ecology) ;
Zhang, Jing (South China Botanical Garde. Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems) ;
Wu, Donghai (South China Botanical Garde. Key Laboratory of Vegetation Restoration and Management of Degraded Ecosystems) ;
Sardans i Galobart, Jordi (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Petticord, Daniel F. (Cornell University. Department of Ecology & Evolutionary Biology) ;
Frey, David W. (Cornell University. Department of Ecology & Evolutionary Biology) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Key Laboratory of Urban Environment and Health)
The soil priming effect (PE), defined as the modification of soil organic matter decomposition by labile carbon (C) inputs, is known to influence C storage in terrestrial ecosystems. However, how chronic nutrient addition, particularly in leguminous and non-leguminous forests, will affect PE through interaction with nutrient (e. [...]
2023 - 10.1038/s41396-023-01523-9
The ISME Journal, Published online 29 September 2023
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3.
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11 p, 3.2 MB |
Metagenomic insight into the global dissemination of the antibiotic resistome
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Zhang, Qi (Zhejiang University of Technology. College of Environment) ;
Xu, Nuohan (Zhejiang University of Technology. College of Environment) ;
Lei, Chaotang (Zhejiang University of Technology. College of Environment) ;
Chen, Bingfeng (Zhejiang University of Technology. College of Environment) ;
Wang, Tingzhang (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Ma, Yunting (Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province) ;
Lu, Tao (Zhejiang University of Technology. College of Environment) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Gillings, Michael (Macquarie University. School of Natural Sciences) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment) ;
Fu, Zhengwei (Zhejiang University of Technology. College of Environment) ;
Qian, Haifeng (Zhejiang University of Technology. College of Environment)
The global crisis in antimicrobial resistance continues to grow. Estimating the risks of antibiotic resistance transmission across habitats is hindered by the lack of data on mobility and habitat-specificity. [...]
2023 - 10.1002/advs.202303925
Advanced science, First published 23 October 2023, art. 2303925
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4.
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17 p, 2.9 MB |
Gammaproteobacteria, a core taxon in the guts of soil fauna, are potential responders to environmental concentrations of soil pollutants
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Zhang, Qi (Zhejiang University of Technology. College of Environment) ;
Zhang, Zhenyan (Zhejiang University of Technology. College of Environment) ;
Lu, Tao (Zhejiang University of Technology. College of Environment) ;
Yu, Yitian (Zhejiang University of Technology. College of Environment) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment) ;
Qian, Haifeng (Zhejiang University of Technology. College of Environment)
Background: The ubiquitous gut microbiotas acquired from the environment contribute to host health. The gut microbiotas of soil invertebrates are gradually assembled from the microecological region of the soil ecosystem which they inhabit, but little is known about their characteristics when the hosts are under environmental stress. [...]
2021 - 10.1186/s40168-021-01150-6
Microbiome, Vol. 9 (September 2021) , art. 196
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5.
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10 p, 1.2 MB |
Cyanobacterial blooms contribute to the diversity of antibiotic-resistance genes in aquatic ecosystems
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Zhang, Qi (Zhejiang University of Technology. College of Environment) ;
Zhang, Zhenyan (Zhejiang University of Technology. College of Environment) ;
Lu, Tao (Zhejiang University of Technology. College of Environment) ;
Peijnenburg, W. J. G. M. (Center for Safety of Substances and Products. National Institute of Public Health and the Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences) ;
Yang, Xiaoru (Chinese Academy of Sciences. Institute of Urban Environment) ;
Chen, Jianmeng (Zhejiang University of Technology. College of Environment) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Research Center for Ecoenvironmental Sciences. State Key Lab of Urban and Regional Ecology) ;
Zhou, Ningyi (Shanghai Jiao Tong University. State Key Laboratory of Microbial Metabolism, and School of Life Sciences & Biotechnology) ;
Su, Jianqiang (Chinese Academy of Sciences. Institute of Urban Environment) ;
Qian, Haifeng (Zhejiang University of Technology. College of Environment)
Cyanobacterial blooms are a global ecological problem that directly threatens human health and crop safety. Cyanobacteria have toxic effects on aquatic microorganisms, which could drive the selection for resistance genes. [...]
2020 - 10.1038/s42003-020-01468-1
Communications Biology, Vol. 3 (December 2020) , art. 737
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6.
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21 p, 2.0 MB |
Could global intensification of nitrogen fertilisation increase immunogenic proteins and favour the spread of Coeliac pathology?
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Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Key Laboratory of Urban Environment and Health) ;
Sardans i Galobart, Jordi (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Gargallo-Garriga, Albert (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Janssens, Ivan (University of Antwerp. Department of Biology (Belgium)) ;
Ciais, Philippe (Institute Pierre Simon Laplace. Laboratory of Climate and Environmental Sciences (France)) ;
Obersteiner, Michael (International Institute for Applied Systems Analysis (Àustria). Ecosystem Services and Management) ;
Klem, Karel (Czech Academy of Sciences. Global Change Research Institute) ;
Urban, Otmar (Czech Academy of Sciences. Global Change Research Institute)
Fertilisation of cereal crops with nitrogen (N) has increased in the last five decades. In particular, the fertilisation of wheat crops increased by nearly one order of magnitude from 1961 to 2010, from 9. [...]
2020 - 10.3390/foods9111602
Foods, Vol. 9, Issue 11 (November 2020) , art. 1602
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7.
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11 p, 608.8 KB |
Integrating biomedical, ecological, and sustainability sciences to manage emerging infectious diseases
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Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences (Australia)) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals)
Globalization accelerates the mobilization of microorganisms via international trade and transport. Growth in population, increasing connectivity, and rapid urbanization all exacerbate the consequent risk of pandemics of zoonotic diseases. [...]
2020 - 10.1016/j.oneear.2020.06.004
One Earth, Vol. 3, issue 1 (July 2020) , p. 23-26
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8.
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9 p, 1.8 MB |
Abundance of kinless hubs within soil microbial networks are associated with high functional potential in agricultural ecosystems
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Shi, Yu (Chinese Academy of Sciences. Institute of Soil Science) ;
Delgado-Vaquerizo, Manuel (Universidad Pablo de Olavide) ;
Li, Yuntao (Chinese Academy of Sciences. Institute of Soil Science) ;
Yang, Yunfeng (Tsinghua University. School of Environment) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Chu, Haiyan (Chinese Academy of Sciences. Institute of Soil Science)
Microbial taxa within complex ecological networks can be classified by their universal roles based on their level of connectivity with other taxa. Highly connected taxa within an ecological network (kinless hubs) are theoretically expected to support higher levels of ecosystem functions than less connected taxa (peripherals). [...]
2020 - 10.1016/j.envint.2020.105869
Environment International, Vol. 142 (Sep. 2020) , art. 105869
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9.
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23 p, 1.6 MB |
Antibiotic Resistomes in Plant Microbiomes
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Chen, Qing-Lin (Chinese Academy of Sciences. Institute of Urban Environment) ;
Cui, Hui-Ling (Chinese Academy of Sciences. Research Center for Eco-Environmental Sciences) ;
Su, Jian-Qiang (Chinese Academy of Sciences. Institute of Urban Environment) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment)
Microorganisms associated with plants may alter the traits of the human microbiome important for human health, but this alteration has largely been overlooked. The plant microbiome is an interface between plants and the environment, and provides many ecosystem functions such as improving nutrient uptake and protecting against biotic and abiotic stress. [...]
2019 - 10.1016/j.tplants.2019.02.010
Trends in plant science, Vol. 24, Issue 6 (June 2019) , p. 530-541
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10.
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28 p, 579.3 KB |
Human dissemination of genes and microorganisms in Earth's Critical Zone
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Zhu, Yong-Guan (Chinese Academy of Sciences. Institute of Urban Environment) ;
Gillings, Michael (Macquarie University. Department of Biological Sciences (Australia)) ;
Simonet, Pascal (Université de Lyon. Groupe de génomique microbienne environnementale) ;
Stekel, Dov (University of Nottingham) ;
Banwart, Steven (The University of Sheffield. Department of Geography) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals)
Earth's Critical Zone sustains terrestrial life and consists of the thin planetary surface layer between unaltered rock and the atmospheric boundary. Within this zone, flows of energy and materials are mediated by physical processes and by the actions of diverse organisms. [...]
2017 - 10.1111/gcb.14003
Global change biology, Vol. 24, Issue 4 (April 2018) , p. 1488-1499
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