Results overview: Found 61 records in 0.03 seconds.
Articles, 56 records found
Research literature, 5 records found
Articles 56 records found  1 - 10nextend  jump to record:
1.
21 p, 4.8 MB Different Structures-Similar Effect : Do Substituted 5-(4-Methoxyphenyl)-1 H -indoles and 5-(4-Methoxyphenyl)-1 H -imidazoles Represent a Common Pharmacophore for Substrate Selective Inhibition of Linoleate Oxygenase Activity of ALOX15? / Zhuravlev, Alexander (Russian Technological University. Lomonosov Institute of Fine Chemical Technologies) ; Cruz Saez, Alejandro (Universitat Autònoma de Barcelona. Departament de Química) ; Aksenov, Vladislav (Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry) ; Golovanov, Alexey (Russian Technological University. Lomonosov Institute of Fine Chemical Technologies) ; Lluch López, Josep Maria (Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ; Kuhn, Hartmut (Charite-University Medicine Berlin. Department of Biochemistry) ; González-Lafont, Àngels (Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ; Ivanov, Igor (Russian Technological University. Lomonosov Institute of Fine Chemical Technologies)
Mammalian 15-lipoxygenases (ALOX15) are lipid peroxidizing enzymes that exhibit variable functionality in different cancer and inflammation models. The pathophysiological role of linoleic acid- and arachidonic acid-derived ALOX15 metabolites rendered this enzyme a target for pharmacological research. [...]
2023 - 10.3390/molecules28145418
Molecules, Vol. 28, Issue 14 (July 2023) , art. 5418  
2.
29 p, 20.1 MB Hydroperoxidation of Docosahexaenoic Acid by Human ALOX12 and pigALOX15-mini-LOX / Canyelles-Niño, Miquel (Universitat Autònoma de Barcelona. Departament de Química) ; González-Lafont, Àngels (Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ; Lluch López, Josep Maria (Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí")
Human lipoxygenase 12 (hALOX12) catalyzes the conversion of docosahexaenoic acid (DHA) into mainly 14S-hydroperoxy-4Z,7Z,10Z,12E,16Z,19Z-docosahexaenoic acid (14S-H(p)DHA). This hydroperoxidation reaction is followed by an epoxidation and hydrolysis process that finally leads to maresin 1 (MaR1), a potent bioactive specialized pro-resolving mediator (SPM) in chronic inflammation resolution. [...]
2023 - 10.3390/ijms24076064
International journal of molecular sciences, Vol. 24, Issue 7 (April 2023) , art. 6064  
3.
23 p, 654.9 KB Microsolvation and Encapsulation Effects on Supramolecular Catalysis : CC Reductive Elimination inside [Ga4L6] 12- Metallocage / Norjmaa, Gantulga (Universitat Autònoma de Barcelona. Departament de Química) ; Maréchal, Jean-Didier (Universitat Autònoma de Barcelona. Departament de Química) ; Ujaque Pérez, Gregori (Universitat Autònoma de Barcelona. Departament de Química)
The host effect of the supramolecular [Ga4L6]12- tetrahedral metallocage on reductive elimination of substrate by encapsulated Au(III) complexes is investigated by means of computational methods. The behavior of the reactants in solution and within the metallocage is initially evaluated by means of classical molecular dynamics simulations. [...]
2019 - 10.1021/jacs.9b04909
Journal of the American Chemical Society, Vol. 141, Issue 33 (August 2019) , p. 13114-13123  
4.
11 p, 1.1 MB Heterogeneous Microscopic Dynamics of Intruded Water in a Superhydrophobic Nanoconfinement : Neutron Scattering and Molecular Modeling / Wolanin, Julie (Université Grenoble Alpes) ; Michel, Lucas 1923- (Université Grenoble Alpes) ; Tabacchioni, D. (Université Grenoble Alpes) ; Zanotti, Jean-Marc (Université Paris-Saclay) ; Peters, Jens-Uwe (Institut Laue Langevin) ; Imaz, Inhar (Institut Català de Nanociència i Nanotecnologia) ; Coasne, Benoit (Université Grenoble Alpes) ; Plazanet, Marie (Université Grenoble Alpes) ; Picard, Cyril (Université Grenoble Alpes)
With their strong confining porosity and versatile surface chemistry, zeolitic imidazolate frameworks-including the prototypical ZIF-8-display exceptional properties for various applications. In particular, the forced intrusion of water at high pressure (∼25 MPa) into ZIF-8 nanopores is of interest for energy storage. [...]
2021 - 10.1021/acs.jpcb.1c06791
Journal of physical chemistry B, Vol. 125, Num. 36 (September 2021) , p. 10392-10399  
5.
14 p, 12.6 MB Rational Design of Hydrogels for Cationic Antimicrobial Peptide Delivery : A Molecular Modeling Approach / Pereira, Alfredo (Universidad de Chile) ; Valdés-Muñoz, Elizabeth (Universidad Católica del Maule) ; Marican, Adolfo (Universidad de Talca) ; Cabrera-Barjas, Gustavo (Universidad de Concepción) ; Vijayakumar, Sekar (Shandong University) ; Valdés, Oscar (Universidad Católica del Maule) ; Rafael, Diana (Hospital Universitari Vall d'Hebron. Institut de Recerca) ; Andrade, Fernanda (Universitat de Barcelona. Departament de Farmàcia i Tecnologia Farmacèutica, i Fisicoquímica) ; Abaca, Paulina (Universidad de Talca. Instituto Ciencias Biologicas) ; Bustos, Daniel (Universidad Católica del Maule) ; Durán-Lara, Esteban F. (Universidad de Talca) ; Universitat Autònoma de Barcelona
In light of the growing bacterial resistance to antibiotics and in the absence of the development of new antimicrobial agents, numerous antimicrobial delivery systems over the past decades have been developed with the aim to provide new alternatives to the antimicrobial treatment of infections. [...]
2023 - 10.3390/pharmaceutics15020474
Pharmaceutics, Vol. 15 (january 2023)  
6.
8 p, 4.8 MB Ammonia capture in rhodium(II)-based metal-organic polyhedra via synergistic coordinative and H-bonding interactions / Carné-Sánchez, Arnau (Institut Català de Nanociència i Nanotecnologia) ; Martínez-Esaín, Jordi (Institut Català de Nanociència i Nanotecnologia) ; Rookard, Tanner (Oregon State University. Department of Chemistry) ; Flood, Christopher J. (Oregon State University. Department of Chemistry) ; Faraudo, Jordi (Institut de Ciència de Materials de Barcelona) ; Stylianou, Kyriakos C (Oregon State University. Department of Chemistry) ; Maspoch Comamala, Daniel (Institut Català de Nanociència i Nanotecnologia)
Ammonia (NH) is among the world's most widely produced bulk chemicals, given its extensive use in diverse sectors such as agriculture; however, it poses environmental and health risks at low concentrations. [...]
2023 - 10.1021/acsami.2c19206
ACS applied materials & interfaces, Vol. 15, issue 5 (Feb. 2023) , p. 6747-6754  
7.
40 p, 1.1 MB Computational design of molecularly imprinted polymer for direct detection of melamine in milk / Bates, Ferdia (Universitat Autònoma de Barcelona. Departament de Química) ; Busato, Mirko (University of Verona. Department of Biotechnology) ; Piletska, Elena (University of Leicester. Department of Chemistry) ; Whitcombe, Michael J. (University of Leicester. Department of Chemistry) ; Karim, Kal (University of Leicester. Department of Chemistry) ; Guerreiro, Antonio (University of Leicester. Department of Chemistry) ; Valle Zafra, Manuel del (Universitat Autònoma de Barcelona. Departament de Química) ; Giorgetti, Alejandro (University of Verona. Department of Biotechnology) ; Piletsky, Sergey (University of Leicester. Department of Chemistry)
A novel protocol for use of molecularly imprinted polymer (MIP) in analysis of melamine is presented. Design of polymer for melamine has been achieved using a combination of computational techniques and laboratory trials, the former greatly reducing the duration of the latter. [...]
2017 - 10.1080/01496395.2017.1287197
Separation Science and Technology, Vol. 52, Issue 8 (March 2017) , p. 1441-1453  
8.
21 p, 1.5 MB Predicting the Electronic Absorption Band Shape of Azobenzene Photoswitches / Gelabert Peiri, Ricard (Universitat Autònoma de Barcelona. Departament de Química) ; Moreno Ferrer, Miquel (Universitat Autònoma de Barcelona. Departament de Química) ; Lluch López, Josep Maria (Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí")
Simulations based on molecular dynamics coupled to excitation energy calculations were used to generate simulated absorption spectra for a family of halide derivatives of azobenzene, a family of photoswitch molecules with a weak absorption band around 400-600 nm and potential uses in living tissue. [...]
2023 - 10.3390/ijms24010025
International journal of molecular sciences, Vol. 24, Issue 1 (January 2023) , art. 25  
9.
8 p, 829.7 KB Strong suppression of thermal conductivity in the presence of long terminal alkyl chains in low-disorder molecular semiconductors / Selezneva, Ekaterina (University of Cambridge. Optoelectronics Group) ; Vercouter, Alexandre (University of Mons. Laboratory for Chemistry of Novel Materials) ; Schweicher, Guillaume (University of Cambridge. Optoelectronics Group) ; Lemaur, Vincent (University of Mons. Laboratory for Chemistry of Novel Materials) ; Broch, Katharina (Universität Tübingen. Institut für Angewandte Physik) ; Antidormi, Aleandro (Institut Català de Nanociència i Nanotecnologia) ; Takimiya, Kazuo (RIKEN Center for Emergent Matter Science) ; Coropceanu, Veaceslav (Georgia Institute of Technology. School of Chemistry and Biochemistry) ; Brédas, Jean-Luc (The University of Arizona. Department of Chemistry and Biochemistry) ; Melis, Claudio (Universita di Cagliari. Dipartimento di Fisica) ; Cornil, Jerome (University of Mons. Laboratory for Chemistry of Novel Materials) ; Sirringhaus, Henning (University of Cambridge. Optoelectronics Group)
While the charge transport properties of organic semiconductors have been extensively studied over the recent years, the field of organics-based thermoelectrics is still limited by a lack of experimental data on thermal transport and of understanding of the associated structure-property relationships. [...]
2021 - 10.1002/adma.202008708
Advanced materials, Vol. 33, issue 37 (Sep. 2021) , art. 2008708  
10.
8 p, 2.8 MB Emerging properties of non-crystalline phases of graphene and boron nitride based materials / Antidormi, Aleandro (Institut Català de Nanociència i Nanotecnologia) ; Colombo, Luigi (The University of Texas at Dallas. Department of Materials Science and Engineering) ; Roche, Stephan (Institut Català de Nanociència i Nanotecnologia)
We review recent developments on the synthesis and properties of two-dimensional materials which, although being mainly of an sp bonding character, exhibit highly disordered, non-uniform and structurally random morphologies. [...]
2022 - 10.1016/j.nanoms.2021.03.003
Nano Materials Science, Vol. 4, issue 1 (March 2022) , p. 10-17  

Articles : 56 records found   1 - 10nextend  jump to record:
Research literature 5 records found  
1.
24.4 MB Exploring G protein-coupled receptor allosterism by in silico methods / Díaz Sanzo, Óscar ; Giraldo, Jesús, dir.
Els receptors acoblats a proteïna G (GPCRs) són proteïnes transmembrana involucrades en el procés de senyalització cel·lular i constitueixen importants dianes terapèutiques. Donats els avenços en tècniques de cristal·lització de proteïnes en els darrers anys, actualment s'ha aconseguit la determinació estructural de més de 100 GPCRs. [...]
Los receptores acoplados a proteína G (GPCRs) son proteínas transmembrana involucradas en el proceso de señalización celular y constituyen importantes dianas terapéuticas. Dados los avances en técnicas de cristalización de proteínas en los últimos años, actualmente se ha logrado la determinación estructural de más de 100 GPCRs. [...]
G protein-coupled receptors (GPCRs) are transmembrane proteins involved in the cell signaling process and constitute important drug targets. Given the advances in crystallization techniques in the last few years, there are currently over 100 GPCRs with determined crystal structures. [...]

2023  
2.
13 p, 1.5 MB Que poden aportar les xarxes neuronals a la predicció de propietats moleculars? / Tibau Terma, Joan ; Baldrich i Caselles, Ramon, dir. (Universitat Autònoma de Barcelona. Departament de Ciències de la Computació) ; Universitat Autònoma de Barcelona. Escola d'Enginyeria
La simulació de dinàmica molecular és una tècnica computacional amplament utilitzada per a l'estudi del comportament de sistemes moleculars. Té aplicacions en la indústria farmacèutica, biologia, enginyeria de materials, física i química. [...]
La simulación de dinámica molecular es una técnica computacional ampliamente utilizada para el estudio del comportamiento de sistemas moleculares. Tiene aplicaciones en la industria farmacéutica, biología, ingeniería de materiales, física y química. [...]
Molecular dynamics simulation is a widely used computational technique for studying the behavior of molecular systems. It has applications in the pharmaceutical industry, biology, materials engineering, physics, and chemistry. [...]

2023
Enginyeria Informàtica [958]  
3.
158 p, 24.3 MB G protein-coupled receptors : providing mechanistic explanations to ligand-receptor and receptor-receptor interactions through in silico studies / Ricarte Marín, Adrián ; Giraldo, Jesús, dir. ; Dalton, James A. R, dir.
Els receptors acoblats a proteïnes G (GPCR) constitueixen la família més gran de proteïnes de membrana del genoma humà. Aquestes proteïnes de membrana estan formades per set hèlixs transmembrana connectades per bucles intracel·lulars i extracel·lulars. [...]
Los receptores acoplados a proteínas G (GPCR) constituyen la familia más grande de proteínas de membrana en el genoma humano. Estas proteínas de membrana están formadas por siete hélices transmembrana conectadas por bucles intracelulares y extracelulares. [...]
G protein-coupled receptors (GPCRs) constitute the largest family of membrane proteins in the human genome. These membrane proteins are made up of seven transmembrane helices connected by intracellular and extracellular loops. [...]

2022  
4.
161 p, 13.6 MB Investigation of the influence of the membrane lipid environment on g protein-coupled receptor activation by molecular dynamics simulations / Bruzzese Novoa, Agustín Alberto ; Giraldo, Jesús, dir. ; Dalton, James A. R..
Els receptors acoblats a proteïnes G (GPCRs) són importants dianes terapèutiques per a nombroses malalties. Si bé els GPCRs s'han estudiat àmpliament en les últimes dècades, els mecanismes moleculars que determinen la seva activació així com la seva modulació al·lostèrica per lípids de membrana no han estat elucidats íntegrament. [...]
Los receptores acoplados a proteínas G (GPCRs) son importantes dianas terapéuticas para numerosas enfermedades. Si bien los GPCRs se han estudiado ampliamente en las últimas décadas, los mecanismos moleculares que determinan su activación así como su modulación alostérica por lípidos de membrana no han sido elucidados en su totalidad. [...]
G-protein-coupled receptors (GPCRs) are important therapeutic targets for numerous diseases. Although GPCRs have been extensively studied in recent decades, the molecular mechanisms that determine their activation as well as their allosteric modulation by membrane lipids have not been fully elucidated. [...]

2021  
5.
292 p, 5.5 MB Application of Molecular Dynamics methods to the study of biological systems / Perez Benito, Laura ; Pardo Carrasco, Leonardo, dir. ; Cordomí Montoya, Arnau, dir. ; Tresadern, Gary, dir. ; Dunach, Mireia, dir. ; Universitat Autònoma de Barcelona. Departament de Bioquímica i de Biologia Molecular
La aplicación de métodos de dinámica molecular (MD) para el estudio de sistemas biológicos. Esta tesis se centra en la aplicación tanto de dinámica molecular clásica como perturbación de energía libre (FEP) para estudiar sistemas biológicos tales como los receptores acoplados a proteínas G y los inhibidores de BACE1. [...]
Application of Molecular Dynamics (MD) methods to the study of biological systems. This thesis is focused on the application of both classical MD and free energy perturbation (FEP) to study biological systems such as G protein-coupled receptors and BACE1 inhibitors. [...]

[Barcelona] : Universitat Autònoma de Barcelona, 2017  

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