Results overview: Found 5 records in 0.02 seconds.
Articles, 5 records found
Articles 5 records found  
1.
38 p, 1.7 MB Transposon insertions, structural variations, and SNPs contribute to the evolution of the melon genome / Sanseverino, Walter (Centre de Recerca en Agrigenòmica) ; Hénaff, Elizabeth (Centre de Recerca en Agrigenòmica) ; Vives, Cristina (Centre de Recerca en Agrigenòmica) ; Pinosio, Sara (Universita degli studi di Udine. Dipartimento di szience agrarie e ambientali) ; Burgos-Paz, William (Centre de Recerca en Agrigenòmica) ; Morgante, Michele (Universita degli studi di Udine. Dipartimento di szience agrarie e ambientali) ; Ramos-Onsins, Sebastián E. (Centre de Recerca en Agrigenòmica) ; Garcia Mas, Jordi (Centre de Recerca en Agrigenòmica) ; Casacuberta i Suñer, Josep M. (Centre de Recerca en Agrigenòmica)
The availability of extensive databases of crop genome sequences should allow analysis of crop variability at an unprecedented scale, which should have an important impact in plant breeding. However, up to now the analysis of genetic variability at the whole-genome scale has been mainly restricted to single nucleotide polymorphisms (SNPs). [...]
2015 - 10.1093/molbev/msv152
Molecular biology and evolution, Vol. 32, issue 10 (Oct. 2015) , p. 2760-74  
2.
38 p, 2.5 MB Porcine Y-chromosome variation is consistent with the occurrence of paternal gene flow from non-Asian to Asian populations / Guirao-Rico, Sara (Centre de Recerca en Agrigenòmica) ; Ramírez Bellido, Óscar (Universitat Autònoma de Barcelona. Departament de Ciència Animal i dels Aliments) ; Ojeda García, Ana (Universitat Autònoma de Barcelona. Departament de Ciència Animal i dels Aliments) ; Amills i Eras, Marcel (Centre de Recerca en Agrigenòmica) ; Ramos-Onsins, Sebastián E. (Centre de Recerca en Agrigenòmica)
Pigs (Sus scrofa) originated in Southeast Asia and expanded to Europe and North Africa approximately 1 MYA. Analyses of porcine Y-chromosome variation have shown the existence of two main haplogroups that are highly divergent, a result that is consistent with previous mitochondrial and autosomal data showing that the Asian and non-Asian pig populations remained geographically isolated until recently. [...]
2018 - 10.1038/s41437-017-0002-9
Heredity, Vol. 120 (2018) , p. 63–76  
3.
13 p, 2.1 MB Population genetic analysis of bi-allelic structural variants from low-coverage sequence data with an expectation-maximization algorithm / Lucas-Lledó, José Ignacio (Leibniz-Institute of Freshwater Ecology and Inland Fisheries (IGB)) ; Vicente Salvador, David (Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ; Aguado, Cristina (Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ; Cáceres Aguilar, Mario (Institució Catalana de Recerca i Estudis Avançats)
Population genetics and association studies usually rely on a set of known variable sites that are then genotyped in subsequent samples, because it is easier to genotype than to discover the variation. [...]
2014 - 10.1186/1471-2105-15-163
BMC Bioinformatics, Vol. 15 (May 2014) , art. 163  
4.
14 p, 1.6 MB Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs / Esteve Codina, Anna (Centre de Recerca en Agrigenòmica) ; Paudel, Yogesh (Wageningen University. Animal Breeding and Genomics Centre) ; Ferretti, Luca (Centre de Recerca en Agrigenòmica) ; Raineri, Emanuele (Centre Nacional d'Anàlisi Genòmica) ; Megens, Hendrik-Jan (Wageningen University. Animal Breeding and Genomics Centre) ; Silió, Luis (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria. Departamento de Mejora Genética Animal) ; Rodríguez, María C (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria. Departamento de Mejora Genética Animal) ; Groenen, Martein AM (Wageningen University. Animal Breeding and Genomics Centre) ; Ramos-Onsins, Sebastián E. (Centre de Recerca en Agrigenòmica) ; Pérez-Enciso, Miguel (Centre de Recerca en Agrigenòmica)
In contrast to international pig breeds, the Iberian breed has not been admixed with Asian germplasm. This makes it an important model to study both domestication and relevance of Asian genes in the pig. [...]
2013 - 10.1186/1471-2164-14-148
BMC Genomics, Vol. 14 (March 2013) , art. 148  
5.
16 p, 773.0 KB Jitterbug : somatic and germline transposon insertion detection at single-nucleotide resolution / Hénaff, Elizabeth (Centre de Recerca en Agrigenòmica) ; Zapata, Luís (Centre de Regulació Genòmica (Barcelona)) ; Casacuberta i Suñer, Josep M. (Centre de Recerca en Agrigenòmica) ; Ossowski, Stephan (Centre de Regulació Genòmica (Barcelona))
2015 - 10.1186/s12864-015-1975-5
BMC Genomics, Vol. 16 art. 768 (2015)  

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