UAB Digital Repository of Documents 45 records found  1 - 10nextend  jump to record: Search took 0.01 seconds. 
1.
10 p, 1.1 MB An Improved Melon Reference Genome With Single-Molecule Sequencing Uncovers a Recent Burst of Transposable Elements With Potential Impact on Genes / Castanera, Raúl (Centre de Recerca en Agrigenòmica) ; Ruggieri, Valentino (Centre de Recerca en Agrigenòmica) ; Pujol, Marta (Centre de Recerca en Agrigenòmica) ; Garcia Mas, Jordi (Centre de Recerca en Agrigenòmica) ; Casacuberta i Suñer, Josep M. 1962- (Centre de Recerca en Agrigenòmica)
The published melon (Cucumis melo L. ) reference genome assembly (v3. 6. 1) has still 41. 6 Mb (Megabases) of sequences unassigned to pseudo-chromosomes and about 57 Mb of gaps. Although different approaches have been undertaken to improve the melon genome assembly in recent years, the high percentage of repeats (~40%) and limitations due to read length have made it difficult to resolve gaps and scaffold's misassignments to pseudomolecules, especially in the heterochromatic regions. [...]
2020 - 10.3389/fpls.2019.01815
Frontiers in plant science, Vol. 10 (January 2020) , art. 1815  
2.
15 p, 2.5 MB Inactivation of UDP-Glucose Sterol Glucosyltransferases Enhances Arabidopsis Resistance to Botrytis cinerea / Castillo, Nídia (Centre de Recerca en Agrigenòmica) ; Pastor, Victòria (Univesitat Jaume I. Departament de Ciències Agràries i del Medi Natural) ; Chávez, Ángel (Centre de Recerca en Agrigenòmica) ; Arró i Plans, Montserrat (Centre de Recerca en Agrigenòmica) ; Boronat i Margosa, Albert (Centre de Recerca en Agrigenòmica) ; Flors, Victor (Univesitat Jaume I. Departament de Ciències Agràries i del Medi Natural) ; Ferrer i Prats, Albert (Centre de Recerca en Agrigenòmica) ; Altabella Artigas, Teresa (Centre de Recerca en Agrigenòmica)
Free and glycosylated sterols are both structural components of the plasma membrane that regulate their biophysical properties and consequently different plasma membrane-associated processes such as plant adaptation to stress or signaling. [...]
2019 - 10.3389/fpls.2019.01162
Frontiers in plant science, Vol. 10 (September 2019) , art. 1162  
3.
11 p, 2.5 MB CmVPS41 Is a General Gatekeeper for Resistance to Cucumber Mosaic Virus Phloem Entry in Melon / Pascual, Laura (Centre de Recerca en Agrigenòmica) ; Jinqiang, Yan (Centre de Recerca en Agrigenòmica) ; Pujol, Marta (Centre de Recerca en Agrigenòmica) ; Monforte, Antonio J. (Universitat Politècnica de València. Instituto de Biología Molecular y Celular de Plantas) ; Picó Silvent, Belén (Instituto de Conservación y Mejora de la Agrodiversidad Valenciana) ; Martín-Hernández, Ana Montserrat (Centre de Recerca en Agrigenòmica)
Melon production is often compromised by viral diseases, which cannot be treated with chemicals. Therefore, the use of genetic resistances is the main strategy for generating crops resistant to viruses. [...]
2019 - 10.3389/fpls.2019.01219
Frontiers in plant science, Vol. 10 (October 2019) , art. 1219  
4.
16 p, 3.1 MB Expression QTL (eQTLs) Analyses Reveal Candidate Genes Associated With Fruit Flesh Softening Rate in Peach [Prunus persica (L.) Batsch] / Carrasco-Valenzuela, Tomás (Universidad Andres Bello. Centro de Biotecnología Vegetal) ; Muñoz-Espinoza, Claudia (Universidad Andres Bello. Centro de Biotecnología Vegetal) ; Riveros, Aníbal (Universidad Andres Bello. Centro de Biotecnología Vegetal) ; Pedreschi, Romina (Pontificia Universidad Católica de Valparaíso. Escuela de Agronomía) ; Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ; Campos-Vargas, Reinaldo (Universidad Andres Bello. Centro de Biotecnología Vegetal) ; Meneses, Claudio (Universidad Andres Bello. Centro de Biotecnología Vegetal)
Significant differences in softening rate have been reported between melting flesh in peach and nectarine varieties. This trait seems to be controlled by several genes. We aimed to identify candidate genes involved in fruit softening rate by integrating quantitative trait loci (QTL) and expression QTL (eQTL) analyses, comparing siblings with contrasting softening rates. [...]
2019 - 10.3389/fpls.2019.01581
Frontiers in plant science, Vol. 10 (December 2019) , art. 1581  
5.
10 p, 1.6 MB Mapping Cucumber Vein Yellowing Virus Resistance in Cucumber (Cucumis sativus L.) by Using BSA-seq Analysis / Pujol, Marta (Centre de Recerca en Agrigenòmica) ; Alexiou, Konstantinos G. (Centre de Recerca en Agrigenòmica) ; Fontaine, Anne-Sophie (Semillas Fitó S.A.) ; Mayor, Patricia (Centro de Edafología y Biología Aplicada del Segura. Departamento de Biología del Estrés y Patología Vegetal) ; Miras, Manuel (Centro de Edafología y Biología Aplicada del Segura. Departamento de Biología del Estrés y Patología Vegetal) ; Jahrmann, Torben (Semillas Fitó S.A.) ; Garcia Mas, Jordi (Centre de Recerca en Agrigenòmica) ; Aranda, Miguel A. (Centro de Edafología y Biología Aplicada del Segura. Departamento de Biología del Estrés y Patología Vegetal)
Cucumber vein yellowing virus (CVYV) causes severe yield losses in cucurbit crops across Mediterranean countries. The control of this virus is based on cultural practices to prevent the presence of its vector (Bemisia tabaci) and breeding for natural resistance, which requires the identification of the loci involved and the development of molecular markers for linkage analysis. [...]
2019 - 10.3389/fpls.2019.01583
Frontiers in plant science, Vol. 10 (December 2019) , art. 1583  
6.
15 p, 4.7 MB Two Loci, RiAF3 and RiAF4, Contribute to the Annual-Fruiting Trait in Rubus / Jibran, Rubina (Palmerston North Research Centre. The New Zealand Institute for Plant Food Research Limited) ; Spencer, Jessica (North Carolina State University. Department of Horticultural Science) ; Fernandez, Gina (North Carolina State University. Department of Horticultural Science) ; Monfort Vives, Amparo (Centre de Recerca en Agrigenòmica) ; Mnejja, Mourad (Centre de Recerca en Agrigenòmica) ; Dzierzon, Helge (Palmerston North Research Centre. The New Zealand Institute for Plant Food Research Limited) ; Tahir, Jibran (Palmerston North Research Centre. The New Zealand Institute for Plant Food Research Limited) ; Davies, Kevin (Palmerston North Research Centre. The New Zealand Institute for Plant Food Research Limited) ; Chagné, David (Palmerston North Research Centre. The New Zealand Institute for Plant Food Research Limited) ; Foster, Toshi M. (Palmerston North Research Centre. The New Zealand Institute for Plant Food Research Limited)
Most Rubus species have a biennial cycle of flowering and fruiting with an intervening period of winter dormancy, in common with many perennial fruit crops. Annual-fruiting (AF) varieties of raspberry (Rubus idaeus and Rubus occidentalis L. [...]
2019 - 10.3389/fpls.2019.01341
Frontiers in Plant Science, Vol. 10 (October 2019) , art. 1341  
7.
7 p, 1.9 MB Manipulation of plastidial protein quality control components as a new strategy to improve carotenoid contents in tomato fruit / D'Andrea, Lucio (Centre de Recerca en Agrigenòmica) ; Rodríguez Concepción, Manuel (Centre de Recerca en Agrigenòmica)
Carotenoids such as β-carotene (pro-vitamin A) and lycopene accumulate at high levels during tomato (Solanum lycopersicum L. ) fruit ripening, contributing to the characteristic color and nutritional quality of ripe tomatoes. [...]
2019 - 10.3389/fpls.2019.01071
Frontiers in plant science, Vol. 10 (September 2019) , art. 1071  
8.
17 p, 1.3 MB Under a new light : Regulation of light-dependent pathways by non-coding RNAs / Sánchez Retuerta, Camila (Centre de Recerca en Agrigenòmica) ; Suárez-López, Paula (Centre de Recerca en Agrigenòmica) ; Henriques, Rossana (Centre de Recerca en Agrigenòmica)
The biological relevance of non-protein coding RNAs in the regulation of critical plant processes has been firmly established in recent years. This has been mostly achieved with the discovery and functional characterization of small non-coding RNAs, such as small interfering RNAs and microRNAs (miRNAs). [...]
2018 - 10.3389/fpls.2018.00962
Frontiers in plant science, Vol. 9 (July 2018) , art. 962  
9.
15 p, 2.5 MB Transcriptome-wide identification of novel UV-B- and light modulated flavonol pathway genes controlled by VviMYBF1 / Czemmel, Stefan (Universität Tübingen (Alemanya). Zentrum für Quantitative Biologie) ; Höll, Janine (Universität Heidelberg. Centre for Organismal Studies Heidelberg) ; Loyola, Rodrigo (Pontificia Universidad Católica de Chile. Departamento de Genética Molecular y Microbiología) ; Arce-Johnson, Patricio (Pontificia Universidad Católica de Chile. Departamento de Genética Molecular y Microbiología) ; Alcalde, José Antonio (Pontificia Universidad Católica de Chile. Departamento de Fruticultura y Enología) ; Matus, José Tomás (Centre de Recerca en Agrigenòmica) ; Bogs, Jochen (Universität Heidelberg. Centre for Organismal Studies Heidelberg)
Flavonols constitute a group of flavonoids with important photoprotective roles in plants. In addition, flavonol content and composition greatly influences fruit quality. We previously demonstrated that the grapevine R2R3-MYB transcription factor (TF) VviMYBF1 promotes flavonol accumulation by inducing the expression of flavonol synthase (VviFLS1/VviFLS4), a key step of the initial flavonol pathway. [...]
2017 - 10.3389/fpls.2017.01084
Frontiers in plant science, Vol. 8 (June 2017) , art. 1084  
10.
15 p, 5.6 MB The four FAD-dependent histone demethylases of arabidopsis are differently involved in the control of flowering time / Martignago, Daminao (Centre de Recerca en Agrigenòmica) ; Bernardini, Benedetta (Università Roma Tre. Dipartimento di Scienze) ; Polticelli, Fabio (Università Roma Tre. Dipartimento di Scienze) ; Salvi, Daniele (Università degli Studi dell'Aquila. Medicina clinica, sanità pubblica, scienze della vita e dell'ambiente) ; Cona, Alessandra (Università Roma Tre. Dipartimento di Scienze) ; Angelini, Riccardo (Università Roma Tre. Dipartimento di Scienze) ; Tavladoraki, Paraskevi (Università Roma Tre. Dipartimento di Scienze)
In Arabidopsis thaliana, four FAD-dependent lysine-specific histone demethylases (LDL1, LDL2, LDL3, and FLD) are present, bearing both a SWIRM and an amine oxidase domain. In this study, a comparative analysis of gene structure, evolutionary relationships, tissue- and organ-specific expression patterns, physiological roles and target genes for the four Arabidopsis LDL/FLDs is reported. [...]
2019 - 10.3389/fpls.2019.00669
Frontiers in plant science, Vol. 10 (June 2019) , art. 669  

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