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9 p, 872.0 KB |
Coping-Style Behavior Identified by a Survey of Parent-of-Origin Effects in the Rat
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Mont, Carme (Wellcome Trust Centre for Human Genetics (Oxford, Regne Unit)) ;
Hernandez-Pliego, Polinka (Wellcome Trust Centre for Human Genetics (Oxford, Regne Unit)) ;
Cañete, Toni (Universitat Autònoma de Barcelona. Institut de Neurociències) ;
Oliveras, Ignasi (Universitat Autònoma de Barcelona. Institut de Neurociències) ;
Río-Álamos, Cristóbal (Universitat Autònoma de Barcelona. Institut de Neurociències) ;
Blázquez Romero, Glòria (Universitat de Barcelona. Fundació Bosch i Gimpera) ;
López-Aumatell, Regina (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ;
Martínez-Membrives, Esther (Universitat Autònoma de Barcelona. Institut de Neurociències) ;
Tobeña, Adolf 1950- (Universitat Autònoma de Barcelona. Institut de Neurociències) ;
Flint, Jonathan (Center for Neurobehavioral Genetics, University of California Los Angeles, Los Angeles, California) ;
Fernández-Teruel, Alberto (Universitat Autònoma de Barcelona. Departament de Psiquiatria i de Medicina Legal) ;
Mott, Richard (Genetics Institute, University College London, London WC1E 6BT, UK)
In this study we investigate the effects of parent of origin on complex traits in the laboratory rat, with a focus on coping style behavior in stressful situations. We develop theory, based on earlier work, to partition heritability into a component due to a combination of parent of origin, maternal, paternal and shared environment, and another component that estimates classical additive genetic variance. [...]
2018 -  10.1534/g3.118.200489
G3, Vol. 8 (august 2018) , p. 3283-3291
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8 p, 821.6 KB |
Genome-Wide Association Analysis for Resistance to Infectious Pancreatic Necrosis Virus Identifies Candidate Genes Involved in Viral Replication and Immune Response in Rainbow Trout (Oncorhynchus mykiss)
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Rodríguez, Francisco H. (Universidad Nacional del Altiplano. Facultad de Medicina Veterinaria y Zootecnia) ;
Flores-Mara, Raúl (Universidad Andina Néstor Cáceres Velásquez. Escuela Profesional de Medicina Veterinaria y Zootecnia) ;
Yoshida, Grazyella M. (Benchmark Genetics Chile) ;
Barría, Agustín (Universidad de Chile. Facultad de Ciencias Veterinarias y Pecuarias) ;
Jedlicki, Ana M. (Universidad de Chile. Facultad de Ciencias Veterinarias y Pecuarias) ;
Lhorente, Jean P. (Benchmark Genetics Chile) ;
Reyes-López, Felipe E. (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia) ;
Yáñez, José M. (Núcleo Milenio INVASAL)
Infectious pancreatic necrosis (IPN) is a viral disease with considerable negative impact on the rainbow trout (Oncorhynchus mykiss) aquaculture industry. The aim of the present work was to detect genomic regions that explain resistance to infectious pancreatic necrosis virus (IPNV) in rainbow trout. [...]
2019 - 10.1534/g3.119.400463
G3, Vol. 9 (july 2019) , p. 2897-2904
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11 p, 1.7 MB |
Dynamic Interactions Between the Genome and an Endogenous Retrovirus : Tirant in Drosophila simulans Wild-Type Strains
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Fablet, Marie (Université de Lyon. Laboratoire de Biométrie et Biologie Evolutive) ;
Jacquet, Angelo (Université de Lyon. Laboratoire de Biométrie et Biologie Evolutive) ;
Rebollo, Rita (Université de Lyon. INSA-Lyon, INRA) ;
Haudry, Annabelle (Université de Lyon. Laboratoire de Biométrie et Biologie Evolutive) ;
Rey, Carine (Université de Lyon. Laboratoire de Biologie et Modélisation de la Cellule) ;
Salces-Ortiz, Judit (Université de Lyon. Laboratoire de Biométrie et Biologie Evolutive) ;
Bajad, Prajakta (Medical University of Vienna. Center for Anatomy and Cell Biology, Division of Cell- and Developmental Biology) ;
Burlet, Nelly (Université de Lyon. Laboratoire de Biométrie et Biologie Evolutive) ;
Jantsch, Michael F. (Medical University of Vienna. Center for Anatomy and Cell Biology, Division of Cell- and Developmental Biology) ;
García Guerreiro, María Pilar (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Vieira, Cristina (Université de Lyon. Laboratoire de Biométrie et Biologie Evolutive)
All genomes contain repeated sequences that are known as transposable elements (TEs). Among these are endogenous retroviruses (ERVs), which are sequences similar to retroviruses and are transmitted across generations from parent to progeny. [...]
2019 - 10.1534/g3.118.200789
G3, Vol. 9, Num. 3 (March 2019) , p. 855-865
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19 p, 1.6 MB |
The role of UV-B light on small RNA activity during grapevine berry development
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Sunitha, Sukumaran (Texas Tech University. Department of Biological Sciences) ;
Loyola, Rodrigo (Pontificia Universidad Católica de Chile. Departamento de Genética Molecular y Microbiología) ;
Alcalde, José Antonio (Pontificia Universidad Católica de Chile. Departamento de Fruticultura y Enología) ;
Arce-Johnson, Patricio (Pontificia Universidad Católica de Chile. Departamento de Genética Molecular y Microbiología) ;
Matus, José Tomás (Centre de Recerca en Agrigenòmica) ;
Rock, Christopher D. (Texas Tech University. Department of Biological Sciences)
We explored the effects of ultraviolet B radiation (UV-B) on the developmental dynamics of microRNAs and phased small-interfering-RNA (phasi-RNAs)-producing loci by sequencing small RNAs in vegetative and reproductive organs of grapevine (Vitis vinifera L. [...]
2019 - 10.1534/g3.118.200805
G3, Vol. 9, issue 3 (March 2019) , p. 769-787
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4 p, 557.8 KB |
Evolution of plant phenotypes, from genomes to traits
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Casacuberta i Suñer, Josep M. 1962- (Centre de Recerca en Agrigenòmica) ;
Jackson, Scott (University of Georgia (Tbilisi, Geòrgia). Center for Applied Genetic Technologies) ;
Panaud, Olivier (Université de Perpignan. Laboratoire Génome et Développement des Plantes) ;
Purugganan, Michael (New York University. Center for Genomics and Systems Biology) ;
Wendel, Jonathan (Iowa State University. Department of Ecology, Evolution and Organismal Biology)
2016 - 10.1534/g3.115.025502
G3, Vol. 6, issue 4 (April 2016) , p. 775-778
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12 p, 2.3 MB |
Genotyping by sequencing in almond : SNP discovery, linkage mapping, and marker sesign
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Goonetilleke, Shashi N. (The University of Adelaide. School of Agriculture, Food and Wine) ;
March, Timothy J. (The University of Adelaide. School of Agriculture, Food and Wine) ;
Wirthensohn, Michelle (The University of Adelaide. School of Agriculture, Food and Wine) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ;
Walker, Amanda R. (The University of Adelaide. School of Agriculture, Food and Wine) ;
Mather, Diane E. (The University of Adelaide. School of Agriculture, Food and Wine)
In crop plant genetics, linkage maps provide the basis for the mapping of loci that affect important traits and for the selection of markers to be applied in crop improvement. In outcrossing species such as almond (Prunus dulcis Mill. [...]
2017 - 10.1534/g3.117.300376
G3, Vol. 8, issue 1 (Jan. 2018) , p. 161-172
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14 p, 2.2 MB |
A pathway-centered analysis of pig domestication and breeding in Eurasia
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Leno Colorado, Jordi (Centre de Recerca en Agrigenòmica) ;
Hudson, Nick J. (University of Queensland. School of Agriculture and Food Science) ;
Reverter, Antonio (Commonwealth Scientific and Industrial Research Organisation) ;
Perez-Enciso, Miguel (Centre de Recerca en Agrigenòmica)
Ascertaining the molecular and physiological basis of domestication and breeding is an active area of research. Due to the current wide distribution of its wild ancestor, the wild boar, the pig (Sus scrofa) is an excellent model to study these processes, which occurred independently in East Asia and Europe ca. [...]
2017 - 10.1534/g3.117.042671
G3, Vol. 7 (July 2017) , p. 2171-2184
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7 p, 1018.1 KB |
Analysis of Plasminogen Genetic Variants in Multiple Sclerosis Patients
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Sadovnick, A. Dessa (University of British Columbia) ;
Traboulsee, Anthony L. (University of British Columbia) ;
Bernales, Cecily Q. (University of British Columbia) ;
Ross, Jay P. (University of British Columbia) ;
Forwell, Amanda L. (University of British Columbia) ;
Yee, Irene M. (University of British Columbia) ;
Guillot-Noel, Lena (Inserm U 1127, CNRS UMR 7225, Sorbonne Universités, UPMC Univ Paris 06 UMR S 1127, Institut du Cerveau et de la Moelle épinière, ICM, France) ;
Fontaine, Bertrand (Inserm U 1127, CNRS UMR 7225, Sorbonne Universités, UPMC Univ Paris 06 UMR S 1127, Institut du Cerveau et de la Moelle épinière, ICM, France) ;
Cournu-Rebeix, Isabelle (Inserm U 1127, CNRS UMR 7225, Sorbonne Universités, UPMC Univ Paris 06 UMR S 1127, Institut du Cerveau et de la Moelle épinière, ICM, France) ;
Alcina, Antonio (Instituto de Parasitología y Biomedicina "López-Neyra") ;
Fedetz, Maria (Hospital Universitario Virgen Macarena (Sevilla, Andalusia)) ;
Izquierdo, Guillermo (Hospital Universitario Virgen Macarena (Sevilla, Andalusia)) ;
Matesanz, Fuencisla (Instituto de Parasitología y Biomedicina "López-Neyra") ;
Hilven, Kelly (University of Leuven) ;
Dubois, Bénédicte (University Hospitals Leuven (Bèlgica)) ;
Goris, An (University of Leuven) ;
Astobiza, Ianire (Achucarro Basque Center for Neuroscience) ;
Alloza, Iraide (IKERBASQUE, Basque Foundation for Science) ;
Antigüedad, Alfredo (Hospital de Basurto (Bilbao, Biscaia)) ;
Vandenbroeck, Koen (IKERBASQUE, Basque Foundation for Science) ;
Akkad, Denis A. (Ruhr University) ;
Aktas, Orhan (Heinrich Heine University) ;
Blaschke, Paul (University of Rostock) ;
Buttmann, Mathias (University of Würzburg) ;
Chan, Andrew (Bern University Hospital) ;
Epplen, Joerg T. (Ruhr University) ;
Gerdes, Lisa-Ann (Institute for Clinical Neuroimmunology, Ludwig Maximilian University) ;
Kroner, Antje (Medical College of Wisconsin) ;
Kubisch, Christian (University Medical Center Hamburg-Eppendorf) ;
Kümpfel, Tania (Ludwig Maximilian University) ;
Lohse, Peter (Institute of Laboratory Medicine and Human Genetics) ;
Rieckmann, Peter (Sozialstiftung Bamberg Hospital) ;
Zettl, Uwe K. (University of Rostock) ;
Zipp, Frauke (University Medical Center of the Johannes Gutenberg-University Mainz) ;
Bertram, Lars (Imperial College London) ;
Lill, Christina M. (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Fernández, Oscar (Instituto de Investigación Biomédica de Málaga) ;
Urbaneja, Patricia (Instituto de Investigación Biomédica de Málaga) ;
Leyva, Laura (Instituto de Investigación Biomédica de Málaga) ;
Alvarez-Cermeño, José C (Instituto Ramón y Cajal de Investigación Sanitaria (Madrid)) ;
Arroyo, Rafael (Instituto de Investigación Sanitaria del Hospital Clínico San Carlos) ;
Garagorri, Aroa M. (Instituto de Investigación Sanitaria del Hospital Clínico San Carlos) ;
García-Martínez, Angel (Instituto de Investigación Sanitaria del Hospital Clínico San Carlos) ;
Villar, Luisa M. (Hospital Universitario Ramón y Cajal (Madrid)) ;
Urcelay, Elena (Instituto de Investigación Sanitaria del Hospital Clínico San Carlos) ;
Malhotra, Sunny (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Montalban, Xavier (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Comabella, Manuel (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Berger, Thomas (Medical University of Innsbruck) ;
Fazekas, Franz (Medical University of Graz) ;
Reindl, Markus (Medical University of Innsbruck) ;
Schmied, Mascha C. (Medical University of Vienna) ;
Zimprich, Alexander (Medical University of Vienna) ;
Vilariño-Güell, Carles (University of British Columbia) ;
Universitat Autònoma de Barcelona
Multiple sclerosis (MS) is a prevalent neurological disease of complex etiology. Here, we describe the characterization of a multi-incident MS family that nominated a rare missense variant (p. G420D) in plasminogen (PLG) as a putative genetic risk factor for MS. [...]
2016 - 10.1534/g3.116.030841
G3, Vol. 6 (may 2016) , p. 2073-2079
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