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13 p, 1.2 MB |
Modulating climacteric intensity in melon through QTL stacking
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Santo Domingo, Miguel (Centre de Recerca en Agrigenòmica) ;
Areco, Lorena (Centre de Recerca en Agrigenòmica) ;
Mayobre, Carlos (Centre de Recerca en Agrigenòmica) ;
Valverde, Laura (Centre de Recerca en Agrigenòmica) ;
Martín-Hernández, Ana Montserrat (Centre de Recerca en Agrigenòmica) ;
Pujol Abajo, Marta (Centre de Recerca en Agrigenòmica) ;
Garcia-Mas, Jordi (Centre de Recerca en Agrigenòmica)
Fruit ripening is one of the main processes affecting fruit quality and shelf life. In melon there are both climacteric and non-climacteric genotypes, making it a suitable species to study fruit ripening. [...]
2022 -  10.1093/hr/uhac131
Horticulture research, Vol. 9 (June 2022) , art. uhac131
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12 p, 1.5 MB |
An LTR retrotransposon in the promoter of a PsMYB10.2 gene associated with the regulation of fruit flesh color in Japanese plum
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Fiol, Arnau (Centre de Recerca en Agrigenòmica) ;
García Carbonell, Sergio (Centre de Recerca en Agrigenòmica) ;
Dujak, Christian (Centre de Recerca en Agrigenòmica) ;
Pacheco, Igor (Universidad de Chile. Instituto de Nutrición y Tecnología de Alimentos) ;
Infante, Rodrigo (Universidad de Chile. Departamento de Producción Agrícola) ;
Aranzana, Maria José (Centre de Recerca en Agrigenòmica)
Japanese plums exhibit wide diversity of fruit coloration. The red to black hues are caused by the accumulation of anthocyanins, while their absence results in yellow, orange or green fruits. In Prunus, MYB10 genes are determinants for anthocyanin accumulation. [...]
2022 - 10.1093/hr/uhac206
Horticulture research, Vol. 9 (September 2022) , art. uhac206
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4.
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18 p, 888.4 KB |
New insights into flowering date in Prunus : fine mapping of a major QTL in sweet cherry
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Branchereau, Camille (Université de Bordeaux. INRAE) ;
Quero-García, José (Université de Bordeaux. INRAE) ;
Zaracho, Nathalia (Centre de Recerca en Agrigenòmica) ;
Lambelin, Laurine (Université de Bordeaux. INRAE) ;
Fouché, Mathieu (Université de Bordeaux. INRAE) ;
Wenden, Bénédicte (Université de Bordeaux. INRAE) ;
Donkpegan, Armel S.L. (Centre INRAE Val de Loire) ;
Le Dantec, Loïck (Université de Bordeaux. INRAE) ;
Barreneche, Teresa (Université de Bordeaux. INRAE) ;
Alletru, David (INRAE. Unité Expérimentale Arboricole (Toulenne)) ;
Parmentier, Julien (INRAE. Unité Expérimentale Arboricole (Toulenne)) ;
Dirlewanger, Elisabeth (Université de Bordeaux. INRAE)
Flowering date is an important trait in Prunus fruit species, especially for their adaptation in a global warming context. Numerous quantitative trait loci (QTLs) have been identified and a major one was previously located on LG4. [...]
2022 - 10.1093/hr/uhac042
Horticulture research, Vol. 9 (February 2022) , art. uhac042
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11 p, 1.1 MB |
Construction of a collection of introgression lines of "Texas" almond DNA fragments in the "Earlygold" peach genetic background
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Kalluri, Naveen (Centre de Recerca en Agrigenòmica) ;
Serra, Octávio (Instituto Nacional de Investigação Agrária e Veterinária (Braga)) ;
Donoso Contreras, José M (Instituto de Investigaciones Agropecuarias (Chile)) ;
Picañol, Roger (Rijk Zwaan Ibérica S.A.) ;
Howad, Werner (Centre de Recerca en Agrigenòmica) ;
Eduardo, Iban (Centre de Recerca en Agrigenòmica) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica)
Peach [ Prunus persica L. Batsch] is one of the major temperate fruit tree species, the commercial materials of which have a low level of genetic variability. Almond [ P. dulcis (Mill) DA Webb], a close relative of peach cultivated for its kernels, has a much higher level of diversity. [...]
2022 - 10.1093/hr/uhac070
Horticulture research, Vol. 9 (March 2022) , art. uhac070
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22 p, 1.9 MB |
Genetic architecture and genomic predictive ability of apple quantitative traits across environments
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Jung, Michaela (Institute of Agricultural Sciences (Zurich)) ;
Keller, Beat (Institute of Agricultural Sciences (Zurich)) ;
Roth, Morgane (Agroscope (Wädenswil)) ;
Aranzana, Maria José (Centre de Recerca en Agrigenòmica) ;
Auwerkerken, Annemarie (Better3fruit N.V (Belgium)) ;
Guerra, Walter (Research Centre Laimburg) ;
Al-Rifaï, Mehdi (Université Angers) ;
Lewandowski, Mariusz (The National Institute of Horticultural Research (Poland)) ;
Sanin, Nadia (Research Centre Laimburg) ;
Rymenants, Marijn (Laboratory for Plant Genetics and Crop Improvement (Belgium)) ;
Didelot, Frédérique (INRAE. Unité expérimentale Horticole) ;
Dujak, Christian (Centre de Recerca en Agrigenòmica) ;
Font i Forcada, Carolina (Institut de Recerca i Tecnologia Agroalimentàries) ;
Knauf, Andrea (Institute of Agricultural Sciences (Zurich)) ;
Laurens, François (Université Angers) ;
Studer, Bruno (Institute of Agricultural Sciences (Zurich)) ;
Muranty, Hélène (Université Angers) ;
Patocchi, Andrea (Agroscope (Wädenswil))
Implementation of genomic tools is desirable to increase the efficiency of apple breeding. Recently, the multi-environment apple reference population (apple REFPOP) proved useful for rediscovering loci, estimating genomic predictive ability, and studying genotype by environment interactions (G × E). [...]
2022 - 10.1093/hr/uhac028
Horticulture research, Vol. 9 (February 2022) , art. uhac028
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18 p, 7.7 MB |
Genetic dissection of climacteric fruit ripening in a melon population segregating for ripening behavior
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Pereira, Lara (Centre de Recerca en Agrigenòmica) ;
Santo Domingo, Miguel (Centre de Recerca en Agrigenòmica) ;
Ruggieri, Valentino (Centre de Recerca en Agrigenòmica) ;
Argyris, Jason (Centre de Recerca en Agrigenòmica) ;
Phillips, Michael A. (University of Toronto. Department of Biology) ;
Zhao, Guangwei (Zhengzhou Fruit Research Institute) ;
Lian, Qun (Agricultural Genomics Institute at Shenzhen) ;
Xu, Yongyang (Zhengzhou Fruit Research Institute) ;
He, Yuhua (Zhengzhou Fruit Research Institute) ;
Huang, Sanwen (Agricultural Genomics Institute at Shenzhen) ;
Pujol Abajo, Marta (Centre de Recerca en Agrigenòmica) ;
Garcia-Mas, Jordi (Centre de Recerca en Agrigenòmica)
Melon is as an alternative model to understand fruit ripening due to the coexistence of climacteric and non-climacteric varieties within the same species, allowing the study of the processes that regulate this complex trait with genetic approaches. [...]
2020 - 10.1038/s41438-020-00411-z
Horticulture research, Vol. 7 (November 2020) , art. 187
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16 p, 1.3 MB |
The apple REFPOP-a reference population for genomics-assisted breeding in apple
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Jung, Michaela (Breeding Research group (Switzerland)) ;
Roth, Morgane (Breeding Research group (Switzerland)) ;
Aranzana, Maria José (Centre de Recerca en Agrigenòmica) ;
Auwerkerken, Annemarie (Better3fruit N.V.) ;
Bink, Marco (Hendrix Genetics Research, Technology & Services (The Netherlands)) ;
Denancé, Caroline (Université d'Angers) ;
Dujak, Christian (Centre de Recerca en Agrigenòmica) ;
Durel, Charles-Eric (Université d'Angers) ;
Font i Forcada, Carolina (Institut de Recerca i Tecnologia Agroalimentàries) ;
Cantin, Celia M. (Institut de Recerca i Tecnologia Agroalimentàries) ;
Guerra, Walter (Research Centre Laimburg (Italy)) ;
Howard, Nicholas P. (University of Oldenburg) ;
Keller, Beat (Breeding Research group (Switzerland)) ;
Lewandowski, Mariusz (Research Institute of Horticulture (Poland)) ;
Ordidge, Matthew (University of Reading) ;
Rymenants, Marijn (Laboratory for Plant Genetics and Crop Improvement (Belgium)) ;
Sanin, Nadia (Research Centre Laimburg (Italy)) ;
Studer, Bruno (Institute of Agricultural Sciences (Switzerland)) ;
Zurawicz, Edward (Research Institute of Horticulture (Poland)) ;
Laurens, François (Université d'Angers) ;
Patocchi, Andrea (Breeding Research group (Switzerland)) ;
Muranty, Hélène (Université d'Angers)
Breeding of apple is a long-term and costly process due to the time and space requirements for screening selection candidates. Genomics-assisted breeding utilizes genomic and phenotypic information to increase the selection efficiency in breeding programs, and measurements of phenotypes in different environments can facilitate the application of the approach under various climatic conditions. [...]
2020 - 10.1038/s41438-020-00408-8
Horticulture research, Vol. 7 (November 2020) , art. 189
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11 p, 829.8 KB |
Pedigree analysis of 220 almond genotypes reveals two world mainstream breeding lines based on only three different cultivars
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Pérez de los Cobos, Felipe (Centre de Recerca en Agrigenòmica) ;
Martínez-García, Pedro J (Consejo Superior de Investigaciones Científicas. Centro de Edafología y Biología Aplicada del Segura) ;
Romero Aroca, Agusti Jordi (Institut de Recerca i Tecnologia Agroalimentàries) ;
Miarnau, Xavier (Institut de Recerca i Tecnologia Agroalimentàries) ;
Eduardo, Iban (Centre de Recerca en Agrigenòmica) ;
Howad, Werner (Centre de Recerca en Agrigenòmica) ;
Mnejja, Mourad (Centre de Recerca en Agrigenòmica) ;
Dicenta, Federico (Consejo Superior de Investigaciones Científicas. Centro de Edafología y Biología Aplicada del Segura) ;
Socias i Company, Rafel (Centro de Investigación y Tecnología Agroalimentaria de Aragón) ;
Rubio Cabetas, Maria J. (Centro de Investigación y Tecnología Agroalimentaria de Aragón) ;
Gradziel, Thomas M. (University of California) ;
Wirthensohn, Michelle (University of Adelaide. School of Agriculture, Food and Wine) ;
Duval, Henri (Institut National de la Recherche Agronomique (França)) ;
Holland, Doron (Agricultural Research Organization (Israel)) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ;
Vargas, Francisco J. (Institut de Recerca i Tecnologia Agroalimentàries) ;
Batlle, Ignasi (Institut de Recerca i Tecnologia Agroalimentàries)
Loss of genetic variability is an increasing challenge in tree breeding programs due to the repeated use of a reduced number of founder genotypes. However, in almond, little is known about the genetic variability in current breeding stocks, although several cases of inbreeding depression have been reported. [...]
2021 - 10.1038/s41438-020-00444-4
Horticulture research, Vol. 8 (January 2021) , art. 11
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