UAB Digital Repository of Documents 23 records found  1 - 10nextend  jump to record: Search took 0.00 seconds. 
1.
16 p, 5.1 MB Diverse Populations of Colonize the Skin of Healthy Dogs / Fábregas, Norma (Universitat Autònoma de Barcelona. Vetgenomics) ; Pérez, Daniel (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ; Viñes, Joaquim (Universitat Autònoma de Barcelona. Vetgenomics) ; Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ; Migura-Garcia, Lourdes (Unitat mixta d'investigació IRTA-UAB en Sanitat Animal. Centre de Recerca en Sanitat Animal) ; Ferrer i Caubet, Lluís (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ; Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM))
Staphylococcus pseudintermedius is a commensal bacterium of the canine skin but is also a key opportunistic pathogen that is responsible for most cases of pyoderma in dogs. The current paradigm indicates that infection arises when predisposing factors alter the healthy skin barrier. [...]
2023 - 10.1128/spectrum.03393-22
Microbiology Spectrum, Vol. 11 (february 2023)  
2.
11 p, 1.8 MB Clonal Spread and Intra- and Inter-Species Plasmid Dissemination Associated With Klebsiella pneumoniae Carbapenemase-Producing Enterobacterales During a Hospital Outbreak in Barcelona, Spain / Marí-Almirall, Marta (Hospital Clínic i Provincial de Barcelona) ; Ferrando, Núria (Hospital Clínic i Provincial de Barcelona) ; Fernández, Mariana José (Hospital Clínic i Provincial de Barcelona) ; Cosgaya, Clara (Hospital Clínic i Provincial de Barcelona) ; Viñes, Joaquim (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Rubio, Elisa (Hospital Clínic i Provincial de Barcelona) ; Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ; Muñoz, Laura (Hospital Clínic i Provincial de Barcelona) ; Pellice, Martina (Hospital Clínic i Provincial de Barcelona) ; Vergara, Andrea (Hospital Clínic i Provincial de Barcelona) ; Campo, Irene (Hospital Clínic i Provincial de Barcelona) ; Rodríguez-Serna, Laura (Hospital Clínic i Provincial de Barcelona) ; Santana, Gemina (Hospital Clínic i Provincial de Barcelona) ; Del Río, Ana (Hospital Clínic i Provincial de Barcelona) ; Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Ciruela, Pilar (Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública) ; Ballester, Frederic (Hospital Universitari Sant Joan de Reus (Tarragona)) ; Marco, Francesc (Hospital Clínic i Provincial de Barcelona) ; Martínez, José Antonio (Hospital Clínic i Provincial de Barcelona) ; Soriano, Álex (Hospital Clínic i Provincial de Barcelona) ; Pitart, Cristina (Hospital Clínic i Provincial de Barcelona) ; Vila Estapé, Jordi (Hospital Clínic i Provincial de Barcelona) ; Roca, Ignasi (Hospital Clínic i Provincial de Barcelona)
Objectives: The study aimed to characterize the clonal spread of resistant bacteria and dissemination of resistance plasmids among carbapenem-resistant Enterobacterales at a tertiary hospital in Catalonia, Spain. [...]
2021 - 10.3389/fmicb.2021.781127
Frontiers in microbiology, Vol. 12 (november 2021)  
3.
15 p, 2.2 MB Novel canine high-quality metagenome-assembled genomes, prophages and host-associated plasmids provided by long-read metagenomics together with Hi-C proximity ligation / Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ; Pérez, Daniel (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Viñes, Joaquim (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Fábregas, Norma (Universitat Autònoma de Barcelona. Vetgenomics) ; Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM))
The human gut microbiome has been extensively studied, yet the canine gut microbiome is still largely unknown. The availability of high-quality genomes is essential in the fields of veterinary medicine and nutrition to unravel the biological role of key microbial members in the canine gut environment. [...]
2022 - 10.1099/mgen.0.000802
Microbial Genomics, Vol. 8 (march 2022)  
4.
15 p, 2.7 MB Concordance between Antimicrobial Resistance Phenotype and Genotype of Staphylococcus pseudintermedius from Healthy Dogs / Viñes, Joaquim (Universitat Autònoma de Barcelona. Vetgenomics) ; Fábregas, Norma (Universitat Autònoma de Barcelona. Vetgenomics) ; Pérez, Daniel (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ; Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ; Fonticoba, Rocío (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ; Francino, Olga (Universitat Autònoma de Barcelona. Vetgenomics) ; Ferrer i Caubet, Lluís (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ; Migura-Garcia, Lourdes (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal)
Staphylococcus pseudintermedius, a common commensal canine bacterium, is the main cause of skin infections in dogs and is a potential zoonotic pathogen. The emergence of methicillin-resistant S. pseudintermedius (MRSP) has compromised the treatment of infections caused by these bacteria. [...]
2022 - 10.3390/antibiotics11111625
Antibiotics, Vol. 11 (november 2022)  
5.
4 p, 292.7 KB Whole-Genome Sequencing and De Novo Assembly of 67 Strains Isolated from the Skin of Healthy Dogs / Fábregas, Norma (Universitat Autònoma de Barcelona. Vetgenomics) ; Pérez, Daniel (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ; Viñes, Joaquim (Universitat Autònoma de Barcelona. Vetgenomics) ; Fonticoba, Rocío (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ; Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ; Migura-Garcia, Lourdes (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal) ; Ferrer i Caubet, Lluís (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ; Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM))
We have de novo assembled 67 genomes, with median values of 2. 6 Mbp size and 99. 43% completeness, 2,386 coding sequences, 19 complete rRNAs, 59 tRNAs, and 4 noncoding RNAs. We released 51 single-contig complete genomes and 16 genomes with a circular main contig using Nanopore sequencing.
2022 - 10.1128/mra.00039-22
Microbiology Resource Announcements, Vol. 11 (march 2022)  
6.
215 p, 13.0 MB From the clinic to the farm : Applying sequencing and de novo assembly to characterize One-Health bacterial pathogens / Viñes, Joaquim ; Francino, Olga, dir. ; Cuscó, Anna ; Sánchez Bonastre, Armando, dir.
Les infeccions causades per bacteris resistents a múltiples antibiòtics son una amenaça tant per a la salut animal com la humana degut a la limitació en el tractament, la qual pot portar a complicacions clíniques severes, estades hospitalàries més llargues o, fins i tot, a la mort. [...]
Las infecciones causadas por bacterias resistentes a múltiples antibióticos son una amenaza tanto para la salud animal como la humana debido a la limitación en el tratamiento, la cual puede conllevar complicaciones clínicas severas, estancias hospitalarias más largar o incluso la muerte. [...]
Multi-drug resistant bacteria infections are a threat to animal and human health due to the limitation in treatment, which can lead to severe clinical complications, longer hospital stays, or even death. [...]

2021  
7.
15 p, 2.4 MB Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces / Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ; Pérez, Daniel (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Viñes, Joaquim (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Fábregas, Norma (Universitat Autònoma de Barcelona. Vetgenomics) ; Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM))
Long-read sequencing in metagenomics facilitates the assembly of complete genomes out of complex microbial communities. These genomes include essential biologic information such as the ribosomal genes or the mobile genetic elements, which are usually missed with short-reads. [...]
2021 - 10.1186/s12864-021-07607-0
BMC genomics, Vol. 22 (may 2021)  
8.
20 p, 9.0 MB The microbiota of water buffalo milk during mastitis / Catozzi, Carlotta (Università degli Studi di Milano. Dipartimento di Medicina Veterinaria) ; Sánchez Bonastre, Armando (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Lecchi, Cristina (Università degli Studi di Milano. Dipartimento di Medicina Veterinaria) ; De Carlo, Esterina (Istituto Zooprofilattico Sperimentale del Mezzogiorno. National Reference Centre for Hygiene and Technologies of Water Buffalo Farming and Productions) ; Vecchio, Domenico (Istituto Zooprofilattico Sperimentale del Mezzogiorno. National Reference Centre for Hygiene and Technologies of Water Buffalo Farming and Productions) ; Martucciello, Alessandra (Istituto Zooprofilattico Sperimentale del Mezzogiorno. National Reference Centre for Hygiene and Technologies of Water Buffalo Farming and Productions) ; Fraulo, Pasquale (Istituto Zooprofilattico Sperimentale del Mezzogiorno. National Reference Centre for Hygiene and Technologies of Water Buffalo Farming and Productions) ; Bronzo, Valerio (Università degli Studi di Milano. Dipartimento di Medicina Veterinaria) ; Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ; D'Andreano, Sara (Universitat Autònoma de Barcelona. Vetgenomics) ; Ceciliani, Fabrizio (Università degli Studi di Milano. Dipartimento di Medicina Veterinaria)
The aim of this study was to define the microbiota of water buffalo milk during sub-clinical and clinical mastitis, as compared to healthy status, by using high-throughput sequencing of the 16S rRNA gene. [...]
2017 - 10.1371/journal.pone.0184710
PloS one, Vol. 12 (september 2017)  
9.
2 p, 1.1 MB Corrigendum : Individual Signatures Define Canine Skin Microbiota Composition and Variability / Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ; Sánchez Bonastre, Armando (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Altet Sanahujes, Laura (Universitat Autònoma de Barcelona. Vetgenomics) ; Ferrer i Caubet, Lluís (Tufts University. Department of Clinical Sciences) ; Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM))
2017 - 10.3389/fvets.2017.00119
Frontiers in Veterinary Science, Vol. 4 (july 2017)  
10.
22 p, 4.3 MB Digestive microbiota is different in pigs receiving antimicrobials or a feed additive during the nursery period / Soler, Cassandra (Universitat de Lleida. Departament de Ciència Animal) ; Goossens, Tim (Nutriad International N.V., Dendermonde, Belgium) ; Bermejo, Alvaro (Nutriad International N.V., Dendermonde, Belgium) ; Migura-Garcia, Lourdes (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal) ; Cuscó, Anna (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ; Fraile, Lorenzo (Universitat de Lleida. Departament de Ciència Animal)
Antimicrobials have been used in a prophylactic way to decrease the incidence of digestive disorders during the piglet post-weaning period. Nowadays, it is urgent to reduce their consumption in livestock to address the problem of antimicrobial resistance. [...]
2018 - 10.1371/journal.pone.0197353
PloS one, Vol. 13 (may 2018)  

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