UAB Digital Repository of Documents 39 records found  1 - 10nextend  jump to record: Search took 0.00 seconds. 
1.
12 p, 2.8 MB Genome-wide patterns of homozygosity provide clues about the population history and adaptation of goats / Bertolini, Francesca (Iowa State University. Department of Animal Science) ; Cardoso, Tainã Figueiredo (Centre de Recerca en Agrigenòmica) ; Marras, Gabriele (Fondazione Parco Tecnologico Padano) ; Nicolazzi, Ezequiel L. (Fondazione Parco Tecnologico Padano (PTP)) ; Rothschild, Max F. (Iowa State University. Department of Animal Science) ; Amills i Eras, Marcel (Centre de Recerca en Agrigenòmica)
Background: Patterns of homozygosity can be influenced by several factors, such as demography, recombination, and selection. Using the goat SNP50 BeadChip, we genotyped 3171 goats belonging to 117 populations with a worldwide distribution. [...]
2018 - 10.1186/s12711-018-0424-8
Genetics selection evolution, Vol. 50 (2018) , art. 59  
2.
22 p, 4.8 MB Comparative analysis of tissue-specific transcriptomes in the funnel-web spider Macrothele calpeiana (Araneae, Hexathelidae) / Frías López, Cristina (Universitat de Barcelona. Departament de Biologia Animal) ; Almeida, Francisca C. (Universitat de Barcelona. Departament de Biologia Animal) ; Guirao-Rico, Sara (Centre de Recerca en Agrigenòmica) ; Vizueta, Joel (Universitat de Barcelona. Departament de Genètica, Microbiologia i Estadística) ; Sánchez-Gracia, Alejandro (Universitat de Barcelona. Departament de Genètica, Microbiologia i Estadística) ; Arnedo, Miquel A. (Universitat de Barcelona. Departament de Biologia Animal) ; Rozas, Julio (Universitat de Barcelona. Departament de Genètica, Microbiologia i Estadística)
The funnel-web spider Macrothele calpeiana is a charismatic Mygalomorph with a great interest in basic, applied and translational research. Nevertheless, current scarcity of genomic and transcriptomic data of this species clearly limits the research in this non-model organism. [...]
2015 - 10.7717/peerj.1064
PeerJ, Vol. 3 (June 2015) , art. e1064  
3.
12 p, 2.1 MB Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies / Jung, Sook (Washington State University. Department of Horticulture and Landscape Architecture) ; Cestaro, Alessandro (Fondazione Edmund Mach. Istituto agrario di San Michele all'Adige) ; Troggio, Michela (Fondazione Edmund Mach. Istituto agrario di San Michele all'Adige) ; Main, Dorrie (Washington State University. Department of Horticulture and Landscape Architecture) ; Zheng, Ping (Washington State University. Department of Horticulture and Landscape Architecture) ; Cho, Ilhyung (Saginaw Valley State University. Department of Computer Science and Information Systems) ; Folta, Kevin M. (University of Florida. Horticultural Sciences Department) ; Sosinski, Bryon (North Carolina State University. Department of Horticultural Science) ; Abbott, Albert (Clemson University. Department of Genetics and Biochemistry) ; Celton, Jean-Marc (Institut national de la recherche agronomique (França). UMR Génétique et Horticulture) ; Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ; Shulaev, Vladimir (University of North Texas. Department of Biological Sciences) ; Verde, Ignazio (Centro di Ricerca per la Frutticoltura) ; Morgante, Michele (Istituto di Genomica Applicata (Udine, Itàlia)) ; Rokhsar, Daniel (United States. Department of Energy. Joint Genome Institute) ; Velasco, Riccardo (Fondazione Edmund Mach. Istituto agrario di San Michele all'Adige) ; Sargent, Daniel James (Fondazione Edmund Mach. Istituto agrario di San Michele all'Adige)
Background: Rosaceae include numerous economically important and morphologically diverse species. Comparative mapping between the member species in Rosaceae have indicated some level of synteny. Recently the whole genome of three crop species, peach, apple and strawberry, which belong to different genera of the Rosaceae family, have been sequenced, allowing in-depth comparison of these genomes. [...]
2012 - 10.1186/1471-2164-13-129
BMC genomics, Vol. 13 (April 2012) , art. 129  
4.
14 p, 627.9 KB Genetic variation in pan species is shaped by demographic history and harbors lineage-specific functions / Han, Sojung (Institut de Biologia Evolutiva) ; Andrés, Aida M. (UCL Genetics Institute) ; Marquès i Bonet, Tomàs, 1975- (Institut Català de Paleontologia Miquel Crusafont) ; Kuhlwilm, Martin (Institut de Biologia Evolutiva) ; Universitat Autònoma de Barcelona
Chimpanzees (Pan troglodytes) and bonobos (Pan paniscus) are the closest living relatives of humans, but the two species show distinct behavioral and physiological differences, particularly regarding female reproduction. [...]
2019 - 10.1093/gbe/evz047
Genome biology and evolution, Vol. 11, Issue 4 (April 2019) , p. 1178-1191  
5.
7 p, 990.3 KB Rapid genome resequencing of an atoxigenic strain of Aspergillus carbonarius / Cabañes Sáenz, Francisco Javier (Universitat Autònoma de Barcelona. Departament de Sanitat i d'Anatomia Animals) ; Sanseverino, Walter (Sequentia Biotech SL) ; Castellà Gómez, Gemma (Universitat Autònoma de Barcelona. Departament de Sanitat i d'Anatomia Animals) ; Bragulat, M. Rosa (Universitat Autònoma de Barcelona. Departament de Sanitat i d'Anatomia Animals) ; Cigliano, Riccardo Aiese (Sequentia Biotech SL) ; Sánchez Bonastre, Armando (Centre de Recerca en Agrigenòmica)
In microorganisms, Ion Torrent sequencing technology has been proved to be useful in whole-genome sequencing of bacterial genomes (5 Mbp). In our study, for the first time we used this technology to perform a resequencing approach in a whole fungal genome (36 Mbp), a non-ochratoxin A producing strain of Aspergillus carbonarius. [...]
2015 - 10.1038/srep09086
Scientific reports, Vol. 5 (2015) , art. 9086  
6.
1 p, 1.1 MB CRISPR : the genetic engineering revolution / Saldo Rubio, Guillem ; Universitat Autònoma de Barcelona. Facultat de Biociències
2018
Graduat o Graduada en Biotecnologia [815]  
7.
18 p, 2.3 MB The genomic footprints of the fall and recovery of the crested ibis / Feng, Sahaohong (University of Chinese Academy of Sciences) ; Fang, Qui (China National GeneBank) ; Barnett, Ross (Københavns Universitet. Sektion for GeoGenetik) ; Li, Cai (China National GeneBank) ; Han, Sojung (Institute of Evolutionary Biology) ; Kuhlwilm, Martin (Institute of Evolutionary Biology) ; Zhou, Long (China National GeneBank) ; Pan, Hailin (China National GeneBank) ; Deng, Yuan (China National GeneBank) ; Chen, Guangji (University of Chinese Academy of Sciences) ; Gamauf, Anita (Naturhistorisches Museum Wien) ; Woog, Friederike (Staatliches Museum für Naturkunde) ; Prys-Jones, Robert (The Natural History Museum) ; Marquès i Bonet, Tomàs, 1975- (Institut Català de Paleontologia Miquel Crusafont) ; P.Gilbert, M. Thomas (Københavns Universitet. Sektion for GeoGenetik) ; Zhang, Guojie (China National GeneBank)
Human-induced environmental change and habitat fragmentation pose major threats to biodiversity and require active conservation efforts to mitigate their consequences. Genetic rescue through translocation and the introduction of variation into imperiled populations has been argued as a powerful means to preserve, or even increase, the genetic diversity and evolutionary potential of endangered species [1, 2, 3, 4]. [...]
2019 - 10.1016/j.cub.2018.12.008
Current biology, Vol. 29, issue 2 (Jan. 2019) , p. 340-349  
8.
12 p, 1.7 MB Giant tortoise genomes provide insights into longevity and age-related disease / Quesada, Víctor (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Freitas Rodríguez, Sandra (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Miller, Joshua (Yale University. Department of Ecology and Evolutionary Biology) ; Pérez-Silva, José G. (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Jiang, Zi-Feng (The University of Chicago. Institute for Genomics and Systems Biology) ; Tapia, Washington (Galapagos Islands. Galapagos National Park Directorate) ; Santiago-Fernández, Olaya (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Campos-Iglesias, Diana (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Kuderna, Lukas F. K. (Institute of Evolutionary Biology (UPF-CSIC)) ; Quinzin, Maud (Yale University. Department of Ecology and Evolutionary Biology) ; Álvarez, Miguel G. (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Carrero, Dido (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Beheregaray, Luciano B. (Flinders University. College of Science and Engineering) ; Gibbs, James P. (State University of New York. College of Environmental Science and Forestry) ; Chiari, Ylenia (University of South Alabama. Department of Biology) ; Glaberman, Scott (University of South Alabama. Department of Biology) ; Ciofi, Claudio (University of Florence. Department of Biology) ; Araujo-Voces, Miguel (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Mayoral, Pablo (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Arango, Javier R. (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Tamargo-Gómez, Isaac (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Roiz-Valle, David (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Pascual-Torner, María (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Evans, Benjamin R. (Yale University. Department of Ecology and Evolutionary Biology) ; Edwards, Danielle L. (University of California. School of Natural Sciences) ; Garrick, Ryan C. (University of Mississippi. Department of Biology) ; Russello, Michael A. (The University of British Columbia. Department of Biology) ; Poulakakis, Nikos (University of Crete. Department of Biology) ; Gaughran, Stephen J. (Yale University. Department of Ecology and Evolutionary Biology) ; Rueda, Danny O. (Galapagos Islands. Galapagos National Park Directorate) ; Bretones, Gabriel (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular) ; Marquès i Bonet, Tomàs, 1975- (Institut Català de Paleontologia Miquel Crusafont) ; White, Kevin P. (The University of Chicago. Institute for Genomics and Systems Biology) ; Caccone, Adalgisa (Yale University. Department of Ecology and Evolutionary Biology) ; López-Otín, Carlos (Universidad de Oviedo. Departamento de Bioquímica y Biología Molecular)
Giant tortoises are among the longest-lived vertebrate animals and, as such, provide an excellent model to study traits like longevity and age-related diseases. However, genomic and molecular evolutionary information on giant tortoises is scarce. [...]
2018 - 10.1038/s41559-018-0733-x
Nature ecology and evolution, (December 2018)  
9.
7 p, 976.0 KB Rapid genome resequencing of an atoxigenic strain of Aspergillus carbonarius / Cabañes Sáenz, Francisco Javier (Universitat Autònoma de Barcelona. Departament de Sanitat i d'Anatomia Animals) ; Castellà Gómez, Gemma (Universitat Autònoma de Barcelona. Departament de Sanitat i d'Anatomia Animals) ; Bragulat, M. Rosa (Universitat Autònoma de Barcelona. Departament de Sanitat i d'Anatomia Animals) ; Sanseverino, Walter (Centre de Recerca en Agrigenòmica) ; Sánchez, Armand (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular) ; Aiese-Cigliano, Riccardo (Sequentia Biotech SL)
In microorganisms, Ion Torrent sequencing technology has been proved to be useful in whole-genome sequencing of bacterial genomes (5 Mbp). In our study, for the first time we used this technology to perform a resequencing approach in a whole fungal genome (36 Mbp), a non-ochratoxin A producing strain of Aspergillus carbonarius. [...]
2015
Scientific Reports, Març 2015, p. 1-7  
10.
33 p, 1.5 MB Molecular Population Genetics / Casillas Viladerrams, Sònia (Universitat Autònoma de Barcelona. Departament de Genètica i Microbiologia) ; Barbadilla Prados, Antonio (Universitat Autònoma de Barcelona. Departament de Genètica i Microbiologia) ; Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí"
Molecular population genetics aims to explain genetic variation and molecular evolution from population genetics principles. The field was born 50 years ago with the first measures of genetic variation in allozyme loci, continued with the nucleotide sequencing era, and is currently in the era of population genomics. [...]
2017 - 10.1534/genetics.116.196493
Genetics, Vol. 205, Issue 3 (March 2017) , p. 1003-1035  

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