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18 p, 4.0 MB |
Targeting OGG1 arrests cancer cell proliferation by inducing replication stress
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Visnes, T. (Sintef Industry. Department of Biotechnology and Nanomedicine) ;
Benítez-Buelga, Carlos (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Cázares-Körner, A. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Sanjiv, K. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Hanna, Bishoy (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Mortusewicz, O. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Rajagopal, Veera M (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Albers, J. J. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Hagey, D. W. (Karolinska Institutet (Estocolm, Suècia). Department of Laboratory Medicine) ;
Bekkhus, T. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Eshtad, S. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Baquero, Juan Miguel (Centro Nacional de Investigaciones Oncológicas) ;
Masuyer, G. (University of Bath. Department of Pharmacy and Pharmacology) ;
Wallner, O. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Müller, S. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Pham, T. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Göktürk, C. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Rasti, A. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Suman, S. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Torres, Raul (Institut Germans Trias i Pujol. Institut de Recerca contra la Leucèmia Josep Carreras) ;
Sarno, A. (Sintef Ocean. Department of Environment and New Resources) ;
Wiita, E. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Homan, E. J. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Karsten, S. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Marimuthu, K. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Michel, M. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Koolmeister, T. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Scobie, M. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Loseva, O. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Almlöf, I. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Unterlass, J. E. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Pettke, A. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Boström, J. (Karolinska Institutet (Estocolm, Suècia). Department of Laboratory Medicine) ;
Pandey, M. (University of Sheffield. Weston Park Cancer Centre) ;
Gad, H. (University of Sheffield. Weston Park Cancer Centre) ;
Herr, P. (University of Sheffield. Weston Park Cancer Centre) ;
Jemth, A. S. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
El Andaloussi, S. (Karolinska Institutet (Estocolm, Suècia). Department of Laboratory Medicine) ;
Kalderén, C. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Rodriguez-Perales, Sandra (Centro Nacional de Investigaciones Oncológicas) ;
Benítez, J. (Centro de Investigación Biomédica en Red de Enfermedades Raras) ;
Krokan, H. E. (Research and Innovation in Central Norway) ;
Altun, M. (Karolinska Institutet (Estocolm, Suècia). Department of Laboratory Medicine) ;
Stenmark, P. (Lund University. Department of Experimental Medical Science.) ;
Berglund, U. W. (Karolinska Institutet (Estocolm, Suècia). Department of Oncology and Pathology) ;
Helleday, Thomas (University of Sheffield.Weston Park Cancer Centre) ;
Universitat Autònoma de Barcelona
Altered oncogene expression in cancer cells causes loss of redox homeostasis resulting in oxidative DNA damage, e. g. 8-oxoguanine (8-oxoG), repaired by base excision repair (BER). PARP1 coordinates BER and relies on the upstream 8-oxoguanine-DNA glycosylase (OGG1) to recognise and excise 8-oxoG. [...]
2021 -  10.1093/nar/gkaa1048
Nucleic acids research, Vol. 48 Núm. 21 (february 2021) , p. 12234-12251
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25 p, 3.6 MB |
Methylation regulation of Antiviral host factors, Interferon Stimulated Genes (ISGs) and T-cell responses associated with natural HIV control
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Oriol-Tordera, Bruna (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Berdasco, Maria (Institut Germans Trias i Pujol. Institut de Recerca contra la Leucèmia Josep Carreras) ;
Llano Montero, Anuska (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Mothe, Beatriz (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Gálvez, Cristina (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Martínez Picado, Francisco Javier (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Carrillo, Jorge (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Blanco, Julià (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Duran-Castells, Clara (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Ganoza, C. (Alberto Hurtado School of Medicine. Universidad Peruana Cayetano Heredia) ;
Sanchez, J. (Centro de Investigaciones Tecnológicas. Biomédicas y Medioambientales. CITBM) ;
Pérez-Álvarez, Núria (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Calle, M. Luz (Universitat de Vic - Universitat Central de Catalunya) ;
Sánchez, Alex (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Esteller, M. (Institut Germans Trias i Pujol. Institut de Recerca contra la Leucèmia Josep Carreras) ;
Brander, Christian (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Ruiz Riol, Marta (Institut Germans Trias i Pujol. Institut de Recerca de la Sida IrsiCaixa) ;
Universitat Autònoma de Barcelona
GWAS, immune analyses and biomarker screenings have identified host factors associated with in vivo HIV-1 control. However, there is a gap in the knowledge about the mechanisms that regulate the expression of such host factors. [...]
2020 - 10.1371/JOURNAL.PPAT.1008678
PLOS pathogens, Vol. 16 Núm. 8 (june 2020) , p. e1008678
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19 p, 3.0 MB |
Nucleotide depletion reveals the impaired ribosome biogenesis checkpoint as a barrier against damage
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Pelletier, Joffrey (Institut d'Investigació Biomèdica de Bellvitge) ;
Riaño-Canalias, Ferran (Institut d'Investigació Biomèdica de Bellvitge) ;
Almacellas, Eugènia (Institut d'Investigació Biomèdica de Bellvitge) ;
Mauvezin, Caroline (Institut d'Investigació Biomèdica de Bellvitge) ;
Samino, Sara (Universitat Rovira i Virgili) ;
Feu, Sonia (Universitat de Barcelona) ;
Menoyo, Sandra (Institut d'Investigació Biomèdica de Bellvitge) ;
Domostegui, Ana (Institut d'Investigació Biomèdica de Bellvitge) ;
Garcia-Cajide, Marta (Institut d'Investigació Biomèdica de Bellvitge) ;
Salazar, Ramon (Institut Català d'Oncologia) ;
Cortes Crignola, Constanza (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Marcos Dauder, Ricardo (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Tauler, Albert (Universitat de Barcelona) ;
Yanes, Oscar (Universitat Rovira i Virgili) ;
Agell, Neus (Universitat de Barcelona) ;
Kozma, Sara C. (Institut d'Investigació Biomèdica de Bellvitge) ;
Gentilella, Antonio (Universitat de Barcelona) ;
Thomas, George (Universitat de Barcelona)
Many oncogenes enhance nucleotide usage to increase ribosome content, replication, and cell proliferation, but in parallel trigger p53 activation. Both the impaired ribosome biogenesis checkpoint () and the damage response () have been implicated in p53 activation following nucleotide depletion. [...]
2020 - 10.15252/embj.2019103838
EMBO Journal, Vol. 39 (june 2020)
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38 p, 5.4 MB |
Differences in firing efficiency, chromatin and transcription underlie the developmental plasticity of the Arabidopsis DNA replication origins
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Sequeira-Mendes, Joana (Centro de Biología Molecular Severo Ochoa) ;
Vergara, Zaida (Centro de Biología Molecular Severo Ochoa) ;
Peiró, Ramón (Centro de Biología Molecular Severo Ochoa) ;
Morata, Jordi (Centre de Recerca en Agrigenòmica) ;
Aragüez, Irene (Centro de Biología Molecular Severo Ochoa) ;
Costas, Celina (Centro de Biología Molecular Severo Ochoa) ;
Méndez Giráldez, Raúl (Centro de Biología Molecular Severo Ochoa) ;
Casacuberta i Suñer, Josep M. 1962- (Centre de Recerca en Agrigenòmica) ;
Bastolla, Ugo (Centro de Biología Molecular Severo Ochoa) ;
Gutiérrez, Crisanto (Centro de Biología Molecular Severo Ochoa)
Eukaryotic genome replication depends on thousands of DNA replication origins (ORIs). A major challenge is to learn ORI biology in multicellular organisms in the context of growing organs to understand their developmental plasticity. [...]
2019 - 10.1101/gr.240986.118
Genome research, Vol. 29, Issue 5 (May 2019) , p. 784-797
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47 p, 1.4 MB |
The circadian clock sets the time of DNA replication licensing to regulate growth in Arabidopsis
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Fung Uceda, Jorge Alberto (Centre de Recerca en Agrigenòmica) ;
Lee, Kyounghee (Sungkyunkwan University. Department of Biological Sciences) ;
Seo, Pil Joon (Sungkyunkwan University. Department of Biological Sciences) ;
Polyn, Stefanie (Universiteit Gent. Department of Plant Biotechnology and Bioinformatics) ;
De Veylder, Lieven (Universiteit Gent. Department of Plant Biotechnology and Bioinformatics) ;
Mas, Paloma (Centre de Recerca en Agrigenòmica)
The circadian clock and cell cycle as separate pathways have been well documented in plants. Elucidating whether these two oscillators are connected is critical for understanding plant growth. We found that a slow-running circadian clock decelerates the cell cycle and, conversely, a fast clock speeds it up. [...]
2018 - 10.1016/j.devcel.2018.02.022
Developmental Cell, Vol. 45, issue 1 (April 2018) , p. 101-113
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11 p, 1.4 MB |
Retrotransposons are specified as DNA replication origins in the gene-poor regions of Arabidopsis heterochromatin
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Vergara, Zaida (Centro de Biología Molecular Severo Ochoa) ;
Sequeira-Mendes, Joana (Centro de Biología Molecular Severo Ochoa) ;
Morata, Jordi (Centre de Recerca en Agrigenòmica) ;
Peiró, Ramón (Centro de Biología Molecular Severo Ochoa) ;
Hénaff, Elizabeth (Centre de Recerca en Agrigenòmica) ;
Costas, Celina (Centro de Biología Molecular Severo Ochoa) ;
Casacuberta i Suñer, Josep M. 1962- (Centre de Recerca en Agrigenòmica) ;
Gutiérrez, Crisanto (Centro de Biología Molecular Severo Ochoa)
Genomic stability depends on faithful genome replication. This is achieved by the concerted activity of thousands of DNA replication origins (ORIs) scattered throughout the genome. The DNA and chromatin features determining ORI specification are not presently known. [...]
2017 - 10.1093/nar/gkx524
Nucleic acids research, Vol. 45, issue 14 (Aug. 2017) , p. 8358-8368
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10 p, 1.3 MB |
Altering the Ad5 packaging domain affects the maturation of the ad particles
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Alba Fernández, Raúl (Universitat Autònoma de Barcelona. Centre de Biotecnologia Animal i de Teràpia Gènica (CBATEG)) ;
Cots i Rabella, Dan (Universitat Autònoma de Barcelona. Centre de Biotecnologia Animal i de Teràpia Gènica (CBATEG)) ;
Ostapchuk, Philomena (Stony Brook University. Department of Molecular Genetics and Microbiology (Nova York, Estats Units d'Amèrica)) ;
Bosch i Merino, Assumpció (Universitat Autònoma de Barcelona. Departament de Bioquímica i de Biologia Molecular) ;
Hearing, Patrick (Stony Brook University. Department of Molecular Genetics and Microbiology (Nova York, Estats Units d'Amèrica)) ;
Chillón Rodríguez, Miguel (Universitat Autònoma de Barcelona. Centre de Biotecnologia Animal i de Teràpia Gènica (CBATEG))
We have previously described a new family of mutant adenoviruses carrying different combinations of attB/attP sequences from bacteriophage PhiC31 flanking the Ad5 packaging domain. These novel helper viruses have a significantly delayed viral life cycle and a severe packaging impairment, regardless of the presence of PhiC31 recombinase. [...]
2011 - 10.1371/journal.pone.0019564
PloS one, Vol. 6, Issue 5 (May 2011) , p. e19564
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