|
1.
|
|
14 p, 1.9 MB |
Characterization of Seminal Microbiome of Infertile Idiopathic Patients Using Third-Generation Sequencing Platform
/
Garcia Segura, Sergio (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia) ;
Del Rey Azpiri, Javier (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia) ;
Closa, Laia (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
García-Martinez, Iris (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Hobeich, Carlos (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Castel, Ana Belén (Instituto de Fertilidad) ;
Vidal, Francisco (Hospital Universitari Vall d'Hebron. Institut de Recerca) ;
Benet i Català, Jordi (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia) ;
Oliver Bonet, Maria (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia)
Since the first description of a commensal seminal microbiome using sequencing, less than a decade ago, interest in the composition of this microbiome and its relationship with fertility has been growing. [...]
2023 -  10.3390/ijms24097867
International journal of molecular sciences, Vol. 24, Issue 9 (May 2023) , art. 7867
|
|
|
2.
|
|
12 p, 1.3 MB |
Real-time genomics for One Health
/
Urban, Lara (Helmholtz Zentrum Muenchen) ;
Perlas Puente, Albert (Helmholtz Zentrum Muenchen) ;
Francino, Olga (Nano1Health, S.L.) ;
Martí-Carreras, Joan (Nano1Health, S.L.) ;
Muga, Brenda (University of Otago. Department of Anatomy) ;
Mwangi, Jenniffer W. (Machakos University. Biological Department) ;
Okalebo, Laura Boykin (BioTeam, Inc. (USA)) ;
Stanton, Jo-Ann (University of Otago. Department of Anatomy) ;
Black, Amanda (Lincoln University. Bioprotection Aotearoa) ;
Waipara, Nick (Plant and Food Research (New Zealand)) ;
Fontsere, Claudia (University of Copenhagen. The Globe Institute. Center for Evolutionary Hologenomics) ;
Eccles, David (Malaghan Institute of Medical Research. Hugh Green Cytometry Centre) ;
Urel, Harika (Helmholtz Zentrum Muenchen) ;
Reska, Tim (Helmholtz Zentrum Muenchen) ;
Morales, Hernan (University of Copenhagen. The Globe Institute. Center for Evolutionary Hologenomics) ;
Palmada-Flores, Marc (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ;
Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont) ;
Watsa, Mrinalini (San Diego Zoo Wildlife Alliance) ;
Libke, Zane (Instituto Nacional de Biodiversidad (Ecuador)) ;
Erkenswick, Gideon (Field Projects International (USA)) ;
van Oosterhout, Cock (University of East Anglia)
The ongoing degradation of natural systems and other environmental changes has put our society at a crossroad with respect to our future relationship with our planet. While the concept of One Health describes how human health is inextricably linked with environmental health, many of these complex interdependencies are still not well-understood. [...]
2023 - 10.15252/msb.202311686
Molecular systems biology, Vol. 19, Issue 6 (June 2023) , art. e11686
|
|
|
3.
|
|
14 p, 3.5 MB |
The fecal bacterial microbiome of the Kuhl's pipistrelle bat (Pipistrellus kuhlii) reflects landscape anthropogenic pressure
/
Lobato-Bailón, Lourdes (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
García-Ulloa, Manuel (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Santos, Andrés (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Guixé, David (Centre de Ciència i Tecnologia Forestal de Catalunya) ;
Camprodon, Jordi (Universitat de Vic - Universitat Central de Catalunya) ;
Florensa-Rius, Xavier (Centre de Ciència i Tecnologia Forestal de Catalunya) ;
Molleda, Raúl (Asociación Naturalista MUR) ;
Manzano, Robert (Centre de Ciència i Tecnologia Forestal de Catalunya) ;
Puig Ribas, Maria (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Espunyes, Johan (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Dias-Alves, Andrea (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Marco, Ignasi (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Migura-Garcia, Lourdes (Unitat mixta d'investigació IRTA-UAB en Sanitat Animal. Centre de Recerca en Sanitat Animal) ;
Martinez-Urtaza, Jaime (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Cabezón Ponsoda, Óscar (Unitat mixta d'investigació IRTA-UAB en Sanitat Animal. Centre de Recerca en Sanitat Animal)
Anthropogenic disturbance has the potential to negatively affect wildlife health by altering food availability and diet composition, increasing the exposure to agrochemicals, and intensifying the contact with humans, domestic animals, and their pathogens. [...]
2023 - 10.1186/s42523-023-00229-9
Animal Microbiome, Vol. 5 (february 2023)
|
|
|
4.
|
|
15 p, 2.7 MB |
Concordance between Antimicrobial Resistance Phenotype and Genotype of Staphylococcus pseudintermedius from Healthy Dogs
/
Viñes, Joaquim (Universitat Autònoma de Barcelona. Vetgenomics) ;
Fábregas, Norma (Universitat Autònoma de Barcelona. Vetgenomics) ;
Pérez, Daniel (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ;
Fonticoba, Rocío (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Francino, Olga (Universitat Autònoma de Barcelona. Vetgenomics) ;
Ferrer i Caubet, Lluís (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Migura-Garcia, Lourdes (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal)
Staphylococcus pseudintermedius, a common commensal canine bacterium, is the main cause of skin infections in dogs and is a potential zoonotic pathogen. The emergence of methicillin-resistant S. pseudintermedius (MRSP) has compromised the treatment of infections caused by these bacteria. [...]
2022 - 10.3390/antibiotics11111625
Antibiotics, Vol. 11 (november 2022)
|
|
|
5.
|
|
13 p, 1.4 MB |
Identification of Leishmania infantum Epidemiology, Drug Resistance and Pathogenicity Biomarkers with Nanopore Sequencing
/
Martí-Carreras, Joan (Nano1Health S.L.) ;
Carrasco, Marina (Nano1Health S.L.) ;
Gómez-Ponce, Marcel (Nano1Health S.L.) ;
Noguera-Julian, Marc (Nano1Health S.L.) ;
Fisa, Roser (Universitat de Barcelona. Departament de Biologia, Sanitat i Medi Ambient) ;
Riera, Cristina (Universitat de Barcelona. Departament de Biologia, Sanitat i Medi Ambient) ;
Alcover, M. Magdalena (Universitat de Barcelona. Departament de Biologia, Sanitat i Medi Ambient) ;
Roura, Xavier (Universitat Autònoma de Barcelona. Hospital Clínic Veterinari) ;
Ferrer i Caubet, Lluís (Universitat Autònoma de Barcelona. Departament de Medicina i Cirurgia Animals) ;
Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM))
The emergence of drug-resistant strains of the parasite Leishmania infantum infecting dogs and humans represents an increasing threat. L. infantum genomes are complex and unstable with extensive structural variations, ranging from aneuploidies to multiple copy number variations (CNVs). [...]
2022 - 10.3390/microorganisms10112256
Microorganisms, Vol. 10 (november 2022)
|
|
|
6.
|
|
9 p, 1.3 MB |
Whole Genome Sequencing of Hepatitis A Virus Using a PCR-Free Single-Molecule Nanopore Sequencing Approach
/
Batista, Frederico M. (International Centre of Excellence for Aquatic Animal Health, Centre for Environment Fisheries and Aquaculture Science (CEFAS)) ;
Stapleton, Tina (International Centre of Excellence for Aquatic Animal Health, Centre for Environment Fisheries and Aquaculture Science (CEFAS)) ;
Lowther, James A. (International Centre of Excellence for Aquatic Animal Health, Centre for Environment Fisheries and Aquaculture Science (CEFAS)) ;
Fonseca, Vera G. (International Centre of Excellence for Aquatic Animal Health, Centre for Environment Fisheries and Aquaculture Science (CEFAS)) ;
Shaw, Rebecca (International Centre of Excellence for Aquatic Animal Health, Centre for Environment Fisheries and Aquaculture Science (CEFAS)) ;
Pond, Christopher (International Centre of Excellence for Aquatic Animal Health, Centre for Environment Fisheries and Aquaculture Science (CEFAS)) ;
Walker, David I. (International Centre of Excellence for Aquatic Animal Health, Centre for Environment Fisheries and Aquaculture Science (CEFAS)) ;
van Aerle, Ronny (International Centre of Excellence for Aquatic Animal Health, Centre for Environment Fisheries and Aquaculture Science (CEFAS)) ;
Martinez-Urtaza, Jaime (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia)
Hepatitis A virus (HAV) is one of the most common causes of acute viral hepatitis in humans. Although HAV has a relatively small genome, there are several factors limiting whole genome sequencing such as PCR amplification artefacts and ambiguities in de novo assembly. [...]
2020 - 10.3389/fmicb.2020.00874
Frontiers in microbiology, Vol. 11 (May 2020) , art. 874
|
|
|
7.
|
|
13 p, 3.9 MB |
Transmission of Similar Mcr-1 Carrying Plasmids among Different Escherichia coli Lineages Isolated from Livestock and the Farmer
/
Viñes, Joaquim (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ;
Saez-Llorente, Jose Luis (Ministerio de Agricultura, Pesca y Alimentación. Area de Programas Sanitarios y Zoonosis) ;
Rosàs-Rodoreda, Montserrat (Servei d'Alimentació Animal i Seguretat de la Producció Ramadera. Departament d'Agricultura, Ramaderia, Pesca i Alimentació) ;
Francino, Olga (Universitat Autònoma de Barcelona. Servei Veterinari de Genètica Molecular (SVGM)) ;
Migura-Garcia, Lourdes (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal) ;
Cuscó, Anna (Universitat Autònoma de Barcelona. Vetgenomics) ;
Napp Avelli, Sebastián (Institut de Recerca i Tecnologia Agroalimentàries. Centre de Recerca en Sanitat Animal) ;
Álvarez, Julio (Universidad Complutense de Madrid. Departamento de Sanidad Animal)
Colistin use has mostly been stopped in human medicine, due to its toxicity. However, nowadays, it still is used as a last-resort antibiotic to treat hospital infections caused by multi-drug resistant Enterobacteriaceae. [...]
2021 - 10.3390/antibiotics10030313
Antibiotics, Vol. 10 Núm. 3 (2021) , p. 313
|
|
|
8.
|
|
6 p, 757.8 KB |
Flow sorting enrichment and nanopore sequencing of chromosome 1 from a Chinese individual
/
Kuderna, Lukas (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ;
Solís Moruno, Manuel (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ;
Batlle-Masó, Laura (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ;
Julià, Eva (Institut Hospital del Mar d'Investigacions Mèdiques) ;
Lizano, Esther (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ;
Anglada, Roger (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ;
Ramírez, Erika (Centre de Regulació Genòmica) ;
Bote, Alex (Centre de Regulació Genòmica) ;
Tormo, Marc (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ;
Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont) ;
Fornas, Òscar (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut) ;
Casals, Ferran (Universitat Pompeu Fabra. Departament de Ciències Experimentals i de la Salut)
Sorting of individual chromosomes by Flow Cytometry (flow-sorting) is an enrichment method to potentially simplify genome assembly by isolating chromosomes from the context of the genome. We have recently developed a workflow to sequence native, unamplified DNA and applied it to the smallest human chromosome, the Y chromosome. [...]
2020 - 10.3389/fgene.2019.01315
Frontiers in genetics, Vol. 10 (January 2020) , art. 1315
|
|
visitante ::
identificación
alerta personal vía correo electrónico o subscríbase al 
canal RSS.
