@article{ddd.uab.cat:113316,
author = {Ovilo, Cristina) and Oliver, Àngels) and Noguera, José Luis
and Clop, Alex and Barragán, Carmen) and Varona, Luis and
Rodriguez, Carmen) and Toro, Miguel) and Sánchez Bonastre,
Armando and Perez-Enciso, Miguel and Silió, Luis)},
title = {Test for positional candidate genes for body composition on pig
chromosome 6},
journal = {Genetics, selection, evolution},
year = {2002},
volume = {34},
pages = {465--479},
month = {7},
abstract = {One QTL affecting backfat thickness (BF), intramuscular fat
content (IMF) and eye muscle area (MA) was previously localized
on porcine chromosome 6 in an F2 cross between Iberian and
Landrace pigs. This work was done to study the effect of two
positional candidate genes on these traits: H-FABP and LEPR
genes. The QTL mapping analysis was repeated with a regression
method using genotypes for seven microsatellites and two PCR-
RFLPs in the H-FABP and LEPR genes. H-FABP and LEPR genes were
located at 85.4 and 107 cM respectively, by linkage analysis. The
effects of the candidate gene polymorphisms were analyzed in two
ways. When an animal model was fitted, both genes showed
significant effects on fatness traits, the H-FABP polymorphism
showed significant effects on IMF and MA, and the LEPR
polymorphism on BF and IMF. But when the candidate gene effect
was included in a QTL regression analysis these associations were
not observed, suggesting that they must not be the causal
mutations responsible for the effects found. Differences in the
results of both analyses showed the inadequacy of the animal
model approach for the evaluation of positional candidate genes
in populations with linkage disequilibrium, when the
probabilities of the parental origin of the QTL alleles are not
included in the model.},
doi = {10.1186/1297-9686-34-4-465},
url = {https://ddd.uab.cat/record/113316},
}