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25 p, 6.3 MB

Principles of 3D chromosome folding and evolutionary genome reshuffling in mammals / Álvarez-González, Lucía (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia) ; Arias-Sardá, Cristina (University of Kent. School of Biosciences) ; Montes-Espuña, Laia (Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ; Marin Gual, Laia (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia) ; Vara González, Covadonga (Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí") ; Lister, Nicholas C. (University of New South Wales. School of Biotechnology and Biomolecular Sciences) ; Cuartero, Yasmina (Centre de Regulació Genòmica) ; García, Francisca (Universitat Autònoma de Barcelona. Servei de Cultius Cel·lulars, Producció d'Anticossos i Citometria) ; Deakin, Janine (University of Canberra. Institute for Applied Ecology) ; Renfree, Marilyn B. (The University of Melbourne. School of Biosciences) ; Robinson, Terence J. (Stellenbosch University. Department of Botany and Zoology) ; Martí-Renom, Marc A. (Centre de Regulació Genòmica) ; Waters, Paul D. (University of New South Wales. School of Biotechnology and Biomolecular Sciences) ; Farré, Marta (University of Kent. School of Biosciences) ; Ruiz-Herrera Moreno, Aurora (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia)
Studying the similarities and differences in genomic interactions between species provides fertile grounds for determining the evolutionary dynamics underpinning genome function and speciation. Here, we describe the principles of 3D genome folding in vertebrates and show how lineage-specific patterns of genome reshuffling can result in different chromatin configurations. [...]
2022 - DOI (Digital Object Identifier)

10.1016/j.celrep.2022.111839
Cell reports, Vol. 41, Issue 12 (December 2022) , art. 111839

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17 p, 933.8 KB

Chromosomics : bridging the gap between genomes and chromosomes / E. Deakin, Janine (University of Canberra. Institute for Applied Ecology) ; Potter, Sally (Australian National University) ; O'Neill, Rachel (University of Connecticut. Institute for Systems Genomics and Department of Molecular and Cell Biology) ; Ruiz-Herrera Moreno, Aurora (Universitat Autònoma de Barcelona. Departament de Biologia Cel·lular, de Fisiologia i d'Immunologia) ; B. Ciof, Marcelo (Universidade Federal de São Carlos) ; D. B. Eldridge, Mark (Australian Museum Research Institute) ; Fukui, Kichi (Osaka University. Graduate School of Pharmaceutical Sciences) ; Marshall Graves, Jennifer A. (University of Canberra. Institute for Applied Ecology) ; Griffin, Darren (University of Kent. School of Biosciences) ; Grutzner, Frank (The University of Adelaide. School of Biological Sciences) ; Kratochvíl, Lukáš (Charles University. Department of Ecology) ; Miura, Ikuo (Hiroshima University. Amphibian Research Center) ; Rovatsos, Michail (The University of Adelaide. School of Biological Sciences) ; Srikulnath, Kornsorn (Kasetsart University. Department of Genetics, Faculty of Science) ; Wapstra, Erik (University of Tasmania. School of Natural Sciences) ; Universitat Autònoma de Barcelona. Institut de Biotecnologia i de Biomedicina "Vicent Villar Palasí"
The recent advances in DNA sequencing technology are enabling a rapid increase in the number of genomes being sequenced. However, many fundamental questions in genome biology remain unanswered, because sequence data alone is unable to provide insight into how the genome is organised into chromosomes, the position and interaction of those chromosomes in the cell, and how chromosomes and their interactions with each other change in response to environmental stimuli or over time. [...]
2019 - DOI (Digital Object Identifier)

10.3390/genes10080627
Genes, Vol. 10 (2019) , p. 1-17

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