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1.
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35 p, 2.4 MB |
Genomic analysis of two phlebotomine sand fly vectors of Leishmania from the New and Old World
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Labbé, Frédéric (University of Notre Dame) ;
Abdeladhim, Maha (National Institutes of Health (United States of America)) ;
Abrudan, Jenica (Medical College of Wisconsin) ;
Araki, Alejandra Saori (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Araujo, Ricardo N. (Universidade Federal de Minas Gerais) ;
Arensburger, Peter (California State Polytechnic University) ;
Benoit, Joshua B. (University of Cincinnati) ;
Brazil, Reginaldo Pecanha (Instituto Oswaldo Cruz (Brazil)) ;
Bruno, Rafaela V. (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Bueno da Silva Rivas, Gustavo (Texas A&M University) ;
Carvalho de Abreu, Vinicius (Universidade Federal de Minas Gerais) ;
Charamis, Jason (University of Crete) ;
Coutinho-Abreu, Iliano V. (University of California) ;
da Costa-Latgé, Samara G. (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Darby, Alistair (The University of Liverpool) ;
Dillon, Viv M. (The University of Liverpool) ;
Emrich, Scott J. (University of Tennessee) ;
Fernandez-Medina, Daniela (Getulio Vargas Foundation) ;
Figueiredo Gontijo, Nelder (Universidade Federal de Minas Gerais) ;
Flanley, Catherine M. (University of Notre Dame) ;
Gatherer, Derek (Lancaster University) ;
Genta, Fernando A. (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Gesing, Sandra (University of Illinois Chicago) ;
Giraldo-Calderón, Gloria I. (Universidad Icesi) ;
Gomes, Bruno (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Aguiar, Eric Roberto Guimaraes Rocha (Universidade Federal de Minas Gerais) ;
Hamilton, James G. C. (Lancaster University) ;
Hamarsheh, Omar (Al-Quds University) ;
Hawksworth, Mallory (University of Notre Dame) ;
Hendershot, Jacob M. (University of Cincinnati) ;
Hickner, Paul V. (Knipling-Bushland U.S. Livestock Insects Research Laboratory) ;
Imler, Jean-Luc (Université de Strasbourg) ;
Ioannidis, Panagiotis (Foundation for Research and Technology Hellas) ;
Jennings, Emily C. (University of Cincinnati) ;
Kamhawi, Shaden (National Institutes of Health (United States of America)) ;
Karageorgiou, Charikleia (Universitat Autònoma de Barcelona. Departament de Genètica i de Microbiologia) ;
Kennedy, Ryan C. (University of Notre Dame) ;
Krueger, Andreas (Central Bundeswehr Hospital) ;
Latorre-Estivalis, José M. (Universidad de Buenos Aires) ;
Ligoxygakis, Petros (University of Oxford) ;
Meireles-Filho, Antonio Carlos A. (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Minx, Patrick (Donald Danforth Plant Science Center) ;
Miranda, Jose Carlos (Fundação Oswaldo Cruz (Brasil)) ;
Montague, Michael J. (University of Pennsylvania) ;
Nowling, Ronald J. (Milwaukee School of Engineering) ;
Oliveira, Fabiano (National Institutes of Health (United States of America)) ;
Ortigão-Farias, João (Instituto Oswaldo Cruz) ;
Pavan, Marcio G. (Laboratório de Transmissores de Hematozoários (Brazil)) ;
Horacio Pereira, Marcos (Universidade Federal de Minas Gerais) ;
Nobrega Pitaluga, Andre (Instituto Oswaldo Cruz) ;
Proveti Olmo, Roenick (Universidade Federal de Minas Gerais) ;
Ramalho-Ortigao, Marcelo (Uniformed Services University) ;
Ribeiro, José M. C. (National Institutes of Health (United States of America)) ;
Rosendale, Andrew J. (Texas A&M University) ;
Sant'Anna, Mauricio R. V. (Universidade Federal de Minas Gerais) ;
Scherer, Steven E. (Baylor College of Medicine) ;
Secundino, Nágila F. C. (René Rachou Institute-FIOCRUZ) ;
Shoue, Douglas A. (University of Notre Dame) ;
da Silva Moraes, Caroline (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Gesto, João Silveira Moledo (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Souza, Nataly Araujo (Laboratory Interdisciplinar em Vigilancia Entomologia em Diptera e Hemiptera) ;
Syed, Zainulabueddin (University of Kentucky) ;
Tadros, Samuel (University of Notre Dame) ;
Teles-de-Freitas, Rayane (Laboratório de Bioquímica e Fisiologia de Insetos (Brazil)) ;
Telleria, Erich L. (Charles University) ;
Tomlinson, Chad (Washington University School of Medicine) ;
Traub-Csekö, Yara M. (Instituto Oswaldo Cruz) ;
Marques, João Trindade (Texas A&M University) ;
Tu, Zhijian (Virginia Tech) ;
Unger, Maria F. (University of Notre Dame) ;
Valenzuela, Jesus (National Institutes of Health (United States of America)) ;
Ferreira, Flávia V. (Universidade Federal de Minas Gerais) ;
de Oliveira, Karla P. V. (Universidade Federal de Minas Gerais) ;
Vigoder, Felipe M. (Universidade Federal do Rio de Janeiro) ;
Vontas, John (Agricultural University of Athens) ;
Wang, Lihui (Donald Danforth Plant Science Center) ;
Weedall, Gareth D. (Liverpool John Moores University) ;
Zhioua, Elyes (Institut Pasteur de Tunis) ;
Richards, Stephen (Baylor College of Medicine) ;
Warren, Wesley C. (University of Missouri) ;
Waterhouse, Robert M. (University of Lausanne) ;
Dillon, Rod J. (Lancaster University) ;
McDowell, Mary Ann (University of Notre Dame)
Phlebotomine sand flies are of global significance as important vectors of human disease, transmitting bacterial, viral, and protozoan pathogens, including the kinetoplastid parasites of the genus Leishmania, the causative agents of devastating diseases collectively termed leishmaniasis. [...]
2023 -  10.1371/journal.pntd.0010862
PLoS neglected tropical diseases, Vol. 17, Num. 4 (April 2023) , art. e0010862
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2.
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32 p, 22.5 MB |
Towards complete and error-free genome assemblies of all vertebrate species
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Rhie, Arang (National Institutes of Health. National Human Genome Research Institute (USA)) ;
McCarthy, Shane A. (University of Cambridge. Department of Genetics (UK)) ;
Fedrigo, Olivier (The Rockefeller University. Vertebrate Genome Lab (USA)) ;
Damas, Joana (University of California Davis. The Genome Center (USA)) ;
Formenti, Giulio (The Rockefeller University. Vertebrate Genome Lab (USA)) ;
Koren, Sergey (National Institutes of Health. National Human Genome Research Institute (USA)) ;
Uliano da Silva, Marcela (Leibniz Institute for Zoo and Wildlife Research. Department of Evolutionary Genetics (Germany)) ;
Chow, William (Wellcome Trust Sanger Institute (Regne Unit)) ;
Fungtammasan, Arkarachai (DNAnexus Inc. (USA)) ;
Kim, Juwan (Seoul National University. Interdisciplinary Program in Bioinformatics (Republic of Korea)) ;
Lee, Chul (Seoul National University. Interdisciplinary Program in Bioinformatics (Republic of Korea)) ;
Ko, Byung June (Seoul National University. Department of Agricultural Biotechnology (Republic of Korea)) ;
Chaisson, Mark (University of Southern California (USA)) ;
Gedman, Gregory L. (The Rockefeller University. Laboratory of Neurogenetics of Language (USA)) ;
Cantin, Lindsey J. (The Rockefeller University. Laboratory of Neurogenetics of Language (USA)) ;
Thibaud-Nissen, Françoise (National Library of Medicine. National Center for Biotechnology Information (USA)) ;
Haggerty, Leanne (European Bioinformatics Institute. European Molecular Biology Laboratory (UK)) ;
Bista, Iliana (University of Cambridge. Department of Genetics (UK)) ;
Smith, Michelle (Wellcome Trust Sanger Institute (Regne Unit)) ;
Haase, Bettina (The Rockefeller University. Vertebrate Genome Lab (USA)) ;
Mountcastle, Jacquelyn (The Rockefeller University. Vertebrate Genome Lab (USA)) ;
Winkler, Sylke (Max Planck Institute of Molecular Cell Biology and Genetics (Germany)) ;
Paez, Sadye (The Rockefeller University. Vertebrate Genome Lab (USA)) ;
Howard, Jason (Novogene (USA)) ;
Vernes, Sonja C. (Donders Institute for Brain, Cognition and Behaviour (The Netherlands)) ;
Lama, Tanya M. (University of Massachusetts. Cooperative Fish and Wildlife Research Unit (USA)) ;
Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont) ;
Warren, Wesley (University of Missouri. Bond Life Sciences Center (USA)) ;
Balakrishnan, Christopher N. (East Carolina University. Department of Biology (USA)) ;
Burt, Dave (University of Queensland. UQ Genomics (Australia)) ;
George, Julia M. (Clemson University. Department of Biological Sciences (USA)) ;
Biegler, Matthew T. (The Rockefeller University. Laboratory of Neurogenetics of Language (USA)) ;
Iorns, David (The Genetic Rescue Foundation (New Zealand)) ;
Digby, Andrew (Kākāpō Recovery, Department of Conservation (New Zealand)) ;
Eason, Daryl (Kākāpō Recovery, Department of Conservation (New Zealand)) ;
Robertson, Bruce (University of Otago. Department of Zoology (New Zealand)) ;
Edwards, Taylor (University of Arizona Genetics Core (USA)) ;
Wilkinson, Mark (Natural History Museum. Department of Life Sciences (UK)) ;
Turner, George (Bangor University. School of Natural Sciences (UK)) ;
Meyer, Axel (University of Konstanz. Department of Biology (Germany)) ;
Kautt, Andreas F. (University of Konstanz. Department of Biology (Germany)) ;
Franchini, Paolo (University of Konstanz. Department of Biology (Germany)) ;
Detrich III, H. William (Northeastern University Marine Science Center. Department of Marine and Environmental Sciences (USA)) ;
Svardal, Hannes (University of Antwerp. Department of Biology (Belgium)) ;
Wagner, Maximilian (Karl-Franzens University of Graz. Institute of Biology (Austria)) ;
Naylor, Gavin J. P. (University of Florida. Florida Museum of Natural History (USA)) ;
Pippel, Martin (Max Planck Institute of Molecular Cell Biology and Genetics (Germany)) ;
Malinsky, Milan (University of Basel. Zoological Institute (Switzerland)) ;
Mooney, Mark (Tag.bio (USA)) ;
Simbirsky, Maria (DNAnexus Inc. (USA)) ;
Hannigan, Brett T. (DNAnexus Inc. (USA)) ;
Pesout, Trevor (University of California. UC Santa Cruz Genomics Institute (USA)) ;
Houck, Marlys (San Diego Zoo Global (USA)) ;
Misuraca, Ann (San Diego Zoo Global (USA)) ;
Kingan, Sarah B. (Pacific Biosciences (USA)) ;
Hall, Richard (Pacific Biosciences (USA)) ;
Kronenberg, Zev (Pacific Biosciences (USA)) ;
Sović, Ivan (Pacific Biosciences (USA)) ;
Dunn, Christopher (Pacific Biosciences (USA)) ;
Ning, Zemin (Wellcome Trust Sanger Institute (Regne Unit)) ;
Hastie, Alex (Bionano Genomics (USA)) ;
Lee, Joyce (Bionano Genomics (USA)) ;
Selvaraj, Siddarth (Arima Genomics (USA)) ;
Green, Richard E. (University of California. UC Santa Cruz Genomics Institute (USA)) ;
Putnam, Nicholas H. (Independent Researcher. Santa Cruz (USA)) ;
Gut, Ivo (Centro Nacional de Análisis Genómico. Instituto de Ciencia y Tecnología de Barcelona) ;
Ghurye, Jay (University of Maryland College Park. Department of Computer Science (USA)) ;
Garrison, Erik (University of California. UC Santa Cruz Genomics Institute (USA)) ;
Sims, Ying (Wellcome Trust Sanger Institute (Regne Unit)) ;
Collins, Joanna (Wellcome Trust Sanger Institute (Regne Unit)) ;
Pelan, Sarah (Wellcome Trust Sanger Institute (Regne Unit)) ;
Torrance, James (Wellcome Trust Sanger Institute (Regne Unit)) ;
Tracey, Alan (Wellcome Trust Sanger Institute (Regne Unit)) ;
Wood, Jonathan (Wellcome Trust Sanger Institute (Regne Unit)) ;
Dagnew, Robel E. (University of Southern California (USA)) ;
Guan, Dengfeng (Harbin Institute of Technology. Center for Bioinformatics. School of Computer Science and Technology (China)) ;
London, Sarah E. (University of Chicago. Institute for Mind and Biology. Department of Psychology (USA)) ;
Clayton, David F. (Clemson University. Department of Genetics and Biochemistry (USA)) ;
Mello, Claudio V. (Oregon Health and Science University. Department of Behavioral Neuroscience (USA)) ;
Friedrich, Samantha R. (Oregon Health and Science University. Department of Behavioral Neuroscience (USA)) ;
Lovell, Peter V. (Oregon Health and Science University. Department of Behavioral Neuroscience (USA)) ;
Osipova, Ekaterina (Max Planck Institute for the Physics of Complex Systems (Germany)) ;
Al-Ajli, Farooq O. (Monash University Malaysia. Tropical Medicine and Biology Multidisciplinary Platform (Malaysia)) ;
Secomandi, Simona (University of Milan. Department of Biosciences (Italy)) ;
Kim, Heebal (Seoul National University. Interdisciplinary Program in Bioinformatics (Republic of Korea)) ;
Theofanopoulou, Constantina (The Rockefeller University. Laboratory of Neurogenetics of Language (USA)) ;
Hiller, Michael (Goethe-University. Faculty of Biosciences (Germany)) ;
Zhou, Yang (BGI-Shenzhen (China)) ;
Harris, Robert S. (Pennsylvania State University. Department of Biology (USA)) ;
Makova, Kateryna D. (Pennsylvania State University. Department of Biology (USA)) ;
Medvedev, Paul (Pennsylvania State University. Center for Medical Genomics (USA)) ;
Hoffman, Jinna (National Library of Medicine. National Center for Biotechnology Information (USA)) ;
Masterson, Patrick (National Library of Medicine. National Center for Biotechnology Information (USA)) ;
Clark, Karen (National Library of Medicine. National Center for Biotechnology Information (USA)) ;
Martin, Fergal J. (European Bioinformatics Institute. European Molecular Biology Laboratory (UK)) ;
Howe, Kevin (European Bioinformatics Institute. European Molecular Biology Laboratory (UK)) ;
Flicek, Paul (European Bioinformatics Institute. European Molecular Biology Laboratory (UK)) ;
Walenz, Brian P. (National Institutes of Health. National Human Genome Research Institute (USA)) ;
Kwak, Woori (eGnome, Inc. (Republic of Korea)) ;
Clawson, Hiram (University of California. UC Santa Cruz Genomics Institute (USA)) ;
Diekhans, Mark (University of California. UC Santa Cruz Genomics Institute (USA)) ;
Nassar, Luis (University of California. UC Santa Cruz Genomics Institute (USA)) ;
Paten, Benedict (University of California. UC Santa Cruz Genomics Institute (USA)) ;
Kraus, Robert H. S. (Max Planck Institute of Animal Behavior. Department of Migration (Germany)) ;
Crawford, Andrew J. (Universidad de los Andes. Department of Biological Sciences (Colombia)) ;
Gilbert, M. Thomas P. (University of Copenhagen. The GLOBE Institute. Center for Evolutionary Hologenomics (Denmark)) ;
Zhang, Guojie (Chinese Academy of Sciences. Center for Excellence in Animal Evolution and Genetics (China)) ;
Venkatesh, Byrappa (A*STAR. Institute of Molecular and Cell Biology (Singapore)) ;
Murphy, Robert W. (Royal Ontario Museum. Centre for Biodiversity (Canada)) ;
Koepfli, Klaus-Peter (Smithsonian Conservation Biology Institute) ;
Shapiro, Beth (Howard Hughes Medical Institute (USA)) ;
Johnson, Warren E. (Smithsonian Conservation Biology Institute) ;
Di Palma, Federica (University of East Anglia. Earlham Institute. Department of Biological Sciences (UK)) ;
Teeling, Emma C. (University College Dublin. School of Biology and Environmental Science (Ireland)) ;
Warnow, Tandy (The University of Illinois at Urbana-Champaign. Department of Computer Science (USA)) ;
Graves, Jennifer Marshall (La Trobe University. School of Life Science (Australia)) ;
Ryder, Oliver A. (University of California San Diego. Department of Evolution, Behavior, and Ecology (USA)) ;
Haussler, David (University of California Santa Cruz. Department of Ecology and Evolutionary Biology (USA)) ;
O'Brien, Stephen J. (ITMO University. Laboratory of Genomics Diversity-Center for Computer Technologies (Russian Federation)) ;
Korlach, Jonas (Pacific Biosciences (USA)) ;
Lewin, Harris A. (University of California Davis. John Muir Institute for the Environment (USA)) ;
Howe, Kerstin (Wellcome Trust Sanger Institute (Regne Unit)) ;
Myers, Eugene W. (Max Planck Institute of Molecular Cell Biology and Genetics (Germany)) ;
Durbin, Richard (University of Cambridge. Department of Genetics (UK)) ;
Phillippy, Adam M. (National Institutes of Health. National Human Genome Research Institute (USA)) ;
Jarvis, Erich (The Rockefeller University. Vertebrate Genome Lab (USA))
High-quality and complete reference genome assemblies are fundamental for the application of genomics to biology, disease, and biodiversity conservation. However, such assemblies are available for only a few non-microbial species 1, 2, 3, 4. [...]
2021 - 10.1038/s41586-021-03451-0
Nature, Vol. 592 (April 2021) , p. 737-746
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3.
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12 p, 2.8 MB |
The genomics of ecological flexibility, large brains,and long lives in capuchin monkeys revealedwith fecalFACS
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Orkin, Joseph (University of Calgary. Department of Anthropology and Archaeology) ;
Montague, Michael (University of Pennsylvania. Department of Neuroscience) ;
Tejada-Martinez, Daniela (Thomas Jefferson University. Department of Biochemistry and Molecular Biology) ;
de Manuel, Marc (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ;
del Campo, Javier (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ;
Cheves Hernandez, Saul (Área de Concervación Guanacaste) ;
Di Fiore, Anthony (University of Texas at Austin. Department of Anthropology and Primate Molecular Ecology and Evolution Laboratory) ;
Fontsere, Claudia (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ;
Hodgson, Jason A. (Pennsylvania State University. Department of Anthropology) ;
Janiak, Mareike (University of Calgary. Department of Anthropology and Archaeology) ;
Kuderna, Lukas (Institut de Biologia Evolutiva (UPF-CSIC) (Barcelona)) ;
Lizano, Esther (Institut Català de Paleontologia Miquel Crusafont) ;
Martino, Maria Pia (Kids Saving the Rainforest Wildlife Rescue Center) ;
Niimura, Yoshihito (The University of Tokyo. Department of Applied Biological Chemistry) ;
Perry, George (Pennsylvania State University. Department of Anthropology) ;
Soto Valverde, Carmen (Kids Saving the Rainforest Wildlife Rescue Center) ;
Tanga, Jia (University of Calgary. Department of Anthropology and Archaeology) ;
Warren, Wesley (University of Missouri. Division of Animal Sciences, School of Medicine) ;
de Magalhaes, Joao Pedro (University of Liverpool. Institute of Ageing and Chronic Disease) ;
Kawamura, Shoji (The University of Tokyo. Department of Integrated Biosciences) ;
Marques-Bonet, Tomas 1975- (Institut Català de Paleontologia Miquel Crusafont) ;
Krawetz, Roman (University of Calgary. Department of Cell Biology and Anatomy) ;
Melin, Amanda D. (University of Calgary. Department of Anthropology and Archaeology)
Ecological flexibility, extended lifespans, and large brains have long intrigued evolutionary biologists, and comparative genomics offers an efficient and effective tool for generating new insights into the evolution of such traits. [...]
2021 - 10.1073/pnas.2010632118
Proceedings of the National Academy of Sciences of the United States of America, Vol. 118, Issue 7 (February 2021) , e2010632118
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