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Single-cell RNA sequencing-derived signatures define response patterns to atezolizumab + bevacizumab in advanced hepatocellular carcinoma
Cappuyns, Sarah (UZ Leuven (Bèlgica))
Piqué-Gili, Marta (Universitat de Barcelona)
Esteban-Fabró, Roger (Universitat de Barcelona)
Philips, Gino (VIB Centre for Cancer Biology)
Balaseviciute, Ugne (Universitat de Barcelona)
Pinyol, Roser (Universitat de Barcelona)
Gris-Oliver, Albert (Universitat de Barcelona)
Vandecaveye, Vincent (UZ Leuven (Bèlgica))
Abril-Fornaguera, Jordi (Universitat de Barcelona)
Montironi, Carla (Universitat de Barcelona)
Bassaganyas, Laia (Institut de Génomique Fonctionnelle)
Peix, Judit (Universitat de Barcelona)
Zeitlhoefler, Marcus (Icahn School of Medicine at Mount Sinai (Nova York, Estats Units d'Amèrica))
Mesropian, Agavni (Hospital Clínic i Provincial de Barcelona)
Huguet Pradell, Júlia (Hospital Clínic i Provincial de Barcelona)
Haber, Philipp K (Charité-Universitätsmedizin Berlin)
Figueiredo, Igor (Icahn School of Medicine at Mount Sinai (Nova York, Estats Units d'Amèrica))
Ioannou, Giorgio (Icahn School of Medicine at Mount Sinai (Nova York, Estats Units d'Amèrica))
Gonzalez Kozlova, Edgar (Icahn School of Medicine at Mount Sinai (Nova York, Estats Units d'Amèrica))
D'Alessio, Antonio (Hammersmith Hospital (Londres))
Mohr, Raphael (Charité-Universitätsmedizin Berlin)
Meyer, Tim (University College London)
Lachenmayer, Anja (University Hospital Bern)
Marquardt, Jens U (University Medical Center Schleswig Holstein Campus Lübeck)
Reeves, Helen L. (Newcastle University Translational and Clinical Research Institute and Newcastle University Centre for Cancer)
Edeline, Julien (Centre Eugène Marquis)
Finkelmeier, Fabian (University Liver and Cancer Centre)
Trojan, Jorg (University Liver and Cancer Centre)
Galle, Peter R (University Medical Center of the Johannes-Gutenberg University)
Foerster, Friedrich (University Medical Center of the Johannes-Gutenberg University)
Mínguez Rosique, Beatriz (Universitat Autònoma de Barcelona. Departament de Medicina)
Montal, Robert (Hospital Arnau de Vilanova (Lleida, Catalunya))
Gnjatic, Sacha (Icahn School of Medicine at Mount Sinai (Nova York, Estats Units d'Amèrica))
Pinato, David James (Università Del Piemonte Orientale "A. Avogadro")
Heikenwälder, Mathias (German Cancer Research Center (DKFZ))
Verslype, Chris (UZ Leuven (Bèlgica))
Van Cutsem, Eric (UZ Leuven (Bèlgica))
Lambrechts, Diether (VIB Centre for Cancer Biology)
Villanueva, Augusto (Tisch Cancer Institute, Icahn School of Medicine at Mount Sinai)
Dekervel, Jeroen (UZ Leuven (Bèlgica))
Llovet, Josep M. (Hospital Clínic i Provincial de Barcelona)

Data: 2025
Resum: The combination of atezolizumab and bevacizumab (atezo+bev) is the current standard of care for advanced hepatocellular carcinoma (HCC), providing a median overall survival (OS) of 19. 2 months. Here, we aim to uncover the underlying cellular processes driving clinical benefit vs. resistance to atezo+bev. We harnessed the power of single-cell RNA sequencing in advanced HCC to derive gene expression signatures recapitulating 21 cell phenotypes. These signatures were applied to 422 RNA-sequencing samples of patients with advanced HCC treated with atezo+bev (n = 317) vs. atezolizumab (n = 47) or sorafenib (n = 58) as comparators. We unveiled two distinct patterns of response to atezo+bev. First, an immune-mediated response characterised by the combined presence of CD8+ T effector cells and pro-inflammatory CXCL10+ macrophages, representing an immune-rich microenvironment. Second, a non-immune, angiogenesis-related response distinguishable by a reduced expression of the VEGF co-receptor neuropilin-1 (NRP1), a biomarker that specifically predicts improved OS upon atezo+bev vs. sorafenib (p = 0. 039). Primary resistance was associated with an enrichment of immunosuppressive myeloid populations, namely CD14+ monocytes and TREM2+ macrophages, and Notch pathway activation. Based on these mechanistic insights we define " Immune-competent " and " Angiogenesis-driven " molecular subgroups, each associated with a significantly longer OS with atezo+bev vs. sorafenib (p of interaction = 0. 027), and a " Resistant" subset. Our study unveils two distinct molecular subsets of clinical benefit to atezolizumab plus bevacizumab in advanced HCC (" Immune-competent" and " Angiogenesis-driven") as well as the main traits of primary resistance to this therapy, thus providing a molecular framework to stratify patients based on clinical outcome and guiding potential strategies to overcome resistance. Atezolizumab + bevacizumab (atezo+bev) is standard of care in advanced hepatocellular carcinoma (HCC), yet molecular determinants of clinical benefit to the combination remain unclear. This study harnesses the power of single-cell RNA sequencing, deriving gene expression signatures representing 21 cell subtypes in the advanced HCC microenvironment. By applying these signatures to RNA-sequencing samples, we reveal two distinct response patterns to atezo+bev and define molecular subgroups of patients (" Immune-competent" and " Angiogenesis-driven" vs. "Resistant") with differential clinical outcomes upon treatment with atezo+bev, pointing towards the role of immunosuppressive myeloid cell types and Notch pathway activation in primary resistance to atezo+bev. These results may help refine treatment strategies and improve outcomes for patients with advanced HCC, while also guiding future research aimed at overcoming resistance mechanisms.
Ajuts: Agencia Estatal de Investigación BES-2017-081286
Agencia Estatal de Investigación PID2022-139365OB-I00
Generalitat de Catalunya 2021/SGR-00338
European Commission 101136622
"la Caixa" Foundation LCF/PR/SP23/5295000
Generalitat de Catalunya 2021/SGR-01347
Drets: Aquest document està subjecte a una llicència d'ús Creative Commons. Es permet la reproducció total o parcial, la distribució, i la comunicació pública de l'obra, sempre que no sigui amb finalitats comercials, i sempre que es reconegui l'autoria de l'obra original. No es permet la creació d'obres derivades. Creative Commons
Llengua: Anglès
Document: Article ; recerca ; Versió publicada
Matèria: Advanced Hepatocellular Carcinoma ; Atezolizumab and bevacizumab ; Biomarkers of Response ; Single-Cell RNA-Sequencing ; Primary Resistance
Publicat a: Journal of hepatology, Vol. 82, Num. 6 (June 2025) , p. 1036-1049, ISSN 1600-0641

DOI: 10.1016/j.jhep.2024.12.016
PMID: 39709141


15 p, 2.8 MB

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 Registre creat el 2026-06-02, darrera modificació el 2026-06-09



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