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13 p, 1.6 MB |
Different Families of Retrotransposons and DNA Transposons Are Actively Transcribed and May Have Transposed Recently in Physcomitrium (Physcomitrella) patens
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Vendrell-Mir, Pol (Centre de Recerca en Agrigenòmica) ;
López-Obando, Mauricio (Swedish University of Agricultural Sciences. Department of Plant Biology) ;
Nogué, Fabien (Institut national de recherche pour l'agriculture, l'alimentation et l'environnement) ;
Casacuberta i Suñer, Josep M. 1962- (Centre de Recerca en Agrigenòmica)
Similarly to other plant genomes of similar size, more than half of the genome of P. patens is covered by Transposable Elements (TEs). However, the composition and distribution of P. patens TEs is quite peculiar, with Long Terminal Repeat (LTR)-retrotransposons, which form patches of TE-rich regions interleaved with gene-rich regions, accounting for the vast majority of the TE space. [...]
2020 -  10.3389/fpls.2020.01274
Frontiers in plant science, Vol. 11 (August 2020) , art. 1274
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27.
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12 p, 1.4 MB |
KatE from the bacterial plant pathogen Ralstonia solanacearum is a monofunctional catalase controlled by HrpG that plays a major role in bacterial survival to hydrogen peroxide
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Tondo, Maria Laura (Universidad Nacional de Rosario. Área Biología Molecular (Argentina)) ;
de Pedro Jové, Roger (Centre de Recerca en Agrigenòmica) ;
Vandecaveye, Agustina (Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Biología Molecular y Celular de Rosario (Argentina)) ;
Piskulic, Laura (Universidad Nacional de Rosario. Área Estadística y Procesamiento de Datos (Argentina)) ;
Orellano, Elena G. (Consejo Nacional de Investigaciones Científicas y Técnicas. Instituto de Biología Molecular y Celular de Rosario (Argentina)) ;
Valls, Marc (Centre de Recerca en Agrigenòmica)
Ralstonia solanacearum is the causative agent of bacterial wilt disease on a wide range of plant species. Besides the numerous bacterial activities required for host invasion, those involved in the adaptation to the plant environment are key for the success of infection. [...]
2020 - 10.3389/fpls.2020.01156
Frontiers in plant science, Vol. 11 (July 2020) , art. 1156
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31.
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8 p, 813.1 KB |
Resynthesis : marker-based partial reconstruction of elite genotypes in clonally-reproducing plant species
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Eduardo, Iban (Centre de Recerca en Agrigenòmica) ;
Alegre, Simó (Institut de Recerca i Tecnologia Agroalimentàries) ;
Alexiou, Konstantinos G. (Centre de Recerca en Agrigenòmica) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica)
We propose a method for marker-based selection of cultivars of clonally-reproducing plant species which keeps the basic genetic architecture of a top-performing cultivar (usually a partly heterozygous genotype), with the addition of some agronomically relevant differences (such as production time, product appearance or quality), providing added value to the product or cultivation process. [...]
2020 - 10.3389/fpls.2020.01205
Frontiers in plant science, Vol. 11 (August 2020) , art. 1205
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32.
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12 p, 2.0 MB |
Closed-loop crop cascade to optimize nutrient flows and grow low-impact vegetables in cities
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Rufí Salís, Martí (Universitat Autònoma de Barcelona. Institut de Ciència i Tecnologia Ambientals) ;
Parada, Felipe (Universitat Autònoma de Barcelona. Institut de Ciència i Tecnologia Ambientals) ;
Arcas Pilz, Verónica (Universitat Autònoma de Barcelona. Institut de Ciència i Tecnologia Ambientals) ;
Petit Boix, Anna (Petit Boix) (University of Freiburg. Chair of Societal Transition and Circular Economy) ;
Villalba, Gara (Universitat Autònoma de Barcelona. Institut de Ciència i Tecnologia Ambientals) ;
Gabarrell Durany, Xavier (Universitat Autònoma de Barcelona. Departament d'Enginyeria Química, Biològica i Ambiental)
Urban agriculture systems can significantly contribute towards mitigating the impacts of inefficient and complex food supply chains and increase urban food sovereignty. Moreover, improving these urban agriculture systems in terms of nutrient management can lead to a better environmental performance. [...]
2020 - 10.3389/fpls.2020.596550
Frontiers in plant science, Vol. 11 (Nov. 2020) , art. 596550
2 documents
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33.
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16 p, 1.3 MB |
Deciphering the biotic and climatic factors that influence floral scents : a systematic review of floral volatile emissions
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Farré-Armengol, Gerard (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Fernández-Martínez, Marcos (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Filella, Iolanda (Centre de Recerca Ecològica i d'Aplicacions Forestals) ;
Junker, Robert R. (University of Salzburg. Department of Biosciences) ;
Peñuelas, Josep (Centre de Recerca Ecològica i d'Aplicacions Forestals)
Currently, a global analysis of the information available on the relative composition of the floral scents of a very diverse variety of plant species is missing. Such analysis may reveal general patterns on the distribution and dominance of the volatile compounds that form these mixtures, and may also allow measuring the effects of factors such as the phylogeny, pollination vectors, and climatic conditions on the floral scents of the species. [...]
2020 - 10.3389/fpls.2020.01154
Frontiers in plant science, Vol. 11 (July 2020) , art. 1154
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14 p, 1.9 MB |
Exploring deep learning for complex trait genomic prediction in polyploid outcrossing species
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Zingaretti, Laura M. (Centre de Recerca en Agrigenòmica) ;
Gezan, Salvador Alejandro (University of Florida. School of Forest Resources and Conservation (USA)) ;
Ferrão, Luis Felipe V. (University of Florida. Horticultural Sciences Department (USA)) ;
Osorio, Luis F. (University of Florida. IFAS Gulf Coast Research and Education Center (USA)) ;
Monfort, Amparo (Centre de Recerca en Agrigenòmica) ;
Muñoz, Patricio R. (University of Florida. Horticultural Sciences Department (USA)) ;
Whitaker, Vance M. (University of Florida. IFAS Gulf Coast Research and Education Center (USA)) ;
Perez-Enciso, Miguel (Centre de Recerca en Agrigenòmica)
Genomic prediction (GP) is the procedure whereby the genetic merits of untested candidates are predicted using genome wide marker information. Although numerous examples of GP exist in plants and animals, applications to polyploid organisms are still scarce, partly due to limited genome resources and the complexity of this system. [...]
2020 - 10.3389/fpls.2020.00025
Frontiers in plant science, Vol. 11 (February 2020) , art. 25
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35.
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19 p, 1.4 MB |
Drought resistance by engineering plant tissue-specific responses
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Martignago, Damiano (Centre de Recerca en Agrigenòmica) ;
Rico Medina, Andrés (Centre de Recerca en Agrigenòmica) ;
Blasco Escámez, David (Centre de Recerca en Agrigenòmica) ;
Fontanet Manzaneque, Juan B. (Centre de Recerca en Agrigenòmica) ;
Caño Delgado, Ana I. (Centre de Recerca en Agrigenòmica)
Drought is the primary cause of agricultural loss globally, and represents a major threat to food security. Currently, plant biotechnology stands as one of the most promising fields when it comes to developing crops that are able to produce high yields in water-limited conditions. [...]
2020 - 10.3389/fpls.2019.01676
Frontiers in plant science, Vol. 10 (January 2020) , art. 1676
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