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13 p, 1.2 MB |
Modulating climacteric intensity in melon through QTL stacking
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Santo Domingo, Miguel (Centre de Recerca en Agrigenòmica) ;
Areco, Lorena (Centre de Recerca en Agrigenòmica) ;
Mayobre, Carlos (Centre de Recerca en Agrigenòmica) ;
Valverde, Laura (Centre de Recerca en Agrigenòmica) ;
Martín-Hernández, Ana Montserrat (Centre de Recerca en Agrigenòmica) ;
Pujol Abajo, Marta (Centre de Recerca en Agrigenòmica) ;
Garcia-Mas, Jordi (Centre de Recerca en Agrigenòmica)
Fruit ripening is one of the main processes affecting fruit quality and shelf life. In melon there are both climacteric and non-climacteric genotypes, making it a suitable species to study fruit ripening. [...]
2022 -  10.1093/hr/uhac131
Horticulture research, Vol. 9 (June 2022) , art. uhac131
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3.
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36 p, 5.9 MB |
Thorough Characterization of ETHQB3.5, a QTL Involved in Melon Fruit Climacteric Behavior and Aroma Volatile Composition
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Dos-Santos, Noelia (Universidad Politécnica de Cartagena. Departamento de Ingeniería Agronómica) ;
Bueso, María C. (Universidad Politécnica de Cartagena. Departamento de Matemática Aplicada y Estadística) ;
Díaz, Aurora (Instituto de Biología Molecular y Celular de Plantas) ;
Moreno, Eduard (Centre de Recerca en Agrigenòmica) ;
Garcia-Mas, Jordi (Centre de Recerca en Agrigenòmica) ;
Monforte, Antonio J. (Instituto de Biología Molecular y Celular de Plantas) ;
Fernández-Trujillo, Juan Pablo (Universidad de Cartagena)
The effect of the QTL involved in climacteric ripening ETHQB3. 5 on the fruit VOC composition was studied using a set of Near-Isogenic Lines (NILs) containing overlapping introgressions from the Korean accession PI 16375 on the chromosome 3 in the climacteric 'Piel de Sapo' (PS) genetic background. [...]
2023 - 10.3390/foods12020376
Foods, Vol. 12, Issue 2 (January 2023) . art. 376
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18 p, 888.4 KB |
New insights into flowering date in Prunus : fine mapping of a major QTL in sweet cherry
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Branchereau, Camille (Université de Bordeaux. INRAE) ;
Quero-García, José (Université de Bordeaux. INRAE) ;
Zaracho, Nathalia (Centre de Recerca en Agrigenòmica) ;
Lambelin, Laurine (Université de Bordeaux. INRAE) ;
Fouché, Mathieu (Université de Bordeaux. INRAE) ;
Wenden, Bénédicte (Université de Bordeaux. INRAE) ;
Donkpegan, Armel S.L. (Centre INRAE Val de Loire) ;
Le Dantec, Loïck (Université de Bordeaux. INRAE) ;
Barreneche, Teresa (Université de Bordeaux. INRAE) ;
Alletru, David (INRAE. Unité Expérimentale Arboricole (Toulenne)) ;
Parmentier, Julien (INRAE. Unité Expérimentale Arboricole (Toulenne)) ;
Dirlewanger, Elisabeth (Université de Bordeaux. INRAE)
Flowering date is an important trait in Prunus fruit species, especially for their adaptation in a global warming context. Numerous quantitative trait loci (QTLs) have been identified and a major one was previously located on LG4. [...]
2022 - 10.1093/hr/uhac042
Horticulture research, Vol. 9 (February 2022) , art. uhac042
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17 p, 1.7 MB |
A cryptic variation in a member of the Ovate Family Proteins is underlying the melon fruit shape QTL fsqs8.1
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Martínez Martínez, Cecilia (Instituto de Biología Molecular y Celular de Plantas) ;
Gonzalo, Maria José (Instituto de Biología Molecular y Celular de Plantas) ;
Sipowicz, Pablo (Instituto Nacional de Tecnología Agropecuaria - INTA (Argentina)) ;
Campos, Manuel (Instituto de Biología Molecular y Celular de Plantas) ;
Martínez Fernández, Irene (Instituto de Biología Molecular y Celular de Plantas) ;
Leida, Carmen (Universitat Politècnica de València. Instituto de Conservación y Mejora de la Agrodiversidad Valenciana) ;
Zouine, Mohammed (Centre National de la Recherche Scientifique. Université de Toulouse. Laboratoire de Recherche en Sciences Végétales) ;
Alexiou, Konstantinos G. (Centre de Recerca en Agrigenòmica) ;
Garcia-Mas, Jordi (Centre de Recerca en Agrigenòmica) ;
Gómez, María Dolores (Instituto de Biología Molecular y Celular de Plantas) ;
Tornero, Pablo (Instituto de Biología Molecular y Celular de Plantas) ;
Pérez Amador, Miguel Ángel (Instituto de Biología Molecular y Celular de Plantas) ;
Esteras, Cristina ;
Picó, Belén (Universitat Politècnica de València. Instituto de Conservación y Mejora de la Agrodiversidad Valenciana) ;
Romero, Carlos (Instituto de Biología Molecular y Celular de Plantas) ;
Monforte, Antonio J. (Instituto de Biología Molecular y Celular de Plantas)
Key message: The gene underlying the melon fruit shape QTL fsqs8. 1 is a member of the Ovate Family Proteins. Variation in fruit morphology is caused by changes in gene expression likely due to a cryptic structural variation in this locus. [...]
2021 - 10.1007/s00122-021-03998-6
Theoretical and Applied Genetics, (November 2021)
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21 p, 1.6 MB |
Using genome wide association studies to identify common QTL regions in three different genetic backgrounds based on Iberian pig breed
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Martínez-Montes, Ángel M. (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (Espanya). Departamento de Mejora Genética Animal) ;
Fernández, Almudena (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (Espanya). Departamento de Mejora Genética Animal) ;
Muñoz, María (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (Espanya). Departamento de Mejora Genética Animal) ;
Noguera, José Luis (Institut de Recerca i Tecnologia Agroalimentàries. Departament de Genètica i Millora Animal) ;
Folch, Josep M. (Centre de Recerca en Agrigenòmica) ;
Fernández, Ana I. (Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (Espanya). Departamento de Mejora Genética Animal) ;
Universitat Autònoma de Barcelona.
Departament de Ciència Animal i dels Aliments
One of the major limitation for the application of QTL results in pig breeding and QTN identification has been the limited number of QTL effects validated in different animal material. The aim of the current work was to validate QTL regions through joint and specific genome wide association and haplotype analyses for growth, fatness and premier cut weights in three different genetic backgrounds, backcrosses based on Iberian pigs, which has a major role in the analysis due to its high productive relevance. [...]
2018 - 10.1371/journal.pone.0190184
PloS one, Vol. 13, Num. 3 (March 2018) , art. e0190184
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41 p, 1.8 MB |
Inheritance and QTL analysis of chilling and heat requirements for flowering in an interspecific almond x peach (Texas x Earlygold) F2 population
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Cantin, Celia M. (Institut de Recerca i Tecnologia Agroalimentàries) ;
Wang, Xin-Wei (Chinese Academy of Agricultural Sciences. Zhengzhou Fruit Research Institute) ;
Almira, Maria Jose (Universitat Autònoma de Barcelona) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ;
Eduardo, Iban (Centre de Recerca en Agrigenòmica)
Blooming in temperate fruit species is triggered by chilling and heat requirements (CR and HR), with a wide range of requirements within the same species. CR for flower bud dormancy release has become a limiting factor for geographical adaptation of fruit trees in warmer regions. [...]
2020 - 10.1007/s10681-020-02588-9
Euphytica, Vol. 216, issue 3 (March 2020) , art. 51
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11 p, 2.1 MB |
High-density genetic map and QTL analysis of soluble solid content, maturity date, and mealiness in peach using genotyping by sequencing
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Nuñez-Lillo, Gerardo (Universidad Andrés Bello. Centro de Biotecnología Vegetal) ;
Balladares, Cristóbal (Universidad Andrés Bello. Centro de Biotecnología Vegetal) ;
Pavez, Catalina (Universidad Andrés Bello. Centro de Biotecnología Vegetal) ;
Urra, Claudio (Universidad Andrés Bello. Centro de Biotecnología Vegetal) ;
Sanhueza, Dayan (Universidad Andrés Bello. Centro de Biotecnología Vegetal) ;
Vendramin, Elisa (Consiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria) ;
Dettori, Maria Teresa (Consiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ;
Verde, Ignazio (Consiglio per la Ricerca in Agricoltura e l'Analisi dell'Economia Agraria) ;
Blanco-Herrera, Francisca (Millennium Institute for Integrative Biology) ;
Campos-Vargas, Reinaldo (Universidad Andrés Bello. Centro de Biotecnología Vegetal) ;
Meneses, Claudio (Universidad Andrés Bello. Center for Genome Regulation)
Peach (Prunus persica) is one of the most important temperate fruit trees in the world, based on its production and cultivated area. Consumer acceptance is the principal objective of multiple breeding programs and it is dependent on many factors. [...]
2019 - 10.1016/j.scienta.2019.108734
Scientia Horticulturae, Vol. 257 (November 2019) , art. 108734
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16 p, 3.1 MB |
Expression QTL (eQTLs) Analyses Reveal Candidate Genes Associated With Fruit Flesh Softening Rate in Peach [Prunus persica (L.) Batsch]
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Carrasco-Valenzuela, Tomás (Universidad Andres Bello. Centro de Biotecnología Vegetal) ;
Muñoz-Espinoza, Claudia (Universidad Andres Bello. Centro de Biotecnología Vegetal) ;
Riveros, Aníbal (Universidad Andres Bello. Centro de Biotecnología Vegetal) ;
Pedreschi, Romina (Pontificia Universidad Católica de Valparaíso. Escuela de Agronomía) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ;
Campos-Vargas, Reinaldo (Universidad Andres Bello. Centro de Biotecnología Vegetal) ;
Meneses, Claudio (Universidad Andres Bello. Centro de Biotecnología Vegetal)
Significant differences in softening rate have been reported between melting flesh in peach and nectarine varieties. This trait seems to be controlled by several genes. We aimed to identify candidate genes involved in fruit softening rate by integrating quantitative trait loci (QTL) and expression QTL (eQTL) analyses, comparing siblings with contrasting softening rates. [...]
2019 - 10.3389/fpls.2019.01581
Frontiers in plant science, Vol. 10 (December 2019) , art. 1581
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17 p, 3.0 MB |
QTL mapping of melon fruit quality traits using a high-density GBS-based genetic map
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Pereira, Lara (Centre de Recerca en Agrigenòmica) ;
Ruggieri, Valentino (Centre de Recerca en Agrigenòmica) ;
Pérez, S. (Centre de Recerca en Agrigenòmica) ;
Alexiou, Konstantinos G. (Centre de Recerca en Agrigenòmica) ;
Fernández, Marta (Semillas Fitó, S.L) ;
Jahrmann, Torben (Semillas Fitó, S.L.) ;
Pujol Abajo, Marta (Centre de Recerca en Agrigenòmica) ;
Garcia-Mas, Jordi (Centre de Recerca en Agrigenòmica)
Background: Melon shows a broad diversity in fruit morphology and quality, which is still underexploited in breeding programs. The knowledge of the genetic basis of fruit quality traits is important for identifying new alleles that may be introduced in elite material by highly efficient molecular breeding tools. [...]
2018 - 10.1186/s12870-018-1537-5
BMC plant biology, Vol. 18 (2018) , art. 324
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