2026-09-16
12:13 |
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71 p, 6.1 MB |
Repression of ABA-responsive alternative splicing by an Arabidopsis SR protein relieves ABA inhibition of early plant growth
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Laloum, Tom (Gulbenkian Institute for Molecular Medicine) ;
Martín, Giomar (Centre de Rercerca en Agrogenòmica) ;
Lewinski, Martin (Bielefeld University) ;
Yanez, Romana J. R. (Gulbenkian Institute for Molecular Medicine) ;
Köster, Tino (Bielefeld University) ;
Paixão, Tiago (Gulbenkian Institute for Molecular Medicine) ;
Staiger, Dorothee (Bielefeld University) ;
Duque, Paula (Gulbenkian Institute for Molecular Medicine)
The phytohormone abscisic acid (ABA) inhibits postgermination growth under unfavorable conditions to delay the seedling's transition to the autotrophic stage and promote plant survival. Stress-induced ABA accumulation is well established to trigger extensive transcriptional changes, but it is becoming clear that ABA also relies on alternative splicing to enhance stress tolerance. [...]
2026 -  10.1093/plcell/koag127
The Plant cell, Vol. 38, Num. 6 (June 2026) , art. koag127
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2026-07-30
18:12 |
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18 p, 3.3 MB |
Synergistic regulation of abiotic stress adaptation by copper miRNAs miR398 and miR408 in melon
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Hernandez-Azurdia, Andrea Gabriela (Universitat de València. Institut de Biologia Integrativa de Sistemes) ;
Nuñez Salvador, Marta (Universitat de València. Institut de Biologia Integrativa de Sistemes) ;
Lozano-Ordaz, Javier (Universitat de València. Institut de Biologia Integrativa de Sistemes) ;
Lopez, Carmelo (Universitat Politècnica de València) ;
Martín-Hernández, Ana Montserrat (Centre de Recerca en Agrigenòmica) ;
Gomez, Gustavo (Universitat de València. Institut de Biologia Integrativa de Sistemes)
MicroRNAs (miRNAs) in general and miR398 and miR408 in particular have emerged as key regulators of plant adaptation to individual stress, yet their roles regulating the crop response to diverse unfavorable environments remain poorly explored. [...]
2026 - 10.1111/tpj.71061
The Plant journal, Vol. 127, Num. 2 (June 2026) , art. e71061
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2026-09-23
11:13 |
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7 p, 1.0 MB |
ResynPy : a software for selecting pairs of complementary inbred lines to resynthesize valuable heterozygous genotypes
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Alexiou, Konstantinos G. (Centre de Recerca en Agrigenòmica) ;
Eduardo, Iban (Institut de Recerca i Tecnologia Agroalimentàries) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica)
Background: Using cultivars based on a single, partly heterozygous, genotype is one of the bases of agriculture, frequently used in seed-propagated species such as vegetables and field crops (F1 hybrid varieties), and in most fruit trees and ornamentals (clonal varieties) that reproduce vegetatively. [...]
2025 - 10.1186/s12859-025-06279-x
BMC bioinformatics, Vol. 26, Num. 1 (December 2025) , art. 265
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2026-09-16
17:14 |
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15 p, 3.4 MB |
Glycosylated sterols enhance cold tolerance in tomato via membrane stabilization and jasmonate signaling
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Deng, Cuiyun (Centre de Recerca en Agrigenòmica) ;
Garcia-Molina, Antoni (Centre de Recerca en Agrigenòmica) ;
Gomez-Cadenas, Aurelio (Universitat Jaume I. Departament de Biologia, Bioquímica i Ciències Naturals) ;
Vives-Peris, Vicente (Universitat Jaume I. Departament de Biologia, Bioquímica i Ciències Naturals) ;
Alcázar, Rubén (Universitat de Barcelona. Departament de Biologia, Sanitat i Medi Ambient) ;
Ferrer, Albert (Centre de Recerca en Agrigenòmica) ;
Altabella Artigas, Teresa (Centre de Recerca en Agrigenòmica)
Free and glycosylated sterols play a central role in maintaining the structural integrity and proper functioning of the plasma membrane, which serves as the primary sensor of cold and initiates signaling cascades to mitigate chilling-induced damage. [...]
2025 - 10.1093/plphys/kiaf420
Plant physiology, Vol. 199, Num. 2 (October 2025) , art. kiaf420
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2026-07-30
16:13 |
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11 p, 2.0 MB |
Region-based segmental swapping of homologous enzymes for higher cadaverine production
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Kim, Seungjin (Pohang University of Science and Technology. Department of Chemical Engineering) ;
Ye, Dae-Yeol (Pohang University of Science and Technology. Department of Chemical Engineering) ;
Lim, Hyun Gyu (Inha University. Department of Biological Sciences and Bioengineering) ;
Noh, Myung Hyun (Korea Research Institute of Chemical Technology. Research Center for Bio-based Chemistry) ;
Yang, Jae-Seong (Centre de Recerca en Agrigenòmica) ;
Jung, Gyoo Yeol (Pohang University of Science and Technology. School of Interdisciplinary Bioscience and Bioengineering)
Background: Cadaverine, displaying potential in medicine, agriculture and polyamide production, is biologically produced through L-lysine decarboxylation. Considering the potential of the polyamide market, its biological production has been focused on with following diverse efforts to improve the production. [...]
2025 - 10.1186/s12934-025-02739-4
Microbial cell factories, Vol. 24, Num. 1 (December 2025) , art. 120
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2026-07-26
18:49 |
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17 p, 3.3 MB |
Comprehensive proteomic profiling of Cucumber mosaic virus infection : identifying key proteins and pathways involved in resistance and susceptibility in melon
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Real Tortosa, Núria (Centre de Recerca en Agrigenòmica) ;
Garcia-Molina, Antoni (Centre de Recerca en Agrigenòmica) ;
Stolze, Sara Christina (Max Planck Institute for Plant Breeding Research) ;
Harzen, Anne (Max Planck Institute for Plant Breeding Research) ;
Nakagami, Hirofumi (Max Planck Institute for Plant Breeding Research) ;
Martín-Hernández, Ana Montserrat (Centre de Recerca en Agrigenòmica)
Background: Melon (Cucumis melo L. ) is the model species of the Cucurbitaceae family and an important crop. However, its yield is primarily affected by viruses. Cucumber mosaic virus (CMV) is particularly significant due to its broad host range, capable of infecting over 100 plant families. [...]
2025 - 10.1186/s12870-025-06464-3
BMC plant biology, Vol. 25, Num. 1 (December 2025) , art. 434
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2026-07-15
19:58 |
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16 p, 1.6 MB |
Regulatory structural variations upstream of a NAC transcription factor control fruit maturity timing in peach
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Giulio Tagliabue, Alessandro (University of Milan. Department of Agricultural and Environmental Sciences) ;
Friel, James (University of Milan. Department of Agricultural and Environmental Sciences) ;
Chiozzotto, Remo (University of Milan. Department of Agricultural and Environmental Sciences) ;
Baccichet, Irina (University of Milan. Department of Agricultural and Environmental Sciences) ;
Linge, Cassia da Silva (University of Milan. Department of Agricultural and Environmental Sciences) ;
Calastri, Elisa (University of Milan. Department of Agricultural and Environmental Sciences) ;
Biffi, Gianluca (University of Milan. Department of Agricultural and Environmental Sciences) ;
Zaracho, Nathalia (Centre de Recerca en Agrigenòmica) ;
Gattolin, Stefano (Institute of Agricultural Biology and Biotechnology) ;
Micali, Sabrina (CREA. Research Centre for Olive. Fruit and Citrus crops) ;
Eduardo, Iban (Centre de Recerca en Agrigenòmica) ;
Bassi, Daniele (University of Milan. Department of Agricultural and Environmental Sciences) ;
Rossini, Laura (University of Milan. Department of Agricultural and Environmental Sciences) ;
Cirilli, Marco (University of Milan. Department of Agricultural and Environmental Sciences)
Fruit maturity date is a key developmental trait in fruit trees, as it determines the timing of when fruits enter the ripening phase, thereby shaping the harvest calendar and fruit quality. In peach, ripening time varies over several months, yet the genetic and regulatory basis underlying this extensive phenological diversity has remained largely unresolved. [...]
2026 - 10.1093/jxb/erag210
Journal of experimental botany, April 2026, art. erag210
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2026-07-22
13:12 |
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2026-07-30
17:12 |
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13 p, 1.8 MB |
Integrating whole-genome resequencing and machine learning to refine QTL analysis for fruit quality traits in peach
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Fan, Jiaqi (Chinese Academy of Agricultural Sciences. Zhengzhou Fruit Research Institute) ;
Wu, Jinlong (Chinese Academy of Agricultural Sciences. Zhongyuan Research Center) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ;
Li, Yong (Chinese Academy of Agricultural Sciences. Zhengzhou Fruit Research Institute) ;
Cao, Ke (Chinese Academy of Agricultural Sciences. Zhengzhou Fruit Research Institute) ;
Wang, Lirong (Chinese Academy of Agricultural Sciences. Western Research Institute)
Increasing marker density results in better map coverage and efficiency of genetic analysis. Here, we resequenced a large (N = 235) F1 progeny from two distant peach cultivars, 'Zhongyou Pan #9' and 'September Free', and constructed two parental maps (1:1 segregations) and one combined map (1:2:1 segregations) with 134 277 SNPs. [...]
2025 - 10.1093/hr/uhaf087
Horticulture research, Vol. 12, Num. 7 (July 2025) , art. uhaf087
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2026-07-30
18:12 |
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19 p, 12.7 MB |
Panvariome and pangenome of 1,020 global peach accessions shed light on evolution patterns, hidden natural variations, and efficient gene discovery
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Li, Yong (Chinese Academy of Agricultural Sciences) ;
Arús i Gorina, Pere (Centre de Recerca en Agrigenòmica) ;
Wu, Jinlong (Chinese Academy of Agricultural Sciences) ;
Zhu, Gengrui (Chinese Academy of Agricultural Sciences) ;
Fang, Weichao (Chinese Academy of Agricultural Sciences) ;
Chen, Changwen (Chinese Academy of Agricultural Sciences) ;
Wang, Xinwei (Chinese Academy of Agricultural Sciences) ;
Cao, Ke (Chinese Academy of Agricultural Sciences) ;
Wang, Lirong (Chinese Academy of Agricultural Sciences)
Natural variations are the foundation of crop improvement. However, genomic variability remains largely understudied. Here, we present the full-spectrum integrated panvariome and pangenome of 1,020 peach accessions, including 10. [...]
2025 - 10.1016/j.molp.2025.04.009
Molecular plant, Vol. 18, Num. 6 (June 2025) , p. 995-1013
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